Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales
Acetobacteraceae (ex Henrici 1939) Gillis and De Ley 1980
Acetobacter Beijerinck 1898
Acetobacter aceti (Pasteur 1864) Beijerinck 1898
Acetobacter ascendens (De Ley and Frateur 1974) Hördt et al. 2020
Acetobacter cerevisiae Cleenwerck et al. 2002
Acetobacter cibinongensis Lisdiyanti et al. 2002
Acetobacter conturbans Sombolestani et al. 2020
Acetobacter estunensis (Carr 1958) Lisdiyanti et al. 2001
Acetobacter fabarum Cleenwerck et al. 2008
Acetobacter fallax Sombolestani et al. 2020
Acetobacter farinalis Tanasupawat et al. 2011
Acetobacter garciniae Yukphan et al. 2021
Acetobacter ghanensis Cleenwerck et al. 2007
Acetobacter indonesiensis Lisdiyanti et al. 2001
Acetobacter lambici Spitaels et al. 2014
Acetobacter lovaniensis (Frateur 1950) Lisdiyanti et al. 2001
Acetobacter malorum Cleenwerck et al. 2002
Acetobacter musti Ferrer et al. 2016
Acetobacter nitrogenifigens Dutta and Gachhui 2006
Acetobacter oeni Silva et al. 2006
Acetobacter okinawensis Iino et al. 2013
Acetobacter orientalis Lisdiyanti et al. 2002
Acetobacter orleanensis (Henneberg 1906) Lisdiyanti et al. 2001
Acetobacter oryzifermentans Kim et al. 2019
Acetobacter oryzoeni Baek et al. 2020
Acetobacter papayae Iino et al. 2013
Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916
Acetobacter peroxydans Visser't Hooft 1925
Acetobacter persici Iino et al. 2013
Acetobacter pomorum Sokollek et al. 1998
Acetobacter sacchari Vu et al. 2020
Acetobacter senegalensis Ndoye et al. 2007
Acetobacter sicerae Li et al. 2014
Acetobacter suratthaniensis Pitiwittayakul et al. 2016
Acetobacter syzygii Lisdiyanti et al. 2002
Acetobacter thailandicus Pitiwittayakul et al. 2016
Acetobacter tropicalis Lisdiyanti et al. 2001
Acetobacter vaccinii Heo et al. 2022
CP014692_s
Acidibrevibacterium Muhadesi et al. 2019
Acidibrevibacterium fodinaquatile Muhadesi et al. 2019
Acidicaldus Johnson et al. 2006
Acidicaldus organivorans Johnson et al. 2006
AM749760_s
DQ834211_s
Acidiphilium Harrison 1981
Acidiphilium acidophilum (Harrison 1983) Hiraishi et al. 1998
Acidiphilium cryptum Harrison 1981
Acidiphilium iwatense Okamura et al. 2015
Acidiphilium multivorum Wakao et al. 1995
Acidiphilium organovorum Lobos et al. 1986
Acidiphilium rubrum Wichlacz et al. 1986
AF376026_s
DQ464156_s
DQ906056_s
HF558532_s
Acidisoma Belova et al. 2009
Acidisoma cellulosilyticum Mieszkin et al. 2022
Acidisoma sibiricum Belova et al. 2009
Acidisoma silvae Mieszkin et al. 2022
Acidisoma tundrae Belova et al. 2009
AM697382_s
Acidisphaera Hiraishi et al. 2000
Acidisphaera rubrifaciens Hiraishi et al. 2000
AF465654_s
AJ292609_s
AJ867914_s
AY395444_s
DQ378204_s
EF446227_s
EF520414_s
EU861889_s
PAC000374_s
PAC000719_s
PAC001028_s
PAC001171_s
PAC001715_s
PAC002532_s
PAC003155_s
PAC003156_s
Acidocella Kishimoto et al. 1996
Acidocella aluminiidurans Kimoto et al. 2010
Acidocella aminolytica (Kishimoto et al. 1994) Kishimoto et al. 1996
Acidocella aquatica Okamoto et al. 2017
Acidocella aromatica Jones et al. 2021
