MTP Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Achromobacter xylosoxidans
Achromobacter piechaudii
Achromobacter ruhlandii
Achromobacter insolitus
Achromobacter denitrificans
Achromobacter spanius
Achromobacter marplatensis
Achromobacter pulmonis
Achromobacter mucicolens
Achromobacter animicus
Achromobacter insuavis
Achromobacter dolens
Achromobacter anxifer
Achromobacter aegrifaciens
Achromobacter pestifer
Achromobacter kerstersii
Achromobacter deleyi
Achromobacter agilis
Bordetella hinzii
Bordetella trematum
Bordetella ansorpii
Bordetella tumulicola
Bordetella tumbae
Bordetella muralis
Bordetella pseudohinzii
Bordetella avium
NEVU_s
NEVR_s
NEVN_s
FKIF_s
CP021111_s
FJ204460_s
FJ849600_s
Advenella faeciporci
Advenella alkanexedens
Advenella kashmirensis subsp. kashmirensis
Advenella kashmirensis subsp. methylica
Pigmentiphaga kullae
Advenella incenata
Advenella mimigardefordensis
Pigmentiphaga litoralis
Pigmentiphaga soli
Pigmentiphaga aceris
KI650982_s
Alcaligenes faecalis subsp. faecalis
Alcaligenes faecalis subsp. parafaecalis
Alcaligenes faecalis subsp. phenolicus
Alcaligenes aquatilis
Alcaligenes pakistanensis
Alcaligenes endophyticus
AKMR_s
Bordetella flabilis
Bordetella bronchialis
Bordetella sputigena
Bordetella pertussis
Bordetella parapertussis
Bordetella bronchiseptica
Bordetella petrii
JAEP_s
JAEJ_s
Castellaniella defragrans
Castellaniella denitrificans
Castellaniella caeni
Castellaniella ginsengisoli
Castellaniella daejeonensis
Castellaniella hirudinis
Eiseniicola composti
Candidimonas bauzanensis
Kerstersia gyiorum
Kerstersia similis
Orrella dioscoreae
KB907784_s
Kinetoplastibacterium blastocrithidii
Kinetoplastibacterium oncopeltii
Kinetoplastibacterium galatii
Paenalcaligenes hominis
Paenalcaligenes hermetiae
Paralcaligenes ginsengisoli
Pelistega suis
Pusillimonas ginsengisoli
Pusillimonas soli
Pusillimonas harenae
Burkholderia alpina
EU150276_s
Burkholderia gladioli
Burkholderia plantarii
Burkholderia ambifaria
Burkholderia oklahomensis
Burkholderia diffusa
Burkholderia puraquae
Burkholderia cepacia
Burkholderia mallei
Burkholderia pseudomallei
Burkholderia glumae
Burkholderia vietnamiensis
Burkholderia pyrrocinia
Burkholderia thailandensis
Burkholderia stabilis
Burkholderia ubonensis
Burkholderia anthina
Burkholderia cenocepacia
Burkholderia seminalis
Burkholderia metallica
Burkholderia latens
Burkholderia arboris
Burkholderia lata
Burkholderia contaminans
Burkholderia stagnalis
Burkholderia territorii
Burkholderia singularis
Pseudomonas mesoacidophila
JJOA_s
Caballeronia glathei
Caballeronia telluris
Caballeronia terrestris
Caballeronia humi
Caballeronia choica
Caballeronia arationis
Burkholderia multivorans
Burkholderia rinojensis
Burkholderia pseudomultivorans
jgi.1071268_s
Caballeronia jiangsuensis
Caballeronia megalochromosomata
Caballeronia grimmiae
Caballeronia cordobensis
Caballeronia temeraria
Caballeronia peredens
Caballeronia hypogeia
