MTP Taxonomy
This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
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Aerococcus urinae 
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CP002512_s
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Aerococcus viridans
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Aerococcus urinaeequi
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NBTM_s
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Facklamia hominis
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AJ279038_s
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Globicatella sanguinis
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Globicatella sulfidifaciens
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HQ115584_s
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JN713272_s
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Granulicatella adiacens
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JVNU_s
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GQ869556_s
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FM873282_s
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Alkalibacterium olivapovliticus
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Alkalibacterium indicireducens
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Alkalibacterium kapii
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Alkalibacterium putridalgicola
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Alkalibacterium thalassium
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Alkalibacterium pelagium
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Alkalibacterium subtropicum
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Alkalibacterium gilvum
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Marinilactibacillus psychrotolerans
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Marinilactibacillus piezotolerans
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LSRN_s
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JANL_s
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FWDP_s
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FJ764780_s
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Atopostipes suicloacalis
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PAC001712_s
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PAC001675_s
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PAC001523_s
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Carnobacterium funditum
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Carnobacterium iners
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Carnobacterium inhibens subsp. inhibens
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Carnobacterium inhibens subsp. gilichinskyi
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Carnobacterium gallinarum
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Carnobacterium alterfunditum
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Carnobacterium viridans
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Carnobacterium maltaromaticum
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Carnobacterium pleistocenium
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Carnobacterium jeotgali
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CP002563_s
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Carnobacterium mobile
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CP010796_s
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Trichococcus flocculiformis
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Trichococcus palustris
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Trichococcus pasteurii
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Trichococcus collinsii
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Trichococcus patagoniensis
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Trichococcus ilyis
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Trichococcus paludicola
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Trichococcus alkaliphilus
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EU009749_s
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Catellicoccus marimammalium
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JF098940_s
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Enterococcus faecium
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Enterococcus saccharolyticus subsp. saccharolyticus
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Enterococcus saccharolyticus subsp. taiwanensis
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Enterococcus faecalis
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Enterococcus gallinarum
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Enterococcus durans
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Enterococcus casseliflavus
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Enterococcus malodoratus
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Enterococcus avium
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Enterococcus hirae
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Enterococcus mundtii
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Enterococcus raffinosus
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Enterococcus pseudoavium
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Enterococcus dispar
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Enterococcus moraviensis
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Enterococcus haemoperoxidus
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Enterococcus villorum
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Enterococcus ratti
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Enterococcus pallens
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Enterococcus gilvus
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Enterococcus canis
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Enterococcus phoeniculicola
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Enterococcus hermanniensis
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Enterococcus devriesei
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Enterococcus canintestini
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Enterococcus silesiacus
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Enterococcus caccae
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Enterococcus termitis
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Enterococcus thailandicus
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Enterococcus sanguinicola
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Enterococcus viikkiensis
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Enterococcus ureasiticus
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Enterococcus rotai
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Enterococcus rivorum
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Enterococcus lactis
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Enterococcus plantarum
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Enterococcus quebecensis
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Enterococcus ureilyticus
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Enterococcus lemanii
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Enterococcus eurekensis
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Enterococcus xiangfangensis
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Enterococcus olivae
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Enterococcus saigonensis
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Enterococcus crotali
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Enterococcus wangshanyuanii
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Isobaculum melis
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Vagococcus acidifermentans
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NGMM_s
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NGKU_s
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LHOX_s
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KE350284_s
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CVRN_s
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DQ345464_s
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AJ576366_s
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Enterococcus italicus
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Enterococcus camelliae
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Enterococcus sulfureus
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Enterococcus bulliens
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Carnobacterium divergens
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Lacticigenium naphtae
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Vagococcus fessus
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FLLU_s
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Tetragenococcus halophilus subsp. halophilus
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Tetragenococcus halophilus subsp. flandriensis
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Tetragenococcus koreensis
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Tetragenococcus solitarius
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Vagococcus humatus
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FNVY_s
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Vagococcus lutrae
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Vagococcus elongatus
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HE575979_s
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JF069447_s
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Vagococcus teuberi
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Vagococcus martis