Acidocella facilis (Wichlacz et al. 1986) Kishimoto et al. 1996
EU360474_s
EU360483_s
JF737895_s
PAC000014_s
Acidomonas Urakami et al. 1989
Acidomonas methanolica (Uhlig et al. 1986) Urakami et al. 1989
AF407720_g
AF407720_s
Ameyamaea Yukphan et al. 2010
Ameyamaea chiangmaiensis Yukphan et al. 2010
Aristophania Guzman et al. 2023
Aristophania vespae Guzman et al. 2023
Asaia Yamada et al. 2000
Asaia astilbis Suzuki et al. 2012
Asaia bogorensis Yamada et al. 2000
Asaia krungthepensis Yukphan et al. 2004
Asaia lannensis Malimas et al. 2008
Asaia platycodi Suzuki et al. 2012
Asaia prunellae Suzuki et al. 2012
Asaia siamensis Katsura et al. 2001
Asaia spathodeae Kommanee et al. 2010
FJ774959_s
AY345392_g
AY345392_s
Belnapia Reddy et al. 2006
Belnapia arida Molina-Menor et al. 2021
Belnapia moabensis Reddy et al. 2006
Belnapia mucosa Molina-Menor et al. 2021
Belnapia rosea Jin et al. 2012
Belnapia soli Jin et al. 2013
Bombella Li et al. 2015
AJ971849_s
Bombella apis Yun et al. 2017
Bombella dulcis Härer et al. 2023
Bombella favorum Hilgarth et al. 2021
Bombella intestini Li et al. 2015
Bombella mellum Hilgarth et al. 2021
Bombella pluederhausensis Härer et al. 2023
Bombella pollinis Härer et al. 2023
Bombella saccharophila Härer et al. 2023
HM108459_s
Caldovatus Habib et al. 2017
Caldovatus aquaticus Hu et al. 2022
Caldovatus sediminis Habib et al. 2017
Commensalibacter Roh et al. 2019
ATSX_s
AY370188_s
Commensalibacter intestini Roh et al. 2019
HM112282_s
JQ726788_s
JQ914113_s
Craurococcus Saitoh et al. 1998
Craurococcus roseus Saitoh et al. 1998
DQ123620_s
DQ129249_s
DQ129304_s
DQ130024_s
DQ532166_s
DQ815048_s
DQ990962_s
EF682998_s
HM362532_s
HM366511_s
HQ910258_s
JF046640_s
JF089694_s
JF178037_s
JX133597_s
JX133610_s
Crenalkalicoccus Ming et al. 2016
Crenalkalicoccus roseus Ming et al. 2016
Dankookia Kim et al. 2016
Dankookia rubra Kim et al. 2016
DQ129635_g
DQ129635_s
JN178030_s
DQ532333_g
DQ532333_s
FJ595614_s
JF168159_s
JF227128_s
DQ660883_g
AM697216_s
DQ660883_s
DQ906052_g
DQ906052_s
EF520429_g
AJ290043_s
EF520429_s
Endobacter Ramírez-Bahena et al. 2013
Endobacter medicaginis Ramírez-Bahena 2013
Entomobacter Guzman et al. 2021
Entomobacter blattae Guzman et al. 2021
EU861908_g
EU861908_s
Falsiroseomonas Rai et al. 2022
AM691109_s
DQ532254_s
Falsiroseomonas algicola (Kim et al. 2020) Rai et al. 2022
Falsiroseomonas arcticisoli (Kim et al. 2016) Rai et al. 2022
Falsiroseomonas bella (Zhang et al. 2020) Rai et al. 2022
Falsiroseomonas frigidaquae (Kim et al. 2009) Rai et al. 2022
Falsiroseomonas riguiloci (Baik et al. 2012) Rai et al. 2022
Falsiroseomonas selenitidurans (Hou et al. 2020) Rai et al. 2022
Falsiroseomonas stagni (Furuhata et al. 2008) Rai et al. 2022
Falsiroseomonas terricola (Kim et al. 2017) Rai et al. 2022
Falsiroseomonas tokyonensis (Furuhata et al. 2014) Rai et al. 2022
Falsiroseomonas wooponensis (Lee et al. 2015) Rai et al. 2022
FJ936809_s
JN030432_s
Roseomonas oleicola Wu et al. 2021
Roseomonas ponticola Yin et al. 2021
Formicincola Chua et al. 2022
Formicincola oecophyllae Chua et al. 2022
