Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales
Oxalobacteraceae Garrity et al. 2006
AB486719_g
AB486691_s
AB486719_s
FJ264587_s
Actimicrobium Kim et al. 2021
Actimicrobium antarcticum Kim et al. 2021
AF468349_s
Aquaspirillum arcticum Butler et al. 1990
EU636041_s
JN023691_s
AJ012069_g
AJ012069_s
AJ575697_g
AJ575697_s
AVCC_g
AVCC_s
Collimonas de Boer et al. 2004
Collimonas antrihumi Lee 2018
Collimonas arenae Höppener-Ogawa et al. 2008
Collimonas fungivorans de Boer et al. 2004
Collimonas humicola Li et al. 2021
Collimonas pratensis Höppener-Ogawa et al. 2008
Collimonas silvisoli Li et al. 2021
CP002745_s
CP009962_s
FNOR_s
VIVV_s
DQ264588_g
DQ264588_s
DQ351915_g
DQ351915_s
DQ469209_g
DQ469209_s
Duganella Hiraishi et al. 1997
Duganella aceris Jeon et al. 2021
Duganella alba Lu et al. 2020
Duganella aquatilis Lu et al. 2020
Duganella callida Raths et al. 2021
Duganella danionis (Kämpfer et al. 2016) Lu et al. 2020
Duganella dendranthematis Heo et al. 2022
Duganella fentianensis Lu et al. 2020
Duganella flavida Lu et al. 2020
Duganella guangzhouensis Lu et al. 2020
Duganella lactea Lu et al. 2020
Duganella levis Lu et al. 2020
Duganella margarita Lu et al. 2020
Duganella phyllosphaerae Kämpfer et al. 2012
Duganella qianjiadongensis Lu et al. 2020
Duganella radicis Madhaiyan et al. 2013
Duganella rivi Lu et al. 2020
Duganella sacchari Madhaiyan et al. 2013
Duganella vulcania Lu et al. 2022
Duganella zoogloeoides Hiraishi et al. 1997
FNEQ_s
LMLM_s
EF516828_g
EF516828_s
EU266905_g
DQ676429_s
EU266905_s
FM178829_g
FM178829_s
Glaciimonas Zhang et al. 2011
Glaciimonas alpina Frasson et al. 2015
Glaciimonas frigoris Margesin et al. 2016
Glaciimonas immobilis Zhang et al. 2011
Glaciimonas singularis Chung et al. 2013
Glaciimonas soli Huang et al. 2020
GU295961_g
GU295961_s
GU563773_g
GU563773_s
Herbaspirillum Baldani et al. 1986
AKJA_s
AKJW_s
CP022736_s
Herbaspirillum aquaticum Dobritsa et al. 2010
Herbaspirillum autotrophicum (Aragno and Schlegel 1978) Ding and Yokota 2004
Herbaspirillum camelliae Liu et al. 2020
Herbaspirillum chlorophenolicum Im et al. 2004
Herbaspirillum frisingense Kirchhof et al. 2001
Herbaspirillum hiltneri Rothballer et al. 2006
Herbaspirillum huttiense (Leifson 1962) Ding and Yokota 2004
Herbaspirillum lusitanum Valverde et al. 2003
Herbaspirillum piri Xu et al. 2018
Herbaspirillum rhizosphaerae Jung et al. 2007
Herbaspirillum robiniae Fan et al. 2018
Herbaspirillum rubrisubalbicans (Christopher and Edgerton 1930) Baldani et al. 1996
Herbaspirillum seropedicae Baldani et al. 1986
JAELUH_s
SPNJ_s
VFNG_s
Herminiimonas Fernandes et al. 2005
AF407411_s
Herminiimonas aquatilis Kämpfer et al. 2006
Herminiimonas arsenicoxydans Muller et al. 2006
Herminiimonas arsenitoxidans Koh et al. 2017
Herminiimonas contaminans Kämpfer et al. 2013
Herminiimonas fonticola Fernandes et al. 2005
Herminiimonas glaciei Loveland-Curtze et al. 2009
Herminiimonas saxobsidens Lang et al. 2007
Janthinobacterium De Ley et al. 1978
AHHB_s
CP011319_s
CP033019_s
CP035311_s
FTMV_s
Janthinobacterium agaricidamnosum Lincoln et al. 1999
Janthinobacterium aquaticum Lu et al. 2020
Janthinobacterium kumbetense Inan Bektas et al. 2023
Janthinobacterium lividum (Eisenberg 1891) De Ley et al. 1978
Janthinobacterium psychrotolerans Gong et al. 2017
Janthinobacterium rivuli Lu et al. 2020