Caballeronia pedi
Caballeronia fortuita
Caballeronia catudaia
Caballeronia arvi
Burkholderia calva
AP013058_s
Caballeronia udeis
Caballeronia sordidicola
Paraburkholderia sartisoli
LMPF_s
CP014505_s
Caballeronia zhejiangensis
Caballeronia turbans
Caballeronia ptereochthonis
Caballeronia glebae
Caballeronia calidae
Caballeronia concitans
Pandoraea apista
Pandoraea sputorum
Pandoraea pulmonicola
Pandoraea pnomenusa
Pandoraea norimbergensis
Pandoraea vervacti
Pandoraea oxalativorans
Pandoraea faecigallinarum
Pandoraea terrae
NGUR_s
Paraburkholderia endofungorum
Paraburkholderia rhizoxinica
Paraburkholderia ferrariae
Paraburkholderia paradisi
Paraburkholderia graminis
Paraburkholderia ginsengisoli
Paraburkholderia caledonica
Paraburkholderia phytofirmans
Paraburkholderia dilworthii
Paraburkholderia xenovorans
Paraburkholderia sediminicola
Paraburkholderia phenoliruptrix
Paraburkholderia megapolitana
Paraburkholderia fungorum
Paraburkholderia bryophila
Paraburkholderia terricola
Paraburkholderia phenazinium
Paraburkholderia pallidirosea
Paraburkholderia caffeinilytica
Paraburkholderia dipogonis
Paraburkholderia insulsa
Paraburkholderia kirstenboschensis
Paraburkholderia rhynchosiae
Paraburkholderia metrosideri
FNTG_s
CP022990_s
CP002218_s
JH603159_s
FSRU_s
FSRM_s
PAC000248_s
Paraburkholderia nodosa
GQ402779_s
Paraburkholderia oxyphila
Paraburkholderia solisilvae
Paraburkholderia rhizosphaerae
Paraburkholderia humisilvae
Paraburkholderia caballeronis
Paraburkholderia acidipaludis
CP018812_s
Paraburkholderia silvatlantica
Paraburkholderia mimosarum
Paraburkholderia heleia
Paraburkholderia hiiakae
Paraburkholderia peleae
FJ434114_s
Paraburkholderia sprentiae
Paraburkholderia kururiensis
Paraburkholderia tuberum
Paraburkholderia diazotrophica
Paraburkholderia piptadeniae
CP002013_s
Paraburkholderia susongensis
Paraburkholderia monticola
MSDV_s
Paraburkholderia terrae
Paraburkholderia phymatum
Paraburkholderia hospita
Paraburkholderia caribensis
Paraburkholderia sabiae
Paraburkholderia caryophylli
Paraburkholderia ginsengiterrae
Paraburkholderia azotifigens
Burkholderia dolosa
Burkholderia humptydooensis
AY963445_s
Paraburkholderia tropica
Paraburkholderia bannensis
Paraburkholderia metalliresistens
Acidovorax avenae
Acidovorax oryzae
Acidovorax citrulli
Acidovorax cattleyae
Caenimonas terrae
Acidovorax delafieldii
Acidovorax temperans
Acidovorax defluvii
CP021366_s
JN398062_s
HQ178927_s
Acidovorax facilis
Acidovorax radicis
Leptothrix mobilis
Limnohabitans parvus
Hydrogenophaga crassostreae
CP016447_s
AGTS_s
DQ520167_s
Acidovorax konjaci
Acidovorax wautersii
Xylophilus ampelinus
Xenophilus azovorans
Ramlibacter tataouinensis
Simplicispira metamorpha
LMQL_s
AM411934_s
AY947979_s
Albidiferax ferrireducens
Rhodoferax saidenbachensis
JX224059_s
EU978826_s
FNJA_s
NOXW_s
Aquabacterium parvum
JRKM_s
Aquincola tertiaricarbonis
Acidovorax lacteus
Azohydromonas lata
Azohydromonas australica