Gluconacetobacter Yamada et al. 1998
Gluconacetobacter aggeris Nishijima et al. 2013
Gluconacetobacter asukensis Tazato et al. 2012
Gluconacetobacter azotocaptans Fuentes-Ramírez et al. 2001
Gluconacetobacter diazotrophicus (Gillis et al. 1989) Yamada et al. 1998
Gluconacetobacter dulcium Sombolestani et al. 2021
Gluconacetobacter johannae Fuentes-Ramírez et al. 2001
Gluconacetobacter liquefaciens (Asai 1935) Yamada et al. 1998
Gluconacetobacter sacchari Franke et al. 1999
Gluconacetobacter takamatsuzukensis Nishijima et al. 2013
Gluconacetobacter tumulicola Tazato et al. 2012
Gluconacetobacter tumulisoli Nishijima et al. 2013
Nguyenibacter vanlangensis Thi Lan Vu et al. 2013
Gluconobacter Asai 1935
Gluconobacter aidae Yukphan et al. 2020
Gluconobacter albidus (ex Kondo and Ameyama 1958) Yukphan et al. 2005
Gluconobacter cadivus Sombolestani et al. 2021
Gluconobacter cerevisiae Spitaels et al. 2014
Gluconobacter cerinus (ex Asai 1935) Yamada and Akita 1984
Gluconobacter frateurii Mason and Claus 1989
Gluconobacter japonicus Malimas et al. 2009
Gluconobacter kanchanaburiensis Malimas et al. 2009
Gluconobacter kondonii Malimas et al. 2008
Gluconobacter morbifer Roh et al. 2019
Gluconobacter oxydans (Henneberg 1897) De Ley 1961
Gluconobacter potus Sombolestani et al. 2021
Gluconobacter roseus (ex Asai 1935) Malimas et al. 2008
Gluconobacter sphaericus (Ameyama 1975) Malimas et al. 2008
Gluconobacter thailandicus Tanasupawat et al. 2005
Gluconobacter vitians Sombolestani et al. 2021
Gluconobacter wancherniae Yukphan et al. 2010
GQ397096_g
GQ397096_s
Granulibacter Greenberg et al. 2006
CP018191_s
Granulibacter bethesdensis Greenberg et al. 2006
Humitalea Margesin and Zhang 2013
Humitalea rosea Margesin and Zhang 2013
JF171456_g
JF126127_s
JF171456_s
Komagataeibacter Yamada et al. 2013
CP041348_s
Komagataeibacter diospyri Naloka et al. 2020
Komagataeibacter europaeus (Sievers et al. 1992) Yamada et al. 2013
Komagataeibacter intermedius (Boesch et al. 1998) Yamada et al. 2013
Komagataeibacter kakiaceti (Iino et al. 2012) Yamada 2014
Komagataeibacter medellinensis (Castro et al. 2013) Yamada 2014
Komagataeibacter melaceti Marič et al. 2020
Komagataeibacter melomenusus Marič et al. 2020
Komagataeibacter nataicola (Lisdiyanti et al. 2006) Yamada et al. 2013
Komagataeibacter oboediens (Sokollek et al. 1998) Yamada et al. 2013
Komagataeibacter rhaeticus (Dellaglio et al. 2005) Yamada et al. 2013
Komagataeibacter saccharivorans (Lisdiyanti et al. 2006) Yamada et al. 2013
Komagataeibacter sucrofermentans (Toyosaki et al. 1996) Yamada et al. 2013
Komagataeibacter swingsii (Dellaglio et al. 2005) Yamada et al. 2013
Komagataeibacter xylinus (Brown 1886) Yamada et al. 2013
QQBI_s
Kozakia Lisdiyanti et al. 2002
Kozakia baliensis Lisdiyanti et al. 2002
Lichenicoccus Pankratov et al. 2020
AJ292611_s
Lichenicoccus roseus Pankratov et al. 2020
Lichenicola Noh et al. 2020
AM697168_s
Lichenicola cladoniae Noh et al. 2020
Neoasaia Yukphan et al. 2006
Neoasaia chiangmaiensis Yukphan et al. 2006
