Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root
Bacteria Woese et al. 1990
Acidobacteria Cavalier-Smith 2002
Acidobacteriia Cavalier-Smith 2002
Blastocatellia Pascual et al. 2016
Holophagae Fukunaga et al. 2008
Solibacteres No information
Actinobacteria Stackebrandt et al. 1997
Acidimicrobiia Norris 2013
Actinobacteria_c Stackebrandt et al. 1997
Coriobacteriia König 2013
Nitriliruptoria Ludwig et al. 2013
Rubrobacteria Suzuki 2013
Thermoleophilia Suzuki and Whitman 2013
AD3
Aquificae Reysenbach 2002
Aquificae_c Reysenbach 2002
Armatimonadetes Tamaki et al. 2011
Armatimonadia Tamaki et al. 2011
Chthonomonadetes Lee et al. 2011
Fimbriimonadia Im et al. 2012
Bacteroidetes Krieg et al. 2012
Bacteroidia Krieg 2012
Cytophagia Nakagawa 2012
Flavobacteria Cavalier-Smith 1998
Sphingobacteriia Kämpfer 2012
Berkelbacteria Wrighton et al. 2014
BH1
Caldiserica Mori et al. 2009
Caldisericia Mori et al. 2009
Calescamantes Rinke et al. 2013
Chlamydiae Garrity and Holt 2012
Chlamydiae_c Garrity and Holt 2012
Chlorobi Iino et al. 2010
Chlorobia Garrity and Holt 2001
Ignavibacteriae Podosokorskaya et al. 2013
Chloroflexi Garrity and Holt 2001
Anaerolineae Yamada et al. 2006
Ardenticatenia Kawaichi et al. 2013
Caldilineae Yamada et al. 2006
Chloroflexia Gupta et al. 2013
Dehalococcoidia Loffler et al. 2013
Ktedonobacteria Cavaletti et al. 2007
Thermoflexia Dodsworth et al. 2014
Thermomicrobia Garrity and Holt 2002
Chrysiogenetes Garrity and Holt 2002
Chrysiogenetes_c Garrity and Holt 2002
CPR2 Brown et al. 2015
CPR3 Brown et al. 2015
Deferribacteres Garrity and Holt 2002
Deferribacteres_c Huber and Stetter 2002
Deinococci Garrity and Holt 2002
Dictyoglomi Patel 2012
Dictyoglomia Patel 2012
Elusimicrobia Geissinger et al. 2010
Endomicrobia Zheng et al. 2018
Fervidibacteria Rinke et a. 2013
Fibrobacteres Garrity and Holt 2012
Chitinispirillia Sorokin et al. 2016
Chitinivibrionia Sorokin et al. 2014
Fibrobacteria Spain et al. 2012
Firmicutes Gibbons and Murray 1978
Bacilli Ludwig et al. 2010
Clostridia Rainey 2010
Erysipelotrichi Ludwig et al. 2010
Limnochordia Watanabe et al. 2015
Negativicutes Marchandin et al. 2010
Thermolithobacteria Sokolova et al. 2007
Tissierellia Alauzet et al. 2014
Fusobacteria Garrity and Holt 2012
Gemmatimonadetes Zhang et al. 2003
Longimicrobia Pascual et al. 2016
JS1
Lentisphaerae Cho et al. 2004
Lentisphaeria Cho et al. 2012
Oligosphaeria Qiu et al. 2013
Nitrospirae Garrity and Holt 2001
OP2
Peregrinibacteria Brown et al. 2015
Peribacteria Anantharaman et al. 2016
Planctomycetes Garrity and Holt 2001
Phycisphaerae Fukunaga et al. 2010
Planctomycetia Ward 2011
Proteobacteria Garrity et al. 2005
Acidithiobacillia Williams and Kelly 2013
Alphaproteobacteria Garrity et al. 2006
Betaproteobacteria Garrity et al. 2006
Deltaproteobacteria Kuever et al. 2006
Epsilonproteobacteria Garrity et al. 2006
Gammaproteobacteria Garrity et al. 2005
Hydrogenophilalia Boden et al. 2017
Oligoflexia Nakai et al. 2014
Zetaproteobacteria Emerson et al. 2007
Rhodothermaeota Munoz et al. 2016
Balneolia Munoz et al. 2017
Rhodothermia Munoz et al. 2017
Spirochaetes Cavalier-Smith 2002
Spirochaetia Paster 2011
SR1
Synergistetes Jumas-Bilak et al. 2009
Synergistia Jumas-Bilak et al. 2009
Tenericutes Murray 1984
Mollicutes Edward and Freundt 1967
Thermodesulfobacteria Garrity and Holt 2001
Thermotogae Reysenbach 2001
TM6
Verrucomicrobia Hedlund 2012
Kiritimatiellae Spring et al. 2017
Opitutae Choo et al. 2007
Spartobacteria Sangwan et al. 2004
Verrucomicrobiae Hedlund et al. 1998
WS1
WS5
WS6
Data type count
  • 0
    Genome
  • 0
    16S rRNA