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Lactobacillus acidipiscis
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Lactobacillus pobuzihii
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HM534773_s
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Lactobacillus amylophilus
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Lactobacillus amylotrophicus
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Lactobacillus aviarius subsp. aviarius
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Lactobacillus aviarius subsp. araffinosus
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Lactobacillus brevis
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Lactobacillus spicheri
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Lactobacillus hammesii
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Lactobacillus parabrevis
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Lactobacillus senmaizukei
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Lactobacillus paucivorans
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Lactobacillus koreensis
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Lactobacillus yonginensis
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Lactobacillus buchneri
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Lactobacillus hilgardii
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Lactobacillus parakefiri
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Lactobacillus diolivorans
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Lactobacillus parafarraginis
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Lactobacillus farraginis
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Lactobacillus rapi
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Lactobacillus kisonensis
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Lactobacillus capillatus
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Lactobacillus uvarum
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Lactobacillus sucicola
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Lactobacillus aquaticus
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Lactobacillus collinoides
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Lactobacillus paracollinoides
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Lactobacillus concavus
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Lactobacillus dextrinicus
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Lactobacillus coryniformis subsp. coryniformis
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Lactobacillus coryniformis subsp. torquens
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Lactobacillus crispatus
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Lactobacillus acidophilus
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Lactobacillus amylovorus
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Lactobacillus gallinarum
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Lactobacillus kitasatonis
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Lactobacillus ultunensis
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Lactobacillus delbrueckii subsp. delbrueckii
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Lactobacillus delbrueckii subsp. lactis
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Lactobacillus delbrueckii subsp. bulgaricus
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Lactobacillus delbrueckii subsp. indicus
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Lactobacillus delbrueckii subsp. sunkii
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Lactobacillus delbrueckii subsp. jakobsenii
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Lactobacillus equicursoris
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Lactobacillus farciminis
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Lactobacillus paralimentarius
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Lactobacillus kimchii
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Lactobacillus mindensis
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Lactobacillus nantensis
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Lactobacillus crustorum
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Lactobacillus bobalius
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Lactobacillus kimchiensis
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Lactobacillus heilongjiangensis
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Lactobacillus formosensis
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Lactobacillus musae
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Lactobacillus fermentum
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GQ156395_s
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Lactobacillus fructivorans
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Lactobacillus homohiochii
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Lactobacillus gasseri
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Lactobacillus johnsonii
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Lactobacillus taiwanensis
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Lactobacillus hominis
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CP006809_s
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Lactobacillus gastricus
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Lactobacillus equigenerosi
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Lactobacillus harbinensis
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Lactobacillus shenzhenensis
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Lactobacillus iwatensis
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Lactobacillus backii
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LGIZ_s
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Lactobacillus jensenii
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Lactobacillus fornicalis
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Lactobacillus psittaci
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Lactobacillus kefiranofaciens subsp. kefiranofaciens
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Lactobacillus kefiranofaciens subsp. kefirgranum
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Lactobacillus kefiri
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Lactobacillus parabuchneri
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Lactobacillus sunkii
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Lactobacillus otakiensis
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Lactobacillus kullabergensis
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Lactobacillus kimbladii
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Lactobacillus kunkeei
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Lactobacillus apinorum
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JXDC_s
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JXDA_s
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Lactobacillus mali
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Lactobacillus hordei
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Lactobacillus murinus
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Lactobacillus animalis
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Lactobacillus apodemi
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Lactobacillus faecis
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Lactobacillus nagelii
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Lactobacillus satsumensis
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Lactobacillus vini
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Lactobacillus sicerae
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Lactobacillus nodensis
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Lactobacillus allii
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Lactobacillus oligofermentans
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Lactobacillus nenjiangensis
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Lactobacillus pantheris
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Lactobacillus thailandensis
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Lactobacillus paracasei subsp. paracasei
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Lactobacillus paracasei subsp. tolerans
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Lactobacillus casei
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Lactobacillus rhamnosus
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Lactobacillus zeae
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Lactobacillus brantae
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Lactobacillus reuteri
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Lactobacillus oris
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Lactobacillus panis
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Lactobacillus frumenti
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Lactobacillus antri
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Lactobacillus caviae
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FTOY_s
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Lactobacillus plantarum subsp. plantarum
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Lactobacillus sakei subsp. carnosus
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Lactobacillus plantarum subsp. argentoratensis
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Lactobacillus sakei subsp. sakei
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Lactobacillus curvatus
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Lactobacillus pentosus
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Lactobacillus graminis
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Lactobacillus paraplantarum