Neokomagataea Yukphan et al. 2011
Neokomagataea anthophila Charoenyingcharoen et al. 2022
Neokomagataea tanensis Yukphan et al. 2011
Neokomagataea thailandica Yukphan et al. 2011
Neoroseomonas Rai et al. 2022
AM991117_s
EU803336_s
Neoroseomonas alkaliterrae (Dong et al. 2014) Rai et al. 2022
Neoroseomonas eburnea (Wang et al. 2016) Rai et al. 2022
Neoroseomonas lacus (Jiang et al. 2006) Rai et al. 2022
Neoroseomonas marina Rai et al. 2023
Neoroseomonas oryzicola (Chung et al. 2015) Rai et al. 2022
Neoroseomonas sediminicola (He et al. 2019) Rai et al. 2022
Neoroseomonas soli (Kim and Ka 2014) Rai et al. 2022
Neoroseomonas terrae (Yoon et al. 2007) Rai et al. 2022
Roseomonas rubea Lee and Whang 2022
STGD_s
Novacetimonas Brandão et al. 2022
Gluconacetobacter entanii Schüller et al. 2000
Novacetimonas cocois (Liu et al. 2018) Brandão et al. 2022
Novacetimonas hansenii (Gosselé et al. 1983) Brandão et al. 2022
Novacetimonas maltaceti (Slapšak et al. 2013) Brandão et al. 2022
Novacetimonas pomaceti (Škraban et al. 2019) Brandão et al. 2022
Oecophyllibacter Chua et al. 2021
Oecophyllibacter saccharovorans Chua et al. 2021
PAC000081_g
DQ129264_s
DQ833767_s
HQ674811_s
HQ674812_s
JF028484_s
JX098353_s
PAC000081_s
PAC000258_g
AJ292598_s
AY326614_s
DQ378201_s
EF516502_s
EF516726_s
FJ466138_s
FJ466203_s
FJ466371_s
FJ625329_s
GQ402609_s
GQ402749_s
GU127727_s
PAC000258_s
PAC000259_s
PAC000373_s
PAC000717_s
Y07583_s
Y07647_s
PAC000327_g
AM697144_s
FM874383_s
PAC000327_s
PAC000434_s
PAC000328_g
AJ292602_s
AM696989_s
AM697086_s
AY192273_s
DQ378212_s
EF516293_s
EU861903_s
EU861940_s
FJ466024_s
FJ466044_s
FJ595556_s
FM872588_s
FM874498_s
GQ495410_s
HQ327266_s
HQ595211_s
HQ622721_s
HQ622739_s
HQ622748_s
JF177852_s
JF182044_s
PAC000328_s
PAC000329_s
PAC000721_s
PAC000465_g
AM162450_s
AY913276_s
FJ625359_s
HE587193_s
HM124396_s
PAC000465_s
PAC002567_s
PAC002612_s
PAC002533_g
AY326615_s
FJ466439_s
PAC002533_s
Paeniroseomonas Rai et al. 2022
AF170742_s
Paeniroseomonas aquatica (Gallego et al. 2006) Rai et al. 2022
Paeniroseomonas fluminis (Ko et al. 2018) Rai et al. 2022
Paracraurococcus Saitoh et al. 1998
Paracraurococcus ruber Saitoh et al. 1998
Pararoseomonas Rai et al. 2022
EU540200_s
FM211708_s
JF145460_s
JF176611_s
Pararoseomonas aeriglobus (Lee and Jeon 2018) Rai et al. 2022
Pararoseomonas aerilata (Yoo et al. 2008) Rai et al. 2022
Pararoseomonas harenae (Deng et al. 2020) Rai et al. 2022
Pararoseomonas nepalensis (Chaudhary and Kim 2017) Rai et al. 2022
Pararoseomonas pecuniae (Lopes et al. 2011) Rai et al. 2022
Pararoseomonas radiodurans (Kim et al. 2018) Rai et al. 2022
Pararoseomonas rosea (Kämpfer et al. 2003) Rai et al. 2022
Pararoseomonas vinacea (Zhang et al. 2008) Rai et al. 2022
Roseomonas aceris Tonouchi and Tazawa 2014
Roseomonas chloroacetimidivorans Chu et al. 2016
Plastoroseomonas Rai et al. 2022
GQ396883_s
Plastoroseomonas arctica (Qiu et al. 2016) Rai et al. 2022
Plastoroseomonas hellenica (Rat et al. 2021) Rai et al. 2022
Pseudoroseomonas Rai et al. 2022
AJ315073_s
HQ323460_s
