Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Firmicutes;Clostridia;Clostridiales
Clostridiaceae Pribram 1933
AB218342_g
AB218342_s
FN667331_s
HM992491_s
HQ904253_s
Arthromitus Snel et al. 1995
AP012202_s
AP012210_s
AY007720_s
DQ113757_s
LXFF_s
X80834_s
Caloramator Collins et al. 1994
Caloramator australicus Ogg and Patel 2009
Caloramator boliviensis Crespo et al. 2012
Caloramator coolhaasii Plugge et al. 2000
Caloramator fervidus (Patel et al. 1987) Collins et al. 1994
Caloramator indicus Chrisostomos et al. 1996
Caloramator mitchellensis Ogg and Patel 2011
Caloramator proteoclasticus Tarlera et al. 1997
Caloramator quimbayensis Rubiano-Labrador et al. 2013
Caloramator viterbiensis Seyfried et al. 2002
Clostridium cylindrosporum (ex Barker and Beck 1942) Andreesen et al. 1985
Thermobrachium celere Engle et al. 1996
Clostridium Prazmowski 1880
AB081585_s
AB186863_s
AB218295_s
AB218323_s
AB239189_s
AB294746_s
AB447733_s
AB479046_s
AB486118_s
AB486197_s
AB486259_s
AB486267_s
AB486804_s
AB486908_s
AB487095_s
AF407686_s
AJ009473_s
AJ229185_s
ALXI_s
AVSV_s
AY337519_s
AY551086_s
AY685918_s
AY949856_s
CACRTO_s
Clostridium acetireducens Örlygsson et al. 1996
Clostridium acetobutylicum McCoy et al. 1926
Clostridium acidisoli Kuhner et al. 2000
Clostridium aciditolerans Lee et al. 2007
Clostridium aestuarii Kim et al. 2007
Clostridium akagii Kuhner et al. 2000
Clostridium algidicarnis Lawson et al. 1995
Clostridium algifaecis Wu et al. 2014
Clostridium algoriphilum Shcherbakova et al. 2010
Clostridium amazonense O'Neal et al. 2015
Clostridium amylolyticum Song and Dong 2008
Clostridium arbusti Jung et al. 2010
Clostridium argentinense Suen et al. 1988
Clostridium aromativorans Luo et al. 2023
Clostridium baratii (Prévot 1938) Holdeman and Moore 1970
Clostridium beihaiense Dong et al. 2018
Clostridium beijerinckii Donker 1926
Clostridium bornimense Hahnke et al. 2014
Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923
Clostridium botulinum_E
Clostridium bovifaecis Zhu et al. 2018
Clostridium bowmanii Spring et al. 2003
Clostridium budayi (Le Blaye and Guggenheim 1914) Bernard et al. 2018
Clostridium butyricum Prazmowski 1880
Clostridium cadaveris (Klein 1899) McClung and McCoy 1957
Clostridium cagae Tall et al. 2020
Clostridium caldaquaticum Lv et al. 2023
Clostridium carboxidivorans Liou et al. 2005
Clostridium carnis (Klein 1904) Spray 1939
Clostridium cavendishii Bowman et al. 2010
Clostridium celatum Hauschild and Holdeman 1974
Clostridium cellulovorans Sleat et al. 1985
Clostridium chartatabidum Kelly et al. 1996
Clostridium chauvoei (Arloing et al. 1887) Scott 1928
Clostridium chromiireducens Inglett et al. 2011
Clostridium chrysemydis Hunter et al. 2021
Clostridium cibarium Gilroy et al. 2021
Clostridium cochlearium (Douglas et al. 1919) Bergey et al. 1923
Clostridium colicanis Greetham et al. 2003
Clostridium collagenovorans Jain and Zeikus 1988
Clostridium combesii (Prévot and Laplanche 1947) Bernard et al. 2018
Clostridium composti Shin et al. 2018
Clostridium culturomicium Kieu et al. 2021
Clostridium disporicum Horn 1987
Clostridium drakei Liou et al. 2005
Clostridium estertheticum Collins et al. 1993
Clostridium faecium Gilroy et al. 2021
Clostridium fallax (Weinberg and Seguin 1915) Bergey et al. 1923
Clostridium fermenticellae Xu et al. 2019
Clostridium folliculivorans Tazawa et al. 2023
Clostridium frigidicarnis Broda et al. 1999
Clostridium frigoris Spring et al. 2003
Clostridium fungisolvens Ueki et al. 2021
Clostridium gallinarum Gilroy et al. 2021
Clostridium ganghwense Kim et al. 2006
Clostridium gasigenes Broda et al. 2000
Clostridium gelidum Honma et al. 2022
