MTP Taxonomy
This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
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Alicyclobacillus acidocaldarius subsp. acidocaldarius 
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Alicyclobacillus acidocaldarius subsp. rittmannii
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Alicyclobacillus hesperidum
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Alicyclobacillus sacchari
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Aeribacillus pallidus
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Aeribacillus composti
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Alkalibacillus salilacus
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Alkalibacillus halophilus
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Alkalibacillus almallahensis
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Anoxybacillus eryuanensis
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Anoxybacillus mongoliensis
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Anoxybacillus flavithermus subsp. flavithermus
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Anoxybacillus flavithermus subsp. yunnanensis
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Anoxybacillus gonensis
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Anoxybacillus kamchatkensis
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Anoxybacillus rupiensis
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Anoxybacillus geothermalis
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Anoxybacillus voinovskiensis
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Anoxybacillus contaminans
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Anoxybacillus amylolyticus
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Bacillus cereus
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Bacillus mycoides
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Bacillus thuringiensis
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Bacillus pseudomycoides
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Bacillus toyonensis
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Bacillus wiedmannii
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Bacillus tropicus
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Bacillus proteolyticus
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Bacillus paranthracis
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Bacillus paramycoides
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Bacillus pacificus
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Bacillus nitratireducens
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Bacillus mobilis
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Bacillus luti
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Bacillus albus
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Bacillus anthracis
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JMQC_s
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JH792383_s
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JH792148_s
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JH791996_s
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JH791984_s
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CP013274_s
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CM000733_s
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Bacillus cihuensis
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Bacillus huizhouensis
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Bacillus coagulans
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CP003056_s
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Bacillus drentensis
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FXWM_s
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Bacillus endophyticus
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Bacillus filamentosus
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Bacillus gobiensis
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Bacillus capparidis
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Bacillus gottheilii
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Bacillus mesophilum
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Bacillus indicus
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Bacillus cibi
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Bacillus jeotgali
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Bacillus subterraneus
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Bacillus boroniphilus
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Bacillus thioparans
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Bacillus selenatarsenatis
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Bacillus licheniformis
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Bacillus sonorensis
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Bacillus paralicheniformis
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Bacillus glycinifermentans
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Bacillus haynesii
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Bacillus luciferensis
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Bacillus acidiceler
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Bacillus marisflavi
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LDWH_s
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Bacillus massilioalgeriensis
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CP012602_s
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Bacillus megaterium
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Bacillus aryabhattai
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Bacillus novalis
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Bacillus vireti
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Bacillus oceanisediminis
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LGUF_s
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CP015506_s
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Bacillus oleronius
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Bacillus farraginis
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Bacillus pumilus
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Bacillus safensis
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Bacillus altitudinis
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Bacillus xiamenensis
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Bacillus zhangzhouensis
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Bacillus australimaris
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LJIY_s
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Bacillus simplex
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Bacillus muralis
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Bacillus butanolivorans
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Brevibacterium frigoritolerans
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Bacillus solani
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Bacillus ciccensis
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Bacillus praedii
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Bacillus songklensis
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Bacillus thaonhiensis
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Bacillus fengqiuensis
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Bacillus subtilis subsp. subtilis
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Bacillus subtilis subsp. spizizenii
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Bacillus subtilis subsp. inaquosorum
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Bacillus subtilis subsp. stercoris
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Bacillus amyloliquefaciens
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Bacillus atrophaeus
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Bacillus mojavensis
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Bacillus vallismortis
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Bacillus velezensis
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Bacillus tequilensis
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Bacillus siamensis
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Bacillus nakamurai
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Bacillus halotolerans
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Bacillus thermolactis
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Bacillus kokeshiiformis
