Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Enterobacteriaceae Rahn 1937
Adiaceo Darby et al. 2005
Adiaceo aphidicola Darby et al. 2005
Baumannia Moran et al. 2003
Baumannia cicadellinicola Moran et al. 2003
Biostraticola Verbarg et al. 2008
Biostraticola tofi Verbarg et al. 2008
Blochmannia Sauer et al. 2000
Blochmannia fellah de Souza et al. 2009
Blochmannia festinatus Wernegreen et al. 2003
Blochmannia floridanus Sauer et al. 2000
Blochmannia herculeanus Sauer et al. 2000
Blochmannia pennsylvanicus Degnan et al. 2005
Blochmannia rufipes Sauer et al. 2000
Blochmannia vafer Degnan et al. 2004
Buttiauxella Ferragut et al. 1982
Buttiauxella agrestis Ferragut et al. 1982
Buttiauxella brennerae Müller et al. 1996
Buttiauxella chrysanthemi Furlan et al. 2018
Buttiauxella ferragutiae Müller et al. 1996
Buttiauxella gaviniae Müller et al. 1996
Buttiauxella izardii Müller et al. 1996
Buttiauxella noackiae Müller et al. 1996
Buttiauxella warmboldiae Müller et al. 1996
Cedecea Grimont et al. 1981
Cedecea davisae Grimont et al. 1981
Cedecea neteri Farmer et al. 1983
Citrobacter Werkman and Gillen 1932
Cedecea lapagei Grimont et al. 1981
Citrobacter amalonaticus (Young et al. 1971) Brenner and Farmer 1982
Citrobacter bitternis Ko et al. 2015
Citrobacter braakii Brenner et al. 1993
Citrobacter europaeus Ribeiro et al. 2017
Citrobacter farmeri Brenner et al. 1993
Citrobacter freundii (Braak 1928) Werkman and Gillen 1932
Citrobacter gillenii Brenner et al. 2000
Citrobacter koseri Frederiksen 1970
Citrobacter murliniae Brenner et al. 2000
Citrobacter pasteurii Clermont et al. 2015
Citrobacter portucalensis Ribeiro et al. 2017
Citrobacter rodentium Schauer et al. 1996
Citrobacter sedlakii Brenner et al. 1993
Citrobacter werkmanii Brenner et al. 1993
Citrobacter youngae Brenner et al. 1993
Cronobacter Iversen et al. 2008
Cronobacter condimenti Joseph et al. 2012
Cronobacter dublinensis Iversen et al. 2008
Cronobacter malonaticus Iversen et al. 2008
Cronobacter muytjensii Iversen et al. 2008
Cronobacter sakazakii (Farmer et al. 1980) Iversen et al. 2008
Cronobacter turicensis Iversen et al. 2008
Cronobacter universalis Joseph et al. 2012
Curculioniphilus Toju et al. 2009
Curculioniphilus buchneri Toju et al. 2009
Ecksteinia Toenshoff et al. 2012
Ecksteinia adelgidicola Toenshoff et al. 2012
Edaphovirga Xue et al. 2019
Edaphovirga cremea Xue et al. 2019
Enterobacillus Patil et al. 2015
Enterobacillus tribolii Patil et al. 2015
Enterobacter Hormaeche and Edwards 1960
Enterobacter asburiae Brenner et al. 1988
Enterobacter bugandensis Doijad et al. 2016
Enterobacter cancerogenus (Urosevic 1966) Dickey and Zumoff 1988
Enterobacter chengduensis Wu et al. 2019
Enterobacter chuandaensis Wu et al. 2019
Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960
Enterobacter hormaechei O'Hara et al. 1990
Enterobacter huaxiensis Wu et al. 2019
Enterobacter kobei Kosako et al. 1997
Enterobacter ludwigii Hoffmann et al. 2005
Enterobacter mori Zhu et al. 2011
Enterobacter roggenkampii Sutton et al. 2018
Enterobacter siamensis Khunthongpan et al. 2014
Enterobacter sichuanensis Wu et al. 2018
Enterobacter soli Manter et al. 2011
Enterobacter tabaci Duan et al. 2015
Enterobacter timonensis Tidjani Alou et al. 2017
Escherichia Castellani and Chalmers 1919
Escherichia albertii Huys et al. 2003
Escherichia coli (Migula 1895) Castellani and Chalmers 1919
Escherichia fergusonii Farmer et al. 1985
Escherichia hermannii Brenner et al. 1983
Escherichia marmotae Liu et al. 2015
Shigella boydii Ewing 1949
Shigella dysenteriae (Shiga 1898) Castellani and Chalmers 1919
Shigella flexneri Castellani and Chalmers 1919
Shigella sonnei (Levine 1920) Weldin 1927
Franconibacter Stephan et al. 2014
Franconibacter daqui Gao et al. 2017
Franconibacter helveticus (Stephan et al. 2007) Stephan et al. 2014
Franconibacter pulveris (Stephan et al. 2008) Stephan et al. 2014
Gibbsiella Brady et al. 2011
Gibbsiella dentisursi Saito et al. 2013
Gibbsiella greigii Brady et al. 2015
Gibbsiella quercinecans Brady et al. 2011
Hamiltonella Moran et al. 2005
Hamiltonella defensa Moran et al. 2005
Klebsiella Trevisan 1885
Klebsiella aerogenes (Hormaeche and Edwards 1960) Tindall et al. 2017
Klebsiella africana Rodrigues et al. 2019