JH599943_s
Pseudoroseomonas aerofrigidensis (Hyeon and Jeon 2017) Rai et al. 2022
Pseudoroseomonas aerophila (Kim et al. 2013) Rai et al. 2022
Pseudoroseomonas aestuarii (Venkata Ramana et al. 2010) Rai et al. 2022
Pseudoroseomonas cervicalis (Rihs et al. 1998) Rai et al. 2022
Pseudoroseomonas coralli (Li et al. 2021) Rai et al. 2022
Pseudoroseomonas deserti (Subhash and Lee 2018) Rai et al. 2022
Pseudoroseomonas globiformis (Fang et al. 2018) Rai et al. 2022
Pseudoroseomonas hibiscisoli (Yan et al. 2017) Rai et al. 2022
Pseudoroseomonas ludipueritiae (Kämpfer et al. 2003) Rai et al. 2022
Pseudoroseomonas musae (Nutaratat et al. 2017) Rai et al. 2022
Pseudoroseomonas oryzae (Ramaprasad et al. 2015) Rai et al. 2022
Pseudoroseomonas rhizosphaerae (Chen et al. 2014) Rai et al. 2022
Pseudoroseomonas rubra (Subhash et al. 2016) Rai et al. 2022
Pseudoroseomonas suffusca (Subhash and Lee 2017) Rai et al. 2022
Pseudoroseomonas vastitatis (Zhao et al. 2020) Rai et al. 2022
Pseudoroseomonas wenyumeiae (Tian et al. 2019) Rai et al. 2022
Roseomonas haemaphysalidis Zhu et al. 2021
Roseomonas marmotae Zhu et al. 2021
Rhodopila Imhoff et al. 1984
AJ867748_s
AM162403_s
AY234551_s
EU360476_s
EU861954_s
FJ465991_s
FQ659590_s
FQ659602_s
LMUJ_s
PAC000021_s
PAC000106_s
PAC000433_s
PAC000716_s
Rhodopila globiformis (Pfennig 1974) Imhoff et al. 1984
Rhodovarius Kämpfer et al. 2004
EF520396_s
Rhodovarius crocodyli Chen et al. 2020
Rhodovarius lipocyclicus Kämpfer et al. 2004
Rhodovastum Okamura et al. 2018
PAC000432_s
Rhodovastum atsumiense Okamura et al. 2018
Roseicella Khan et al. 2019
DQ129633_s
FM873623_s
Roseicella aerolata Qin et al. 2022
Roseicella aquatilis Zhang et al. 2022
Roseicella frigidaeris Khan et al. 2019
Roseococcus Yurkov et al. 1994
Roseococcus microcysteis Kim et al. 2021
Roseococcus pinisoli Shen et al. 2022
Roseococcus suduntuyensis Boldareva et al. 2009
Roseococcus thiosulfatophilus Yurkov et al. 1994
Roseomonas Rihs et al. 1998
DQ532240_s
HM366485_s
JF019591_s
Roseomonas acroporae Xie et al. 2023
Roseomonas elaeocarpi Damtab et al. 2016
Roseomonas fluvialis Hirose et al. 2023
Roseomonas gilardii Rihs et al. 1998
Roseomonas mucosa Han et al. 2003
Roseomonas rosulenta Lee and Whang 2022
Rubritepida Alarico et al. 2002
Rubritepida flocculans Alarico et al. 2002
Sabulicella Lin et al. 2021
AM930362_s
Sabulicella rubraurantiaca Lin et al. 2021
Saccharibacter Jojima et al. 2004
Saccharibacter floricola Jojima et al. 2004
WVHP_s
Sediminicoccus Qu et al. 2014
AF173825_s
Sediminicoccus rosea Qu et al. 2014
SJXD_s
Siccirubricoccus Yang et al. 2017
Siccirubricoccus deserti Yang et al. 2017
Siccirubricoccus phaeus Li et al. 2022
Siccirubricoccus soli Zhu et al. 2022
Swaminathania Loganathan and Nair 2004
Swaminathania salitolerans Loganathan and Nair 2004
Swingsia Malimas et al. 2014
Swingsia samuiensis Malimas et al. 2014
Tanticharoenia Yukphan et al. 2008
Tanticharoenia aidae Vu et al. 2016
Tanticharoenia sakaeratensis Yukphan et al. 2008
Data type count
  • 0
    Genome
  • 0
    16S rRNA