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Fictibacillus barbaricus
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Fictibacillus arsenicus
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Fictibacillus phosphorivorans
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Fictibacillus nanhaiensis
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Fictibacillus halophilus
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Geobacillus stearothermophilus
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Geobacillus lituanicus
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Geobacillus subterraneus subsp. subterraneus
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Geobacillus subterraneus subsp. aromaticivorans
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Geobacillus thermodenitrificans subsp. thermodenitrificans
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Geobacillus thermodenitrificans subsp. calidus
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Geobacillus thermoleovorans
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Geobacillus kaustophilus
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Geobacillus vulcani
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Geobacillus toebii
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Geobacillus galactosidasius
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Gracilibacillus saliphilus
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Gracilibacillus thailandensis
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Halobacillus halophilus
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Halobacillus alkaliphilus
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Halobacillus trueperi
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Halobacillus aidingensis
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Jeotgalibacillus alimentarius
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Jeotgalibacillus malaysiensis
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Marinococcus halophilus
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Marinococcus luteus
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Marinococcus tarijensis
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Oceanobacillus oncorhynchi subsp. oncorhynchi
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Oceanobacillus oncorhynchi subsp. incaldanensis
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Bacillus oshimensis
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Bacillus murimartini
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Bacillus lehensis
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Bacillus plakortidis
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Bacillus hunanensis
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Pontibacillus chungwhensis
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Pontibacillus salipaludis
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Salimicrobium album
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Salimicrobium salexigens
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Salimicrobium jeotgali
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Bacillus clarkii
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Bacillus polygoni
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Bacillus daqingensis
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Bacillus luteus
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Salisediminibacterium halotolerans
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Salisediminibacterium haloalkalitolerans
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Tepidibacillus decaturensis
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Tepidibacillus infernus
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Terribacillus aidingensis
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LT727828_s
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Terribacillus saccharophilus
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Terribacillus goriensis
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Thalassobacillus devorans
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Thalassobacillus cyri
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Virgibacillus alimentarius
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Virgibacillus campisalis
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Virgibacillus dokdonensis
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Virgibacillus chiguensis
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Virgibacillus halodenitrificans
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CP007161_s
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Virgibacillus marismortui
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Virgibacillus olivae
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Virgibacillus salarius
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Virgibacillus salinus
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Virgibacillus subterraneus
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Virgibacillus litoralis
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Exiguobacterium acetylicum
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Exiguobacterium indicum
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Exiguobacterium enclense
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Exiguobacterium antarcticum
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Exiguobacterium soli
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Exiguobacterium marinum
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Exiguobacterium aestuarii
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Exiguobacterium profundum
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Exiguobacterium sibiricum
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Exiguobacterium artemiae
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Brochothrix thermosphacta
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Brochothrix campestris
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Listeria fleischmannii subsp. fleischmannii
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Listeria fleischmannii subsp. coloradonensis
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Listeria ivanovii subsp. ivanovii
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Listeria ivanovii subsp. londoniensis
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Listeria monocytogenes
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Listeria innocua
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Listeria marthii
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CP007600_s
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CP001175_s
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Listeria riparia
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Listeria booriae
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Listeria rocourtiae
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Listeria weihenstephanensis
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Listeria grandensis
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Listeria cornellensis
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Listeria newyorkensis
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Brevibacillus brevis
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Brevibacillus formosus
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Brevibacillus choshinensis
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Brevibacillus nitrificans
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Paenibacillus amylolyticus
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Paenibacillus xylanexedens
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Paenibacillus apis
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KC158472_s
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Paenibacillus cucumis
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Paenibacillus intestini
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Paenibacillus favisporus
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Paenibacillus cineris
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Paenibacillus rhizosphaerae
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Paenibacillus gorillae
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Paenibacillus radicis