Azohydromonas riparia
Azohydromonas ureilytica
Zhizhongheella caldifontis
Aquabacterium limnoticum
Caldimonas meghalayensis
CM001438_s
Caldimonas manganoxidans
Caldimonas taiwanensis
Comamonas aquatica
Comamonas kerstersii
Comamonas terrae
Comamonas jiangduensis
Comamonas phosphati
Aquabacterium fontiphilum
Delftia litopenaei
AB286599_s
CU920629_s
Comamonas odontotermitis
Comamonas zonglianii
Comamonas humi
Comamonas sediminis
Comamonas terrigena
Comamonas granuli
Comamonas serinivorans
Comamonas faecalis
Diaphorobacter nitroreducens
Diaphorobacter oryzae
Diaphorobacter polyhydroxybutyrativorans
Ottowia pentelensis
Ottowia beijingensis
Ideonella dechloratans
Alicycliphilus denitrificans
Extensimonas vulgaris
Vitreoscilla filiformis
Acidovorax caeni
Brachymonas chironomi
AB021357_s
JN713433_s
EF063629_s
AF234720_s
AB286528_s
Comamonas testosteroni
Comamonas nitrativorans
Comamonas denitrificans
Comamonas composti
Comamonas thiooxydans
BAEC_s
Corticibacter populi
NSJF_s
NSJD_s
Curvibacter delicatus
Acidovorax soli
CP003872_s
NOIG_s
Curvibacter gracilis
Curvibacter lanceolatus
Delftia tsuruhatensis
Rhizobacter dauci
Rhizobacter fulvus
Rhizobacter bergeniae
Rhizobacter gummiphilus
Rhizobacter profundi
Delftia acidovorans
Delftia lacustris
Delftia rhizosphaerae
Mitsuaria chitosanitabida
Paucibacter toxinivorans
Acidovorax anthurii
Acidovorax valerianellae
Paucibacter oligotrophus
Mitsuaria noduli
Roseateles aquatilis
Curvibacter fontanus
KQ483358_s
LMLZ_s
LMPT_s
DF238959_s
CP011515_s
HQ003410_s
Diaphorobacter aerolatus
Diaphorobacter ruginosibacter
Giesbergeria voronezhensis
Giesbergeria sinuosa
Giesbergeria giesbergeri
Giesbergeria anulus
Giesbergeria kuznetsovii
Hydrogenophaga aquatica
Hydrogenophaga soli
AP014568_s
JUEA_s
BAWN_s
AP014569_s
Hydrogenophaga flava
Hydrogenophaga pseudoflava
Hydrogenophaga palleronii
Hydrogenophaga defluvii
Hydrogenophaga atypica
Hydrogenophaga caeni
Hydrogenophaga bisanensis
Hydrogenophaga luteola
Hydrogenophaga laconesensis
Hydrogenophaga intermedia
MIYM_s
LMIE_s
CP016449_s
Hylemonella gracilis
JEMG_s
Lampropedia hyalina
Lampropedia puyangensis
Leptothrix cholodnii
AJ964894_s
Limnohabitans australis
DQ520187_s
EU801144_s
AY212631_s
Malikia granosa
Malikia spinosa
Methylibium petroleiphilum
Piscinibacter aquaticus
LMDY_s
PAC001918_s
EF515904_s
Oryzisolibacter propanilivorax
Pelomonas puraquae
Ideonella paludis
AB076847_s
Pelomonas saccharophila
Comamonas koreensis
Pelomonas aquatica
Comamonas piscis
Kinneretia asaccharophila
Limnohabitans planktonicus
CP011774_s
JN679217_s
EF111109_s
Polaromonas aquatica
Polaromonas jejuensis
CP000316_s
FNHX_s
AKIV_s
JIBH_s
Polaromonas naphthalenivorans
Polaromonas cryoconiti
Polaromonas glacialis
FPBM_s
AB199574_s
Pseudacidovorax intermedius
AB195164_s
HQ158663_s
Pseudorhodoferax soli
Pseudorhodoferax caeni
Pseudorhodoferax aquiterrae
Ramlibacter ginsenosidimutans
Ramlibacter monticola
Ramlibacter alkalitolerans
