MTP Taxonomy
This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
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Aerococcus viridans 
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Aerococcus urinaeequi
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NBTM_s
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Granulicatella adiacens
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JVNU_s
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Alkalibacterium indicireducens
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Alkalibacterium thalassium
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Alkalibacterium pelagium
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Alkalibacterium putridalgicola
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Alkalibacterium subtropicum
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Carnobacterium alterfunditum
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Carnobacterium pleistocenium
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Carnobacterium divergens
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FLLU_s
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Carnobacterium funditum
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Carnobacterium iners
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Carnobacterium inhibens subsp. inhibens
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Carnobacterium inhibens subsp. gilichinskyi
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Carnobacterium viridans
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CP002563_s
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Marinilactibacillus psychrotolerans
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Marinilactibacillus piezotolerans
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Trichococcus flocculiformis
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Trichococcus pasteurii
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Trichococcus collinsii
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Trichococcus patagoniensis
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Trichococcus ilyis
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Trichococcus paludicola
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Trichococcus alkaliphilus
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Enterococcus canintestini
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Enterococcus saigonensis
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Enterococcus faecium
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Enterococcus durans
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Enterococcus hirae
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Enterococcus gallinarum
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Enterococcus casseliflavus
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NGKU_s
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LHOX_s
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KE350284_s
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Enterococcus malodoratus
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Enterococcus avium
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Enterococcus raffinosus
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Enterococcus gilvus
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Enterococcus moraviensis
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Enterococcus haemoperoxidus
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Enterococcus silesiacus
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Enterococcus caccae
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Enterococcus termitis
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Enterococcus ureasiticus
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Enterococcus rotai
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Enterococcus plantarum
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Enterococcus quebecensis
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Enterococcus ureilyticus
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Enterococcus crotali
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Enterococcus pseudoavium
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Enterococcus devriesei
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Enterococcus viikkiensis
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Enterococcus xiangfangensis
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Enterococcus saccharolyticus subsp. saccharolyticus
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Enterococcus saccharolyticus subsp. taiwanensis
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Enterococcus thailandicus
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Enterococcus sanguinicola
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Tetragenococcus halophilus subsp. halophilus
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Tetragenococcus halophilus subsp. flandriensis
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Lactobacillus amylovorus
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Lactobacillus kitasatonis
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Lactobacillus aviarius subsp. aviarius
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Lactobacillus aviarius subsp. araffinosus
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Lactobacillus casei
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Lactobacillus zeae
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Lactobacillus collinoides
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Lactobacillus paracollinoides
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Lactobacillus coryniformis subsp. coryniformis
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Lactobacillus coryniformis subsp. torquens
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Lactobacillus curvatus
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Lactobacillus graminis
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Lactobacillus delbrueckii subsp. delbrueckii
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Lactobacillus delbrueckii subsp. lactis
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Lactobacillus delbrueckii subsp. bulgaricus
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Lactobacillus delbrueckii subsp. indicus
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Lactobacillus delbrueckii subsp. sunkii
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Lactobacillus delbrueckii subsp. jakobsenii
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Lactobacillus farciminis
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Lactobacillus formosensis
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Lactobacillus fructivorans
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Lactobacillus homohiochii
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Lactobacillus gasseri
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Lactobacillus johnsonii
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Lactobacillus taiwanensis
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CP006809_s
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Lactobacillus helveticus
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Lactobacillus gallinarum
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Lactobacillus iwatensis
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Lactobacillus backii
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Lactobacillus jensenii
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Lactobacillus fornicalis
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Lactobacillus psittaci
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Lactobacillus kefiranofaciens subsp. kefiranofaciens
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Lactobacillus kefiranofaciens subsp. kefirgranum
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Lactobacillus koreensis
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Lactobacillus cerevisiae
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Lactobacillus kunkeei
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JXDC_s
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JXDA_s
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Lactobacillus mixtipabuli
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Lactobacillus silagincola
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Lactobacillus murinus
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Lactobacillus animalis
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Lactobacillus pantheris
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Lactobacillus thailandensis
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Lactobacillus paracasei subsp. paracasei
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Lactobacillus paracasei subsp. tolerans
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Lactobacillus paralimentarius
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Lactobacillus kimchii
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Lactobacillus plantarum subsp. plantarum
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Lactobacillus plantarum subsp. argentoratensis
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Lactobacillus pentosus
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Lactobacillus paraplantarum
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Lactobacillus sakei subsp. sakei
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Lactobacillus sakei subsp. carnosus
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Lactobacillus similis
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Lactobacillus odoratitofui