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Paenibacillus herberti
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LT629764_s
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Paenibacillus hordei
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Paenibacillus nicotianae
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Paenibacillus lacus
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AB362821_s
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Paenibacillus macquariensis subsp. macquariensis
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Paenibacillus macquariensis subsp. defensor
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Paenibacillus antarcticus
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Paenibacillus massiliensis
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Paenibacillus panacisoli
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Paenibacillus polymyxa
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Paenibacillus jamilae
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Paenibacillus shenyangensis
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Paenibacillus dauci
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Paenibacillus tylopili
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Paenibacillus tundrae
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Paenibacillus tyraminigenes
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Paenibacillus aquistagni
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Bhargavaea cecembensis
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Bhargavaea beijingensis
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Bhargavaea indica
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Bacillus cecembensis
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CP024123_s
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Chryseomicrobium imtechense
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Chryseomicrobium palamuruense
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Lysinibacillus composti
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Lysinibacillus alkaliphilus
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Lysinibacillus sphaericus
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Lysinibacillus mangiferihumi
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Lysinibacillus xylanilyticus
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MDDN_s
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LITM_s
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Planococcus citreus
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Planococcus rifietoensis
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Planococcus donghaensis
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Planococcus halocryophilus
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Planococcus kocurii
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Planococcus faecalis
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Planococcus maritimus
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LTZG_s
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Psychrobacillus psychrodurans
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Psychrobacillus psychrotolerans
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Solibacillus silvestris
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Solibacillus isronensis
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Solibacillus kalamii
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Sporosarcina ureae
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CP015348_s
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Viridibacillus arvi
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Viridibacillus arenosi
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Sporolactobacillus inulinus
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Sporolactobacillus terrae
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Sporolactobacillus nakayamae subsp. nakayamae
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Sporolactobacillus nakayamae subsp. racemicus
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Abyssicoccus albus
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Auricoccus indicus
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Jeotgalicoccus halophilus
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Jeotgalicoccus aerolatus
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Jeotgalicoccus marinus
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Jeotgalicoccus huakuii
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Macrococcus caseolyticus
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Macrococcus canis
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Macrococcus equipercicus
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Macrococcus carouselicus
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Macrococcus bovicus
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Macrococcus brunensis
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Salinicoccus jeotgali
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Salinicoccus salsiraiae
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Staphylococcus aureus subsp. aureus
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Staphylococcus aureus subsp. anaerobius
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Staphylococcus schweitzeri
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Staphylococcus argenteus
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Staphylococcus capitis subsp. capitis
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Staphylococcus capitis subsp. urealyticus
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Staphylococcus caprae
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Staphylococcus saccharolyticus
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Staphylococcus carnosus subsp. carnosus
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Staphylococcus carnosus subsp. utilis
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Staphylococcus piscifermentans
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Staphylococcus condimenti
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Staphylococcus cohnii subsp. cohnii
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Staphylococcus cohnii subsp. urealyticus
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Staphylococcus nepalensis
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Staphylococcus equorum subsp. equorum
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Staphylococcus equorum subsp. linens
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Staphylococcus hominis subsp. hominis
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Staphylococcus hominis subsp. novobiosepticus
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Staphylococcus hyicus
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Staphylococcus agnetis
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Staphylococcus intermedius
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Staphylococcus delphini
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Staphylococcus pseudintermedius
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Staphylococcus muscae
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Staphylococcus microti
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Staphylococcus rostri
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Staphylococcus petrasii subsp. petrasii
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Staphylococcus petrasii subsp. croceilyticus
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Staphylococcus petrasii subsp. jettensis
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Staphylococcus petrasii subsp. pragensis
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Staphylococcus saprophyticus subsp. saprophyticus
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Staphylococcus saprophyticus subsp. bovis
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Staphylococcus xylosus
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Staphylococcus schleiferi subsp. schleiferi
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Staphylococcus schleiferi subsp. coagulans
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Staphylococcus succinus subsp. succinus
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Staphylococcus succinus subsp. casei
