MTP Taxonomy
This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
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Arsenophonus arthropodicus 
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Arsenophonus nasoniae
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Blochmannia herculeanus
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Blochmannia pennsylvanicus
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Brenneria roseae subsp. americana
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Brenneria roseae subsp. roseae
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Buttiauxella agrestis
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Buttiauxella gaviniae
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Buttiauxella noackiae
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Citrobacter braakii
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Kluyvera intermedia
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Buttiauxella izardii
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Buttiauxella warmboldiae
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Cedecea davisae
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Cedecea neteri
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Citrobacter amalonaticus
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Citrobacter farmeri
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CP011602_s
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Citrobacter bitternis
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Citrobacter freundii
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Citrobacter pasteurii
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Kluyvera ascorbata
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Citrobacter murliniae
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Citrobacter werkmanii
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Citrobacter youngae
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Enterobacter aerogenes
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Raoultella terrigena
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Citrobacter rodentium
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Citrobacter sedlakii
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Cronobacter dublinensis subsp. dublinensis
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Cronobacter dublinensis subsp. lactaridi
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Cronobacter dublinensis subsp. lausannensis
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Dickeya aquatica
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Dickeya dieffenbachiae
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Dickeya zeae
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Dickeya dadantii subsp. dadantii
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Dickeya dadantii subsp. dieffenbachiae
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Dickeya dianthicola
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Edwardsiella anguillarum
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Edwardsiella ictaluri
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Edwardsiella piscicida
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Edwardsiella hoshinae
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Edwardsiella tarda
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CP003737_s
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Enterobacter cloacae subsp. cloacae
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Enterobacter cloacae subsp. dissolvens
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Enterobacter hormaechei
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Enterobacter kobei
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Enterobacter ludwigii
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Enterobacter mori
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JVQI_s
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JYMH_s
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Enterobacter asburiae
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Enterobacter bugandensis
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Enterobacter cancerogenus
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Enterobacter xiangfangensis
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Enterobacter oryziphilus
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Kosakonia arachidis
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Kosakonia oryzae
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Kosakonia radicincitans
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Erwinia billingiae
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Erwinia endophytica
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Erwinia mallotivora
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Erwinia psidii
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Erwinia toletana
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Pantoea ananatis
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Pantoea brenneri
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Pantoea conspicua
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Pantoea vagans
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AXOM_s
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Escherichia hermannii
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Escherichia coli
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Escherichia fergusonii
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Escherichia marmotae
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Shigella boydii
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Shigella dysenteriae
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Shigella flexneri
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Shigella sonnei
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Gibbsiella dentisursi
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Gibbsiella greigii
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Gibbsiella quercinecans
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Hafnia alvei
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Obesumbacterium proteus
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Klebsiella alba
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Klebsiella michiganensis
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Klebsiella oxytoca
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Klebsiella granulomatis
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Klebsiella pneumoniae subsp. ozaenae
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Klebsiella pneumoniae subsp. pneumoniae
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Klebsiella pneumoniae subsp. rhinoscleromatis
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Klebsiella quasipneumoniae subsp. quasipneumoniae
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Klebsiella quasipneumoniae subsp. similipneumoniae
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Klebsiella variicola
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CP005991_s
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Kosakonia sacchari
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Lelliottia amnigena
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Lelliottia nimipressuralis
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Lonsdalea quercina subsp. britannica
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Lonsdalea quercina subsp. iberica
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Lonsdalea quercina subsp. populi
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Lonsdalea quercina subsp. quercina
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Morganella morganii subsp. morganii
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Morganella morganii subsp. sibonii
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AKIT_s
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JTJJ_s
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AP012551_s
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Pantoea anthophila
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Pantoea deleyi
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Pantoea dispersa
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Pantoea eucrina
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Pantoea wallisii
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CCAQ_s
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Pantoea rodasii
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Pantoea rwandensis
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Pantoea septica
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Curtobacterium plantarum
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Pantoea agglomerans
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Pantoea eucalypti
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Pantoea calida
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Pantoea gaviniae
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Pantoea stewartii subsp. indologenes
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Pantoea stewartii subsp. stewartii
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Pectobacterium aroidearum
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Pectobacterium carotovorum subsp. carotovorum
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Pectobacterium carotovorum subsp. odoriferum
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Pectobacterium atrosepticum
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Pectobacterium wasabiae
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Photorhabdus asymbiotica subsp. asymbiotica
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Photorhabdus asymbiotica subsp. australis
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Photorhabdus luminescens subsp. akhurstii
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Photorhabdus luminescens subsp. caribbeanensis
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Photorhabdus luminescens subsp. hainanensis
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Photorhabdus luminescens subsp. kayaii
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Photorhabdus luminescens subsp. kleinii
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Photorhabdus luminescens subsp. laumondii
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Photorhabdus luminescens subsp. luminescens
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Photorhabdus luminescens subsp. noenieputensis
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Photorhabdus temperata subsp. cinerea
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Photorhabdus temperata subsp. khanii
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Photorhabdus temperata subsp. stackebrandtii
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Photorhabdus temperata subsp. tasmaniensis
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Photorhabdus temperata subsp. temperata
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Photorhabdus temperata subsp. thracensis
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Proteus hauseri
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Proteus terrae
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Proteus penneri
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Proteus vulgaris
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AZYZ_s
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Providencia alcalifaciens
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Providencia rustigianii
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Providencia burhodogranariea
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Providencia sneebia
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Providencia rettgeri
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Providencia vermicola
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Providencia stuartii
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Providencia thailandensis
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Pseudocitrobacter anthropi
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Pseudocitrobacter faecalis
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CP002505_s
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Rahnella aquatilis
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Rahnella bruchi
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Rahnella variigena
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Rahnella victoriana
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Rahnella woolbedingensis
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Raoultella ornithinolytica
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Raoultella planticola
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Salmonella enterica subsp. arizonae
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Salmonella enterica subsp. diarizonae
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Salmonella enterica subsp. enterica
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Salmonella enterica subsp. houtenae
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Salmonella enterica subsp. indica
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Salmonella enterica subsp. salamae
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KQ089779_s
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Serratia marcescens subsp. marcescens
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Serratia marcescens subsp. sakuensis
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Serratia nematodiphila
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Serratia ficaria
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Serratia vespertilionis
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Serratia fonticola
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Serratia glossinae
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Serratia grimesii
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Serratia liquefaciens
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Serratia proteamaculans
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Serratia myotis
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Serratia plymuthica
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Serratia quinivorans
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Sodalis melophagi
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Sodalis praecaptivus
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Tatumella morbirosei
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Tatumella punctata
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Tatumella ptyseos
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Tatumella terrea
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Trabulsiella guamensis
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Trabulsiella odontotermitis
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CP009997_s
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CQER_s
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Yersinia aldovae
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Yersinia aleksiciae
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Yersinia bercovieri
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Yersinia intermedia
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Yersinia mollaretii
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Yersinia pekkanenii
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CQAW_s
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Yersinia enterocolitica subsp. enterocolitica
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Yersinia enterocolitica subsp. palearctica
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Yersinia rohdei
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CQBO_s
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Yersinia frederiksenii
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Yersinia pseudotuberculosis
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Yersinia similis
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Yersinia wautersii
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CQBW_s
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Yersinia entomophaga
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Yersinia nurmii
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