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Lactobacillus sunkii
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Lactobacillus otakiensis
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Lactobacillus uvarum
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Lactobacillus aquaticus
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Lactobacillus zymae
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Lactobacillus acidifarinae
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Pediococcus acidilactici
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Pediococcus parvulus
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Leuconostoc citreum
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Leuconostoc holzapfelii
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Leuconostoc gelidum subsp. gelidum
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Leuconostoc gelidum subsp. gasicomitatum
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Leuconostoc gelidum subsp. aenigmaticum
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Leuconostoc mesenteroides subsp. mesenteroides
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Leuconostoc mesenteroides subsp. dextranicum
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Leuconostoc mesenteroides subsp. cremoris
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Leuconostoc mesenteroides subsp. jonggajibkimchii
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Leuconostoc pseudomesenteroides
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Leuconostoc suionicum
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JDVA_s
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Weissella ghanensis
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Weissella fabaria
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Weissella hellenica
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Weissella bombi
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Weissella thailandensis
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Weissella jogaejeotgali
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Floricoccus tropicus
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Floricoccus penangensis
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Lactococcus garvieae subsp. garvieae
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Lactococcus garvieae subsp. bovis
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Lactococcus petauri
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AMQS_s
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AMFD_s
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Lactococcus lactis subsp. lactis
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Lactococcus lactis subsp. hordniae
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Lactococcus lactis subsp. cremoris
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Lactococcus lactis subsp. tructae
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Streptococcus anginosus subsp. anginosus
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Streptococcus anginosus subsp. whileyi
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JWEZ_s
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Streptococcus constellatus subsp. constellatus
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Streptococcus constellatus subsp. pharyngis
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Streptococcus constellatus subsp. viborgensis
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Streptococcus cristatus
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KQ969067_s
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JYGJ_s
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Streptococcus dysgalactiae subsp. dysgalactiae
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Streptococcus dysgalactiae subsp. equisimilis
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Streptococcus equi subsp. equi
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Streptococcus equi subsp. zooepidemicus
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Streptococcus equi subsp. ruminatorum
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Streptococcus equinus
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Streptococcus infantarius
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Streptococcus lutetiensis
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Streptococcus gallolyticus subsp. gallolyticus
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Streptococcus gallolyticus subsp. macedonicus
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Streptococcus gallolyticus subsp. pasteurianus
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Streptococcus gordonii
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KQ969111_s
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Streptococcus infantis
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AFUQ_s
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ALCH_s
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Streptococcus phocae subsp. phocae
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Streptococcus phocae subsp. salmonis
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Streptococcus pneumoniae
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Streptococcus oralis subsp. oralis
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Streptococcus oralis subsp. tigurinus
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Streptococcus oralis subsp. dentisani
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Streptococcus mitis
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Streptococcus pseudopneumoniae
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JYGM_s
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KQ969525_s
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JVSM_s
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CP007628_s
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NCUY_s
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NCUR_s
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NCUN_s
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NCUI_s
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MUYO_s
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KQ969042_s
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JYGO_s
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JVFV_s
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GL622184_s
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CP019562_s
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CP016207_s
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CP014264_s
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CKYA_s
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AFUO_s
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NCVM_s
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NCVA_s
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LVJM_s
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LBMT_s
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KV802702_s
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KQ970296_s
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KQ970267_s
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KQ970240_s
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JYGQ_s
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JYGP_s
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JVYO_s
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JVWC_s
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JPFY_s
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JPFV_s
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JPFU_s
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JPFT_s
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GL732500_s
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FR720602_s
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FN568063_s
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CRPU_s
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CP014326_s
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CP012646_s
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CKQD_s
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ASZZ_s
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AQTU_s
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Streptococcus salivarius subsp. salivarius
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Streptococcus thermophilus
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Streptococcus vestibularis
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ALIF_s
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Streptococcus sanguinis
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CDMW_s
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GL890994_s
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GL890987_s
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Streptococcus timonensis
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NCUW_s
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KQ970764_s
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JUQX_s
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GL397180_s
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FNJT_s
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AP017652_s
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JH378877_s
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AJMM_s
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JYGU_s
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KB373321_s
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LT671674_s
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CZEF_s
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