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Baia soyae
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Croceifilum oryzae
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Laceyella sacchari
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Laceyella tengchongensis
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Laceyella sediminis
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Mechercharimyces mesophilus
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Mechercharimyces asporophorigenens
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Gemella haemolysans
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Gemella taiwanensis
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Gemella parahaemolysans
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Aerococcus viridans
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Aerococcus urinaeequi
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NBTM_s
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Granulicatella adiacens
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JVNU_s
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Alkalibacterium indicireducens
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Alkalibacterium thalassium
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Alkalibacterium pelagium
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Alkalibacterium putridalgicola
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Alkalibacterium subtropicum
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Carnobacterium alterfunditum
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Carnobacterium pleistocenium
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Carnobacterium divergens
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FLLU_s
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Carnobacterium funditum
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Carnobacterium iners
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Carnobacterium inhibens subsp. inhibens
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Carnobacterium inhibens subsp. gilichinskyi
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Carnobacterium viridans
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CP002563_s
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Marinilactibacillus psychrotolerans
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Marinilactibacillus piezotolerans
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Trichococcus flocculiformis
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Trichococcus pasteurii
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Trichococcus collinsii
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Trichococcus patagoniensis
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Trichococcus ilyis
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Trichococcus paludicola
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Trichococcus alkaliphilus
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Enterococcus canintestini
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Enterococcus saigonensis
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Enterococcus faecium
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Enterococcus durans
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Enterococcus hirae
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Enterococcus gallinarum
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Enterococcus casseliflavus
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NGKU_s
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LHOX_s
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KE350284_s
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Enterococcus malodoratus
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Enterococcus avium
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Enterococcus raffinosus
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Enterococcus gilvus
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Enterococcus moraviensis
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Enterococcus haemoperoxidus
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Enterococcus silesiacus
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Enterococcus caccae
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Enterococcus termitis
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Enterococcus ureasiticus
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Enterococcus rotai
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Enterococcus plantarum
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Enterococcus quebecensis
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Enterococcus ureilyticus
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Enterococcus crotali
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Enterococcus pseudoavium
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Enterococcus devriesei
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Enterococcus viikkiensis
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Enterococcus xiangfangensis
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Enterococcus saccharolyticus subsp. saccharolyticus
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Enterococcus saccharolyticus subsp. taiwanensis
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Enterococcus thailandicus
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Enterococcus sanguinicola
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Tetragenococcus halophilus subsp. halophilus
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Tetragenococcus halophilus subsp. flandriensis
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Lactobacillus amylovorus
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Lactobacillus kitasatonis
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Lactobacillus aviarius subsp. aviarius
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Lactobacillus aviarius subsp. araffinosus
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Lactobacillus casei
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Lactobacillus zeae
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Lactobacillus collinoides
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Lactobacillus paracollinoides
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Lactobacillus coryniformis subsp. coryniformis
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Lactobacillus coryniformis subsp. torquens
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Lactobacillus curvatus
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Lactobacillus graminis
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Lactobacillus delbrueckii subsp. delbrueckii
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Lactobacillus delbrueckii subsp. lactis
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Lactobacillus delbrueckii subsp. bulgaricus
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Lactobacillus delbrueckii subsp. indicus
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Lactobacillus delbrueckii subsp. sunkii
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Lactobacillus delbrueckii subsp. jakobsenii
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Lactobacillus farciminis
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Lactobacillus formosensis
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Lactobacillus fructivorans
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Lactobacillus homohiochii
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Lactobacillus gasseri
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Lactobacillus johnsonii
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Lactobacillus taiwanensis
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CP006809_s
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Lactobacillus helveticus
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Lactobacillus gallinarum
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Lactobacillus iwatensis
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Lactobacillus backii
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Lactobacillus jensenii
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Lactobacillus fornicalis
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Lactobacillus psittaci
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Lactobacillus kefiranofaciens subsp. kefiranofaciens