Variovorax dokdonensis
DQ354711_s
Ramlibacter henchirensis
Ramlibacter solisilvae
Ramlibacter rhizophilus
LMMV_s
Rhodoferax fermentans
Rhodoferax antarcticus
CP019236_s
CP015698_s
Roseateles depolymerans
Roseateles terrae
Rubrivivax gelatinosus
Rubrivivax benzoatilyticus
Schlegelella thermodepolymerans
Schlegelella aquatica
Simplicispira psychrophila
Simplicispira limi
Simplicispira piscis
Limnohabitans curvus
Leptothrix discophora
EF580985_s
Sphaerotilus montanus
Sphaerotilus hippei
Sphaerotilus natans subsp. natans
Sphaerotilus natans subsp. sulfidivorans
Variovorax boronicumulans
Variovorax ginsengisoli
Variovorax paradoxus
Variovorax gossypii
Variovorax guangxiensis
CP003911_s
Variovorax soli
Variovorax defluvii
Variovorax humicola
Xenophilus aerolatus
Xenophilus arseniciresistens
Ottowia thiooxydans
D84645_s
EU801607_s
EU735703_s
Actimicrobium antarcticum
DQ450176_s
AJ863277_s
JF833519_s
AB486719_s
Collimonas pratensis
Collimonas arenae
PDBX_s
CP009962_s
Duganella radicis
FODC_s
GU563773_s
Duganella zoogloeoides
Duganella phyllosphaerae
Duganella sacchari
Pseudoduganella danionis
LMLM_s
FNEQ_s
AJ575697_s
Glaciimonas immobilis
Glaciimonas singularis
Glaciimonas frigoris
Paraherbaspirillum soli
CP002745_s
Herbaspirillum huttiense subsp. huttiense
Herbaspirillum huttiense subsp. putei
Herbaspirillum frisingense
Herbaspirillum chlorophenolicum
Herbaspirillum aquaticum
AJ012069_s
CP018845_s
Herbaspirillum lusitanum
Herbaspirillum autotrophicum
Herbaspirillum hiltneri
Herminiimonas arsenicoxydans
Herminiimonas saxobsidens
Herminiimonas glaciei
Herminiimonas contaminans
AVCC_s
FJ624877_s
Janthinobacterium lividum
Janthinobacterium agaricidamnosum
Janthinobacterium svalbardensis
LBCO_s
JQNP_s
JFYR_s
CP019510_s
CP011319_s
DQ537532_s
AJ582187_s
EU536428_s
Massilia aerilata
Massilia consociata
Massilia tieshanensis
Massilia arvi
Massilia norwichensis
Massilia putida
Massilia pinisoli
Massilia agilis
Massilia terrae
Massilia solisilvae
Massilia albidiflava
Massilia umbonata
Massilia aurea
Massilia niastensis
Massilia oculi
EF516371_s
Massilia brevitalea
Massilia niabensis
Massilia jejuensis
Massilia alkalitolerans
Massilia suwonensis
Massilia varians
Massilia yuzhufengensis
Massilia neuiana
Massilia phosphatilytica
Massilia chloroacetimidivorans
FJ375473_s
Massilia dura
Massilia plicata
Massilia lutea
Massilia lurida
Massilia buxea
Massilia eurypsychrophila
Massilia psychrophila
Massilia haematophila
Massilia kyonggiensis
Massilia agri
Massilia timonae
Massilia namucuonensis
Massilia glaciei
FAOS_s
CP024608_s
FQWU_s
EU801571_s
Noviherbaspirillum psychrotolerans
Noviherbaspirillum suwonense
Noviherbaspirillum soli
Noviherbaspirillum canariense
Noviherbaspirillum aurantiacum
Noviherbaspirillum massiliense
Noviherbaspirillum autotrophicum
Noviherbaspirillum agri
Oxalicibacterium flavum
Oxalicibacterium horti
Oxalicibacterium faecigallinarum
Oxalicibacterium solurbis