Clostridium grantii Mountfort et al. 1996
Clostridium guangxiense Zhao et al. 2017
Clostridium haemolyticum (Hall 1929) Scott et al. 1935
Clostridium hominis Liu et al. 2022
Clostridium homopropionicum Dörner and Schink 1991
Clostridium huakuii Ruan et al. 2014
Clostridium hydrogeniformans Bowman et al. 2010
Clostridium intestinale Lee et al. 1989
Clostridium isatidis Padden et al. 1999
Clostridium kluyveri Barker and Taha 1942
Clostridium kogasense Shin et al. 2021
Clostridium lacusfryxellense Spring et al. 2003
Clostridium lentum Liu et al. 2022
Clostridium liquoris Yin et al. 2016
Clostridium ljungdahlii Tanner et al. 1993
Clostridium lundense Cirne et al. 2006
Clostridium luticellarii Wang et al. 2015
Clostridium magnum Schink 1984
Clostridium malenominatum (Weinberg et al. 1937) Spray 1948
Clostridium massiliamazoniense Dione et al. 2020
Clostridium massiliodielmoense Tidjani Alou et al. 2016
Clostridium maximum (Lindner 1888) Lawson and Rainey 2016
Clostridium mediterraneense Ndongo et al. 2017
Clostridium mobile Li et al. 2022
Clostridium moniliforme (Repaci 1910) Lawson and Rainey 2016
Clostridium muellerianum Doyle et al. 2022
Clostridium neonatale Bernard et al. 2018
Clostridium neuense Zhao et al. 2017
Clostridium niameyense Chabou et al. 2018
Clostridium nigeriense Alou et al. 2018
Clostridium nitritogenes (Prévot 1940) Bernard et al. 2018
Clostridium nitrophenolicum Suresh et al. 2007
Clostridium novyi (Migula 1894) Bergey et al. 1923
Clostridium oceanicum Smith 1970
Clostridium oryzae Horino et al. 2015
Clostridium pabulibutyricum Kobayashi et al. 2017
Clostridium paraputrificum (Bienstock 1906) Snyder 1936
Clostridium paridis Li et al. 2022
Clostridium pascui Wilde et al. 1997
Clostridium pasteurianum Winogradsky 1895
Clostridium peptidivorans Mechichi et al. 2000
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937
Clostridium polyendosporum (Duda et al. 1996) Rainey et al. 2016
Clostridium polynesiense Sankar et al. 2023
Clostridium porci Wylensek et al. 2021
Clostridium prolinivorans Huang et al. 2020
Clostridium psychrophilum Spring et al. 2003
Clostridium punense Lanjekar et al. 2015
Clostridium puniceum Lund et al. 1981
Clostridium putrefaciens (McBryde 1911) Sturges and Drake 1927
Clostridium quinii Svensson et al. 1995
Clostridium rhizosphaerae Li et al. 2022
Clostridium saccharobutylicum Keis et al. 2001
Clostridium saccharoperbutylacetonicum Keis et al. 2001
Clostridium sardiniense Prévot 1938
Clostridium sartagoforme Partansky and Henry 1935
Clostridium saudiense Angelakis et al. 2016
Clostridium scatologenes (Weinberg and Ginsbourg 1927) Prévot 1948
Clostridium schirmacherense Alam et al. 2006
Clostridium senegalense Mishra et al. 2015
Clostridium septicum (Mace 1889) Ford 1927
Clostridium simiarum Li et al. 2022
Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923
Clostridium subterminale (Hall and Whitehead 1927) Spray 1948
Clostridium sulfidigenes Sallam and Steinbüchel 2009
Clostridium swellfunianum Liu et al. 2015
Clostridium taeniosporum Krasil'nikov et al. 1968
Clostridium tagluense Suetin et al. 2009
Clostridium tarantellae (Udey et al. 1977) Lawson and Rainey 2016
Clostridium tepidum Dobritsa et al. 2017
Clostridium tertium (Henry 1917) Bergey et al. 1923
Clostridium tetani (Flügge 1886) Bergey et al. 1923
Clostridium tetanomorphum (ex Bulloch et al. 1919) Wilde et al. 1989
Clostridium thailandense Chaikitkaew et al. 2022
Clostridium thermarum Liu et al. 2021
Clostridium thermobutyricum Wiegel et al. 1989
Clostridium thermopalmarium Soh et al. 1991
Clostridium thiosulfatireducens Hernandez-Eugenio et al. 2002