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Lactobacillus kefiranofaciens subsp. kefirgranum
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Lactobacillus koreensis
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Lactobacillus cerevisiae
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Lactobacillus kunkeei
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JXDC_s
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JXDA_s
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Lactobacillus mixtipabuli
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Lactobacillus silagincola
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Lactobacillus murinus
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Lactobacillus animalis
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Lactobacillus pantheris
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Lactobacillus thailandensis
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Lactobacillus paracasei subsp. paracasei
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Lactobacillus paracasei subsp. tolerans
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Lactobacillus paralimentarius
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Lactobacillus kimchii
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Lactobacillus plantarum subsp. plantarum
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Lactobacillus plantarum subsp. argentoratensis
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Lactobacillus pentosus
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Lactobacillus paraplantarum
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Lactobacillus sakei subsp. sakei
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Lactobacillus sakei subsp. carnosus
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Lactobacillus similis
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Lactobacillus odoratitofui
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Lactobacillus sunkii
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Lactobacillus otakiensis
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Lactobacillus uvarum
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Lactobacillus aquaticus
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Lactobacillus zymae
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Lactobacillus acidifarinae
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Pediococcus acidilactici
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Pediococcus parvulus
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Leuconostoc citreum
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Leuconostoc holzapfelii
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Leuconostoc gelidum subsp. gelidum
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Leuconostoc gelidum subsp. gasicomitatum
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Leuconostoc gelidum subsp. aenigmaticum
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Leuconostoc mesenteroides subsp. mesenteroides
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Leuconostoc mesenteroides subsp. dextranicum
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Leuconostoc mesenteroides subsp. cremoris
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Leuconostoc mesenteroides subsp. jonggajibkimchii
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Leuconostoc pseudomesenteroides
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Leuconostoc suionicum
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JDVA_s
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Weissella ghanensis
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Weissella fabaria
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Weissella hellenica
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Weissella bombi
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Weissella thailandensis
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Weissella jogaejeotgali
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Floricoccus tropicus
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Floricoccus penangensis
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Lactococcus garvieae subsp. garvieae
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Lactococcus garvieae subsp. bovis
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Lactococcus petauri
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AMQS_s
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AMFD_s
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Lactococcus lactis subsp. lactis
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Lactococcus lactis subsp. hordniae
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Lactococcus lactis subsp. cremoris
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Lactococcus lactis subsp. tructae
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Streptococcus anginosus subsp. anginosus
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Streptococcus anginosus subsp. whileyi
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JWEZ_s
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Streptococcus constellatus subsp. constellatus
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Streptococcus constellatus subsp. pharyngis
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Streptococcus constellatus subsp. viborgensis
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Streptococcus cristatus
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KQ969067_s
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JYGJ_s
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Streptococcus dysgalactiae subsp. dysgalactiae
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Streptococcus dysgalactiae subsp. equisimilis
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Streptococcus equi subsp. equi
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Streptococcus equi subsp. zooepidemicus
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Streptococcus equi subsp. ruminatorum
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Streptococcus equinus
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Streptococcus infantarius
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Streptococcus lutetiensis
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Streptococcus gallolyticus subsp. gallolyticus
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Streptococcus gallolyticus subsp. macedonicus
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Streptococcus gallolyticus subsp. pasteurianus
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Streptococcus gordonii
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KQ969111_s
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Streptococcus infantis
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AFUQ_s
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ALCH_s
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Streptococcus phocae subsp. phocae
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Streptococcus phocae subsp. salmonis
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Streptococcus pneumoniae
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Streptococcus oralis subsp. oralis
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Streptococcus oralis subsp. tigurinus
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Streptococcus oralis subsp. dentisani
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Streptococcus mitis
|
|
Streptococcus pseudopneumoniae
|
|
JYGM_s
|
|
KQ969525_s
|
|
JVSM_s
|
|
CP007628_s
|
|
NCUY_s
|
|
NCUR_s
|
|
NCUN_s
|
|
NCUI_s
|
|
MUYO_s
|
|
KQ969042_s
|
|
JYGO_s
|
|
JVFV_s
|
|
GL622184_s
|
|
CP019562_s
|
|
CP016207_s
|
|
CP014264_s
|
|
CKYA_s
|
|
AFUO_s
|
|
NCVM_s
|
|
NCVA_s
|
|
LVJM_s
|
|
LBMT_s
|
|
KV802702_s
|
|
KQ970296_s
|
|
KQ970267_s
|
|
KQ970240_s
|
|
JYGQ_s
|
|
JYGP_s
|
|
JVYO_s
|
|
JVWC_s
|
|
JPFY_s
|
|
JPFV_s
|
|
JPFU_s
|
|
JPFT_s
|
|
GL732500_s
|
|
FR720602_s
|
|
FN568063_s
|
|
CRPU_s
|
|
CP014326_s
|
|
CP012646_s
|
|
CKQD_s
|
|
ASZZ_s
|
|
AQTU_s
|
|
Streptococcus salivarius subsp. salivarius
|
|
Streptococcus thermophilus
|
|
Streptococcus vestibularis
|
|
ALIF_s
|
|
Streptococcus sanguinis
|
|
CDMW_s
|
|
GL890994_s
|
|
GL890987_s
|
|
Streptococcus timonensis
|
|
NCUW_s
|
|
KQ970764_s
|
|
JUQX_s
|
|
GL397180_s
|
|
FNJT_s
|
|
AP017652_s
|
|
JH378877_s
|
|
AJMM_s
|
|
JYGU_s
|
|
KB373321_s
|
|
LT671674_s
|
|
CZEF_s
|