Herbaspirillum seropedicae
Herbaspirillum rhizosphaerae
Herbaspirillum denitrificans
Herminiimonas fonticola
CP022736_s
LMHZ_s
GU295961_s
PAC001919_s
PAC002036_s
AB696494_s
EU362137_s
Oxalobacter formigenes
KI392030_s
Pseudoduganella violaceinigra
Pseudoduganella eburnea
LMFZ_s
Rugamonas rubra
KB467824_s
AMWD_s
Undibacterium macrobrachii
JN790866_s
Undibacterium pigrum
Undibacterium squillarum
HQ111154_s
Undibacterium terreum
Undibacterium jejuense
Undibacterium seohonense
Undibacterium aquatile
Undibacterium danionis
Undibacterium arcticum
Undibacterium amnicola
HQ752460_s
Parasutterella excrementihominis
LARN_s
Sutterella stercoricanis
JH815513_s
PAC001429_s
Derxia gummosa
Derxia lacustris
Lautropia mirabilis
JN713340_s
Cupriavidus necator
Cupriavidus basilensis
Cupriavidus numazuensis
JQLI_s
CP006668_s
BBQM_s
ALOU_s
Cupriavidus oxalaticus
Cupriavidus alkaliphilus
Cupriavidus yeoncheonensis
Cupriavidus pauculus
Cupriavidus campinensis
Cupriavidus metallidurans
Cupriavidus respiraculi
Cupriavidus plantarum
CP017749_s
Cupriavidus taiwanensis
Cupriavidus nantongensis
Polynucleobacter cosmopolitanus
Polynucleobacter victoriensis
Polynucleobacter yangtzensis
Polynucleobacter sinensis
Polynucleobacter duraquae
Polynucleobacter asymbioticus
Polynucleobacter sphagniphilus
Polynucleobacter aenigmaticus
Polynucleobacter wuianus
CP004348_s
Ralstonia pickettii
JYOB_s
JFZG_s
FOWV_s
CP001068_s
Ralstonia solanacearum
Ralstonia mannitolilytica
Ralstonia pseudosolanacearum
Ralstonia syzygii subsp. syzygii
Ralstonia syzygii subsp. celebesensis
Ralstonia syzygii subsp. indonesiensis
Ralstonia insidiosa
Thiomonas intermedia
Thiomonas perometabolis
Ferritrophicum radicicola
DQ837229_s
Ferriphaselus amnicola
JQKP_s
EU937884_s
Nitrotoga arctica
EF064167_s
AY013698_s
DQ228367_s
AY013694_s
FR667814_s
AF351229_s
EF520481_s
AB722230_s
GU572364_s
EF589997_s
DQ386858_s
EF589973_s
Methylobacillus flagellatus
Methylobacillus methanolivorans
Methylobacillus glycogenes
Methylobacillus gramineus
Methylophilus leisingeri
Methylophilus rhizosphaerae
Methylophilus flavus
Methylophilus luteus
Methylophilus methylotrophus
Methylophilus quaylei
Methylotenera versatilis
KB910519_s
KB913035_s
JUHH_s
JQMG_s
EF562573_s
AY212692_s
JN869132_s
DQ228415_s
AB179689_s
JUGF_s
ARWF_s
HM127569_s
Methylovorus glucosotrophus
Methylovorus mays
Methylovorus menthalis
Methylobacillus arboreus
Methylobacillus rhizosphaerae
MCAW_s
AJ318113_s
CP011001_s
ABXG_s
Alysiella filiformis
Alysiella crassa
Amantichitinum ursilacus
BBFD_s
Aquaspirillum serpens
Aquaspirillum soli
Aquitalea magnusonii
Aquitalea denitrificans
Aquitalea pelogenes
Chitinimonas prasina
Chitinimonas viridis
Chromobacterium aquaticum
Chromobacterium haemolyticum
Chromobacterium amazonense
Chromobacterium rhizoryzae
Chromobacterium alkanivorans
Chromobacterium piscinae
Chromobacterium vaccinii
Chromobacterium subtsugae
Chromobacterium sphagni
Chromobacterium violaceum