Janthinobacterium svalbardensis Avgustin et al. 2012
Janthinobacterium tructae Jung et al. 2021
Janthinobacterium violaceinigrum Lu et al. 2020
JF766456_s
JFYR_s
JQNP_s
LBCO_s
PHUG_s
PJMQ_s
KB467824_g
KB467824_s
Lacisediminimonas Wu et al. 2020
Lacisediminimonas profundi Wu et al. 2020
Massilia La Scola et al. 2000
CP012201_s
CP050451_s
CP062941_s
Empedobacter haloabium Konishi et al. 1984
FOOF_s
FQWU_s
HQ450148_s
JQNN_s
LELH_s
LMDB_s
LMDJ_s
LMEC_s
LMFZ_s
Massilia aerilata Weon et al. 2008
Massilia agilis Altankhuu and Kim 2017
Massilia agri Chaudhary and Kim 2017
Massilia agrisoli Huq et al. 2023
Massilia albidiflava Zhang et al. 2006
Massilia alkalitolerans (Xu et al. 2005) Kämpfer et al. 2011
Massilia antarctica Sedláček et al. 2022
Massilia aquatica Holochová et al. 2020
Massilia arenae Zhang et al. 2020
Massilia arenosa Raths et al. 2020
Massilia armeniaca Ren et al. 2018
Massilia aromaticivorans Son et al. 2021
Massilia arvi Singh et al. 2015
Massilia atriviolacea Yang et al. 2019
Massilia aurea Gallego et al. 2006
Massilia brevitalea Zul et al. 2008
Massilia buxea Sun et al. 2017
Massilia cavernae Zhu et al. 2022
Massilia chloroacetimidivorans Lee et al. 2017
Massilia consociata Kämpfer et al. 2011
Massilia dura Zhang et al. 2006
Massilia eburnea (Jin et al. 2017) Lu et al. 2020
Massilia eurypsychrophila Shen et al. 2015
Massilia flava Wang et al. 2012
Massilia forsythiae Heo et al. 2022
Massilia frigida Holochová et al. 2020
Massilia ginsengisoli (Zhang et al. 2016) Lu et al. 2020
Massilia glaciei Gu et al. 2017
Massilia guangdongensis Lu et al. 2020
Massilia haematophila (Kämpfer et al. 2008) Kämpfer et al. 2011
Massilia horti Peta et al. 2021
Massilia humi Du and Yin 2016
Massilia jejuensis Weon et al. 2010
Massilia kyonggiensis Kim 2014
Massilia lurida Luo et al. 2013
Massilia lutea Zhang et al. 2006
Massilia mucilaginosa Holochová et al. 2020
Massilia namucuonensis Kong et al. 2013
Massilia neuiana Zhao et al. 2017
Massilia niabensis Weon et al. 2009
Massilia niastensis Weon et al. 2009
Massilia norwichensis Orthová et al. 2015
Massilia oculi Kämpfer et al. 2012
Massilia phosphatilytica Zheng et al. 2017
Massilia phyllostachyos Yue et al. 2023
Massilia pinisoli Altankhuu and Kim 2016
Massilia plicata Zhang et al. 2006
Massilia polaris Dahal et al. 2021
Massilia psychrophila Guo et al. 2016
Massilia puerhi Yang et al. 2021
Massilia putida Feng et al. 2016
Massilia rhizosphaerae Li et al. 2021
Massilia rivuli Lu et al. 2020
Massilia rubra Holochová et al. 2020
Massilia soli Baek et al. 2022
Massilia solisilvae Altankhuu and Kim 2017
Massilia suwonensis (Weon et al. 2010) Kämpfer et al. 2011
Massilia terrae Altankhuu and Kim 2017
Massilia tieshanensis Du et al. 2012
Massilia timonae La Scola et al. 2000
Massilia umbonata Rodríguez-Díaz et al. 2014
Massilia varians (Kämpfer et al. 2008) Kämpfer et al. 2011
Massilia violacea Embarcadero-Jiménez et al. 2016
Massilia violaceinigra Wang et al. 2018
Massilia yuzhufengensis Shen et al. 2013
Pseudoduganella aquatica Lu et al. 2022
Pseudoduganella violaceinigra (Li et al. 2004) Kämpfer et al. 2012
SMBW_s
Noviherbaspirillum Lin et al. 2013
CP040128_s
DQ158104_s
Herbaspirillum denitrificans Ishii et al. 2017
LMHZ_s
Noviherbaspirillum aerium Xue et al. 2020
Noviherbaspirillum agri Chaudhary and Kim 2017
Noviherbaspirillum arenae Peta et al. 2021
Noviherbaspirillum aridicola Khan et al. 2022