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Lactobacillus fuchuensis
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Lactobacillus composti
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Lactobacillus fabifermentans
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Lactobacillus xiangfangensis
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Lactobacillus mudanjiangensis
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Lactobacillus herbarum
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Lactobacillus modestisalitolerans
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Lactobacillus salivarius
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AF197125_s
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JF920339_s
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Lactobacillus senioris
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Lactobacillus curieae
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Lactobacillus sharpeae
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Lactobacillus songhuajiangensis
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Lactobacillus similis
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Lactobacillus odoratitofui
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Lactobacillus kimchicus
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Lactobacillus silagei
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Lactobacillus mixtipabuli
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Lactobacillus silagincola
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Lactobacillus pentosiphilus
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Lactobacillus vaccinostercus
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Lactobacillus suebicus
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Lactobacillus manihotivorans
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Lactobacillus camelliae
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Lactobacillus hokkaidonensis
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Lactobacillus porcinae
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Lactobacillus wasatchensis
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JQ809688_s
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FN667299_s
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Lactobacillus versmoldensis
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Lactobacillus ginsenosidimutans
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Lactobacillus zymae
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Lactobacillus acidifarinae
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EU728746_s
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EU547306_s
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Pediococcus acidilactici
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Pediococcus pentosaceus
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Pediococcus parvulus
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Pediococcus claussenii
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Pediococcus stilesii
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Pediococcus cellicola
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Pediococcus ethanolidurans
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Fructobacillus ficulneus
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Fructobacillus tropaeoli
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Leuconostoc gelidum subsp. gelidum
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Leuconostoc gelidum subsp. gasicomitatum
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Leuconostoc gelidum subsp. aenigmaticum
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Leuconostoc inhae
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Leuconostoc miyukkimchii
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Leuconostoc kimchii
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Leuconostoc rapi
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Leuconostoc lactis
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Leuconostoc citreum
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Leuconostoc holzapfelii
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Leuconostoc palmae
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Leuconostoc mesenteroides subsp. mesenteroides
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Leuconostoc mesenteroides subsp. dextranicum
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Leuconostoc mesenteroides subsp. cremoris
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Leuconostoc mesenteroides subsp. jonggajibkimchii
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Leuconostoc suionicum
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Leuconostoc pseudomesenteroides
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JDVA_s
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Weissella confusa
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Weissella paramesenteroides
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Weissella hellenica
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Weissella soli
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Weissella cibaria
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Weissella oryzae
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Weissella bombi
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Weissella ghanensis
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Weissella fabaria
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Weissella beninensis
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Weissella fabalis
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Weissella minor
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Weissella uvarum
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Weissella thailandensis
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Weissella jogaejeotgali
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Floricoccus tropicus
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Floricoccus penangensis
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Lactococcus fujiensis
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Lactococcus hircilactis
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Lactococcus garvieae subsp. garvieae
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Lactococcus garvieae subsp. bovis
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Lactococcus formosensis
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Lactococcus petauri
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AMQS_s
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AMFD_s
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Lactococcus lactis subsp. lactis
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Lactococcus lactis subsp. hordniae
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Lactococcus lactis subsp. cremoris
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Lactococcus lactis subsp. tructae
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Lactococcus taiwanensis
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Lactococcus plantarum
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Lactococcus raffinolactis
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Lactococcus piscium
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Lactococcus chungangensis
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Lactococcus laudensis
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Lactococcus reticulitermitis
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Streptococcus acidominimus
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Streptococcus cuniculi
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Streptococcus azizii
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Streptococcus anginosus subsp. anginosus
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Streptococcus constellatus subsp. constellatus
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Streptococcus constellatus subsp. viborgensis
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Streptococcus anginosus subsp. whileyi
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Streptococcus constellatus subsp. pharyngis
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Streptococcus intermedius
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JWEZ_s
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Streptococcus criceti
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Streptococcus orisuis
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Streptococcus oriloxodontae
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Streptococcus dysgalactiae subsp. dysgalactiae
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Streptococcus dysgalactiae subsp. equisimilis
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Streptococcus equi subsp. equi
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Streptococcus equi subsp. zooepidemicus
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Streptococcus equi subsp. ruminatorum
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Streptococcus gallolyticus subsp. gallolyticus
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Streptococcus gallolyticus subsp. macedonicus
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Streptococcus gallolyticus subsp. pasteurianus
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Streptococcus equinus
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Streptococcus alactolyticus
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Streptococcus infantarius
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Streptococcus lutetiensis