Clostridium tunisiense Thabet et al. 2004
Clostridium tyrobutyricum van Beynum and Pette 1935
Clostridium uliginosum Matthies et al. 2001
Clostridium ventriculi (Goodsir 1842) Lawson and Rainey 2016
Clostridium vincentii Mountfort et al. 1997
Clostridium vulturis Paek et al. 2015
Clostridium weizhouense Li et al. 2022
Clostridium yunnanense Li et al. 2022
Clostridium zeae Kobayashi et al. 2021
CM001240_s
CP002410_s
CP003261_s
CP013243_s
CP025746_s
CP029329_s
CP029758_s
CP033465_s
CP035280_s
DQ125892_s
DQ129391_s
DQ168831_s
DQ196631_s
DQ521480_s
DQ796080_s
EF088329_s
EF512134_s
EF515406_s
EU434651_s
EU461309_s
EU470949_s
EU471098_s
EU471513_s
EU509793_s
EU763600_s
EU773123_s
EU774188_s
EU775592_s
EU777420_s
EU828395_s
Eubacterium multiforme (Distaso 1911) Holdeman and Moore 1970
FJ189568_s
FJ382239_s
FJ680032_s
FJ680345_s
FJ680409_s
FJ715993_s
FM205005_s
GQ135847_s
GQ136756_s
GQ360027_s
GQ487902_s
GQ487937_s
GU293218_s
GU559769_s
GU559771_s
GU559792_s
GU559840_s
GU907812_s
GU907820_s
HM131959_s
HM366517_s
HQ741718_s
HQ745617_s
HQ748119_s
HQ808504_s
HQ808941_s
HQ808991_s
Ilyobacter delafieldii Janssen and Harfoot 1991
JF027036_s
JF089087_s
JF180412_s
JF181194_s
JF185927_s
JF504706_s
JF775632_s
JF920352_s
JN030529_s
JN379402_s
JN397732_s
JN540203_s
JN540215_s
JN540244_s
JN650228_s
JN680634_s
JN792368_s
JQ607950_s
JX048101_s
JX133430_s
JX223038_s
JX223060_s
JX223165_s
JX223176_s
JX223228_s
JX224231_s
JX504955_s
JX504967_s
JX504976_s
JX628613_s
JX853188_s
KE993469_s
LAQZ_s
LITJ_s
MCGV_s
PAC002236_s
PAC002739_s
PAC002760_s
PAC002817_s
PAC003078_s
RJLQ_s
SULJ_s
Y15985_s
Clostridium_g18
Clostridium facile Liu et al. 2022
Clostridium methylpentosum Himelbloom and Canale-Parola 1989
EU381542_s
EU381752_s
EU381961_s
HM630225_s
PAC001521_s
PAC003097_s
Desnuesiella Hadjadj et al. 2016
Desnuesiella massiliensis Hadjadj et al. 2016
EU517557_g
CU921738_s
CU922917_s
EU517557_s
FJ670702_s
FJ670920_s
FJ670949_s
HE575990_s
JQ996644_s
Fervidicella Ogg and Patel 2010
Fervidicella metallireducens Ogg and Patel 2010
FN436134_g
AY261814_s
FN436134_s
JQ079818_s
Fonticella Fraj et al. 2013
Fonticella tunisiensis Fraj et al. 2013
GQ135611_g
GQ135611_s
GQ906580_g
DQ129400_s
GQ906580_s
JF183715_s
Haloimpatiens Wu et al. 2016
Clostridium tepidiprofundi Slobodkina et al. 2008
Haloimpatiens lingqiaonensis Wu et al. 2016
Haloimpatiens massiliensis Anani et al. 2020
JN520595_s
JN539549_s
JQ670716_s
Hathewaya Lawson and Rainey 2016
Hathewaya histolytica (Weinberg and Séguin 1916) Lawson and Rainey 2016
Hathewaya limosa (André 1948) Lawson and Rainey 2016
Hathewaya massiliensis Tall et al. 2020
Hathewaya proteolytica (Jain and Zeikus 1988) Lawson and Rainey 2016
Inconstantimicrobium Wylensek et al. 2021
AB294938_s
Inconstantimicrobium porci Wylensek et al. 2021
JN653049_g
JN653049_s
Oceanirhabdus Pi et al. 2013
AB470963_s
EU236399_s
EU488051_s
JQ670712_s
Oceanirhabdus sediminicola Pi et al. 2013
Oxobacter Collins et al. 1994
AB637332_s
AB742083_s
DQ069222_s
FN563341_s
FN667395_s
JF175684_s
JN540223_s
JN540253_s
JN540273_s
JN825544_s
JX102512_s
Oxobacter pfennigii (Krumholz and Bryant 1985) Collins et al. 1994
PAC002037_g
DQ125742_s
DQ676295_s
FJ936807_s
JX505369_s
PAC002037_s
Proteiniclasticum Zhang et al. 2010
DQ677013_s
EF174499_s
EU244054_s
FOVK_s
GQ135320_s
GU455105_s
JX391609_s
JX559184_s
Proteiniclasticum aestuarii Namirimu et al. 2022
Proteiniclasticum ruminis Zhang et al. 2010
Proteiniclasticum sediminis Liu et al. 2021
Youngiibacter Lawson et al. 2014
Youngiibacter fragilis Lawson et al. 2014
Youngiibacter multivorans Lawson et al. 2014
Data type count
  • 0
    Genome
  • 0
    16S rRNA