Chromobacterium pseudoviolaceum
Eikenella corrodens
LXSL_s
Gulbenkiania mobilis
Gulbenkiania indica
Kingella kingae
Kingella negevensis
Kingella potus
AY005028_s
AY064548_s
Leeia oryzae
AB286349_s
Microvirgula aerodenitrificans
Microvirgula curvata
Neisseria elongata subsp. elongata
Neisseria elongata subsp. glycolytica
Neisseria elongata subsp. nitroreducens
Neisseria animalis
Neisseria canis
Neisseria weaveri
Neisseria wadsworthii
Kingella denitrificans
LGYH_s
Neisseria lactamica
AEPI_s
Neisseria meningitidis
Neisseria sicca
Neisseria mucosa
Neisseria macacae
Neisseria polysaccharea
Neisseria flava
Morococcus cerebrosus
AEPH_s
Neisseria skkuensis
PAC001340_s
Neisseria subflava
Neisseria perflava
Neisseria cinerea
Neisseria zoodegmatis
Neisseria animaloris
AM412761_s
AM408792_s
Pseudogulbenkiania gefcensis
AP012224_s
Pseudogulbenkiania subflava
AZUR_s
Rivicola pingtungensis
CP019509_s
Silvimonas terrae
Silvimonas iriomotensis
Silvimonas amylolytica
AY093465_s
JF128022_s
Uruburuella suis
Uruburuella testudinis
Vitreoscilla stercoraria
LN898215_s
Vogesella amnigena
Vogesella facilis
Vogesella oryzae
Vogesella indigofera
Vogesella fluminis
Vogesella alkaliphila
Vogesella perlucida
Vogesella mureinivorans
Nitrosomonas ureae
CP002552_s
Nitrosospira briensis
Nitrosospira multiformis
Nitrosospira lacus
Nitrosospira tenuis
JXQM_s
FOHI_s
FOBH_s
FNKY_s
Azonexus caeni
AB608703_s
AB608687_s
Azonexus hydrophilus
MTHD_s
DQ088747_s
Dechloromonas denitrificans
Dechloromonas hortensis
JEMY_s
FLQX_s
Azospira restricta
AY691423_s
Azoarcus tolulyticus
Azoarcus evansii
Azoarcus anaerobius
Azoarcus toluclasticus
Azoarcus buckelii
Azoarcus taiwanensis
HM587246_s
AP012304_s
DQ517100_s
JQ825082_s
JQ824926_s
AB049763_s
FJ516802_s
Thauera butanivorans
Thauera linaloolentis
Thauera selenatis
Thauera mechernichensis
Thauera chlorobenzoica
Thauera phenylacetica
Thauera aminoaromatica
Thauera humireducens
DQ018811_s
Uliginosibacterium gangwonense
Uliginosibacterium paludis
Zoogloea oryzae
HQ436491_s
Zoogloea ramigera
Zoogloea caeni
AF035051_s
JN391860_s
JN391660_s
Zoogloea resiniphila
MWUM_s
Azovibrio restrictus
EU266828_s
Sulfuricella denitrificans
DF967542_s
Sulfuriferula multivorans
Sulfuriferula plumbiphila
CP021138_s
FJ478938_s
GQ397059_s
EF018568_s
LQZA_s
LJWX_s
EU669638_s
EF516867_s
GU454976_s
CU924961_s
PAC001907_s
JQ978566_s
PAC002054_s
PAC002001_s
AB672266_s
EU193045_s
AY921788_s
PAC001921_s
GQ263935_s
PAC002247_s
EF032745_s
PAC002540_s
HM445381_s
AM990454_s
PAC002583_s
FJ810576_s
FR667788_s
JF703397_s
FQ658944_s
Methyloversatilis universalis
Methyloversatilis discipulorum
KB900539_s
CP016448_s
ARVV_s
Sterolibacterium denitrificans
Y09967_s
JQ668544_s
AB186832_s
FJ769462_s
AB240500_s
AB600426_s
AB552905_s
FJ660543_s
DQ836749_s
DQ836750_s
FQ660083_s
Sulfuritortus calidifontis
GQ921461_s
Thiobacillus thioparus
CP000116_s
EU676422_s
EU266782_s
DQ984604_s
AY945878_s
AB630465_s
AY212644_s