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Streptococcus hyovaginalis
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Streptococcus pluranimalium
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Streptococcus loxodontisalivarius
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Streptococcus saliviloxodontae
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Streptococcus merionis
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Streptococcus rifensis
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Streptococcus moroccensis
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Streptococcus ruminantium
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AQQB_s
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Streptococcus mutans
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Streptococcus troglodytae
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Streptococcus ovis
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DQ318881_s
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Streptococcus pharyngis
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Streptococcus ovuberis
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Streptococcus phocae subsp. phocae
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Streptococcus phocae subsp. salmonis
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Streptococcus pneumoniae
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Streptococcus oralis subsp. oralis
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Streptococcus oralis subsp. tigurinus
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Streptococcus oralis subsp. dentisani
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Streptococcus mitis
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Streptococcus peroris
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Streptococcus infantis
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Streptococcus pseudopneumoniae
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Streptococcus lactarius
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Streptococcus timonensis
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NCUE_s
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NCUC_s
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LNVF_s
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JYGU_s
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JYGM_s
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ASXA_s
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AFUU_s
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AFUT_s
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AFUQ_s
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AFNM_s
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KQ970808_s
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KQ969525_s
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KQ969343_s
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KB373321_s
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JYGT_s
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JVSM_s
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CP007628_s
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ALCH_s
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NCUY_s
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NCUW_s
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NCUR_s
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NCUN_s
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NCUK_s
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NCUI_s
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MUYO_s
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KQ970764_s
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KQ969560_s
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KQ969042_s
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JYGO_s
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JVFV_s
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JUQX_s
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GL622184_s
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GL397180_s
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FNJT_s
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CP019562_s
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CP016207_s
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CP014264_s
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CKYA_s
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AP017652_s
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AFUO_s
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NCVM_s
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NCVA_s
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LVJM_s
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LBMT_s
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KV802702_s
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KQ970296_s
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KQ970267_s
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KQ970240_s
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KE150464_s
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JYGQ_s
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JYGP_s
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JVYO_s
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JVWC_s
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JPFY_s
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JPFV_s
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JPFU_s
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JPFT_s
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JH378877_s
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GL732500_s
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FR720602_s
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FN568063_s
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CRPU_s
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CP014326_s
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CP012646_s
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CKQD_s
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ASZZ_s
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AJMM_s
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AQTU_s
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Streptococcus pyogenes
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Streptococcus canis
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Streptococcus ictaluri
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Streptococcus ratti
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Streptococcus ursoris
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Streptococcus caviae
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Streptococcus salivarius subsp. salivarius
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Streptococcus thermophilus
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Streptococcus vestibularis
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GL698454_s
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ALIF_s
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Streptococcus sanguinis
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Streptococcus gordonii
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Streptococcus parasanguinis
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Streptococcus cristatus
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Streptococcus australis
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Streptococcus sinensis
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Streptococcus rubneri
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Streptococcus panodentis
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Streptococcus himalayensis
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KQ969111_s
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KB373315_s
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CP006776_s
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CP004409_s
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CDMW_s
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GL890994_s
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GL890987_s
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GL878553_s
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GL732452_s
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KQ969067_s
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JYGJ_s
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AFQU_s
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AFUC_s
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Streptococcus sobrinus
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Streptococcus downei
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Streptococcus dentirousetti
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Streptococcus suis
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Streptococcus parasuis
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LT671674_s
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CZEF_s
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DQ113766_s
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Streptococcus thoraltensis
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Streptococcus halotolerans
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Streptococcus uberis
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Streptococcus porcinus
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Streptococcus pseudoporcinus
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KQ969171_s
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HE681282_s
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EU458139_s
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