Noviherbaspirillum aurantiacum (Carro et al. 2012) Lin et al. 2013
Noviherbaspirillum autotrophicum Ishii et al. 2017
Noviherbaspirillum canariense (Carro et al. 2012) Lin et al. 2013
Noviherbaspirillum cavernae Zhu et al. 2021
Noviherbaspirillum galbum Park et al. 2021
Noviherbaspirillum humi Sundararaman et al. 2017
Noviherbaspirillum malthae Lin et al. 2013
Noviherbaspirillum massiliense (Lagier et al. 2014) Ishii et al. 2017
Noviherbaspirillum pedocola Chaudhary et al. 2021
Noviherbaspirillum psychrotolerans (Bajerski et al. 2013) Lin et al. 2013
Noviherbaspirillum saxi Zhu et al. 2021
Noviherbaspirillum sedimenti Zhu et al. 2021
Noviherbaspirillum soli (Carro et al. 2012) Lin et al. 2013
Noviherbaspirillum suwonense Kim et al. 2014
Oxalicibacterium Tamer et al. 2003
Oxalicibacterium faecigallinarum Sahin et al. 2009
Oxalicibacterium flavum Tamer et al. 2003
Oxalicibacterium horti Sahin et al. 2009
Oxalicibacterium solurbis Sahin et al. 2010
Oxalobacter Allison et al. 1985
AB288876_s
EF454731_s
FJ374254_s
Oxalobacter aliiformigenes Chmiel et al. 2022
Oxalobacter formigenes Allison et al. 1985
Oxalobacter paeniformigenes Chmiel et al. 2022
Oxalobacter paraformigenes Chmiel et al. 2022
Oxalobacter vibrioformis Dehning and Schink 1990
Paraherbaspirillum Anandham et al. 2013
Paraherbaspirillum soli Anandham et al. 2013
Paucimonas Jendrossek 2001
DQ337029_s
EF580950_s
EU802136_s
GU134931_s
PAC000247_s
Paucimonas lemoignei (Delafield et al. 1965) Jendrossek 2001
Profftella Nakabachi et al. 2013
Profftella armatura Nakabachi et al. 2013
REGP_g
REGP_s
Rugamonas Austin and Moss 1987
FODC_s
KB906725_s
LMNW_s
Rugamonas apoptosis Lu et al. 2022
Rugamonas aquatica Lu et al. 2020
Rugamonas brunnea Lu et al. 2022
Rugamonas fusca Lu et al. 2022
Rugamonas rivuli Lu et al. 2020
Rugamonas rubra Austin and Moss 1987
Rugamonas violacea Sedláček et al. 2021
Sapientia Felföldi et al. 2020
JF033328_s
Sapientia aquatica Felföldi et al. 2020
Solimicrobium Margesin et al. 2018
PAC000325_s
Solimicrobium silvestre Margesin et al. 2018
Telluria Bowman et al. 1993
Telluria chitinolytica Bowman et al. 1993
Telluria mixta (Bowman et al. 1989) Bowman et al. 1993
Undibacterium Kämpfer et al. 2007
AP018439_s
AP018441_s
FR691002_s
GQ388794_s
JN790866_s
Undibacterium amnicola Chen et al. 2017
Undibacterium aquatile Du et al. 2015
Undibacterium arcticum Li et al. 2016
Undibacterium baiyunense Lu et al. 2021
Undibacterium crateris Phurbu et al. 2021
Undibacterium curvum Lu et al. 2021
Undibacterium danionis Kämpfer et al. 2016
Undibacterium fentianense Lu et al. 2021
Undibacterium flavidum Lu et al. 2021
Undibacterium griseum Lu et al. 2021
Undibacterium hunanense Lu et al. 2021
Undibacterium jejuense Kim et al. 2014
Undibacterium luofuense Lu et al. 2021
Undibacterium macrobrachii Sheu et al. 2014
Undibacterium nitidum Lu et al. 2021
Undibacterium oligocarboniphilum Eder et al. 2011
Undibacterium parvum Eder et al. 2011
Undibacterium pigrum Kämpfer et al. 2007
Undibacterium piscinae Lee et al. 2019
Undibacterium rivi Lu et al. 2021
Undibacterium rugosum Lu et al. 2021
Undibacterium seohonense Kim et al. 2014
Undibacterium squillarum Sheu et al. 2014
Undibacterium terreum Liu et al. 2013
Undibacterium umbellatum Lu et al. 2021
Y11585_g
EU881344_s
Y11585_s
Data type count
  • 0
    Genome
  • 0
    16S rRNA