Klebsiella granulomatis (Aragao and Vianna 1913) Carter et al. 1999
Klebsiella grimontii Passet and Brisse 2018
Klebsiella huaxiensis Hu et al. 2019
Klebsiella michiganensis Saha et al. 2013
Klebsiella oxytoca (Flügge 1886) Lautrop 1956
Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887
Klebsiella quasipneumoniae Brisse et al. 2014
Klebsiella quasivariicola Long et al. 2017
Klebsiella singaporensis Li et al. 2004
Klebsiella variicola Rosenblueth et al. 2004
Kluyvera intestini Tetz and Tetz 2016
Kleidoceria Küchler et al. 2010
Kleidoceria schneideri Küchler et al. 2010
Kluyvera Farmer et al. 1981
Kluyvera ascorbata Farmer et al. 1981
Kluyvera cryocrescens Farmer et al. 1981
Kluyvera georgiana Müller et al. 1996
Kluyvera intermedia (Izard et al. 1980) Pavan et al. 2005
Kosakonia Brady et al. 2013
Enterobacter lignolyticus Deangelis et al. 2011
Kosakonia arachidis (Madhaiyan et al. 2010) Brady et al. 2013
Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013
Kosakonia oryzae (Peng et al. 2009) Brady et al. 2013
Kosakonia oryzendophytica (Hardoim et al. 2015) Li et al. 2016
Kosakonia oryziphila (Hardoim et al. 2015) Li et al. 2016
Kosakonia pseudosacchari Kämpfer et al. 2018
Kosakonia quasisacchari Wang et al. 2999
Kosakonia radicincitans (Kämpfer et al. 2005) Brady et al. 2013
Kosakonia sacchari (Zhu et al. 2013) Gu et al. 2014
Microvirga calopogonii Wang et al. 2019
Leclercia Tamura et al. 1987
Leclercia adecarboxylata (Leclerc 1962) Tamura et al. 1987
Lelliottia Brady et al. 2013
Lelliottia amnigena (Izard et al. 1981) Brady et al. 2013
Lelliottia jeotgali Yuk et al. 2018
Lelliottia nimipressuralis (Carter 1945) Brady et al. 2013
Mangrovibacter Rameshkumar et al. 2010
Mangrovibacter phragmitis Behera et al. 2017
Mangrovibacter plantisponsor Rameshkumar et al. 2010
Mangrovibacter yixingensis Zhang et al. 2015
Metakosakonia Alnajar and Gupta 2017
Metakosakonia massiliensis (Lagier et al. 2014) Alnajar and Gupta 2017
Moranella McCutcheon and von Dohlen 2011
Moranella endobia McCutcheon and von Dohlen 2011
Nissabacter Mlaga et al. 2017
Nissabacter archeti Mlaga et al. 2017
Phytobacter Zhang et al. 2017
Phytobacter diazotrophicus Zhang et al. 2017
Phytobacter ursingii Pillonetto et al. 2018
Plesiomonas Habs and Schubert 1962
Plesiomonas shigelloides (Bader 1954) Habs and Schubert 1962
Pluralibacter Brady et al. 2013
Pluralibacter gergoviae (Brenner et al. 1980) Brady et al. 2013
Pluralibacter pyrinus (Chung et al. 1993) Brady et al. 2013
Pseudescherichia Alnajar and Gupta 2017
Pseudescherichia vulneris (Brenner et al. 1983) Alnajar and Gupta 2017
Pseudocitrobacter Kämpfer et al. 2014
Pseudocitrobacter anthropi Kämpfer et al. 2014
Pseudocitrobacter faecalis Kämpfer et al. 2014
Puchtella Fukatsu et al. 2009
Puchtella pedicinophila Fukatsu et al. 2009
Raoultella Drancourt et al. 2001
Raoultella electrica Kimura et al. 2014
Raoultella ornithinolytica (Sakazaki et al. 1989) Drancourt et al. 2001
Raoultella planticola (Bagley et al. 1982) Drancourt et al. 2001
Raoultella terrigena (Izard et al. 1981) Drancourt et al. 2001
Riesia Allen et al. 2007
Riesia pediculicola Allen et al. 2007
Riesia pthiripubis Allen et al. 2007
Rohrkolberia Kuechler et al. 2011
Rohrkolberia cinguli Kuechler et al. 2011
Rosenbergiella Halpern et al. 2013
Rosenbergiella australiborealis Lenaerts et al. 2017
Rosenbergiella collisarenosi Lenaerts et al. 2017
Rosenbergiella epipactidis Lenaerts et al. 2017
Rosenbergiella nectarea Halpern et al. 2013
Salmonella Lignieres 1900
Salmonella bongori (Le Minor et al. 1985) Reeves et al. 1989
Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987
Salmonella subterranea Shelobolina et al. 2005
Schneideria Matsuura et al. 2012
Schneideria nysicola Matsuura et al. 2012
Shimwellia Priest and Barker 2010
Shimwellia blattae (Burgess et al. 1973) Priest and Barker 2010
Shimwellia pseudoproteus Priest and Barker 2010
Superficieibacter Potter et al. 2018
Superficieibacter electus Potter et al. 2018
Trabulsiella McWhorter et al. 1992
Trabulsiella guamensis McWhorter et al. 1992
Trabulsiella odontotermitis Chou et al. 2007
Yokenella Kosako et al. 1985
Yokenella regensburgei Kosako et al. 1985
Data type count
  • 0
    Genome
  • 0
    16S rRNA