Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Ruminococcaceae Rainey 2010
Acetanaerobacterium Chen and Dong 2004
Acetanaerobacterium elongatum Chen and Dong 2004
Acetivibrio Patel et al. 1980
Acetivibrio cellulolyticus Patel et al. 1980
Clostridium aldrichii Yang et al. 1990
Clostridium alkalicellulosi Zhilina et al. 2006
Clostridium clariflavum Shiratori et al. 2009
Clostridium straminisolvens Kato et al. 2004
Clostridium thermocellum Viljoen et al. 1926
Acutalibacter Lagkouvardos et al. 2016
Acutalibacter muris Lagkouvardos et al. 2016
Agathobaculum Ahn et al. 2016
Agathobaculum desmolans (Morris et al. 1986) Ahn et al. 2016
Butyricicoccus faecihominis Takada et al. 2016
Anaerobacterium Horino et al. 2014
Anaerobacterium chartisolvens Horino et al. 2014
Anaerofilum Zellner et al. 1996
Anaerofilum agile Zellner et al. 1996
Anaerofilum pentosovorans Zellner et al. 1996
Anaerotruncus Lawson et al. 2004
Anaerotruncus colihominis Lawson et al. 2004
Angelakisella Mailhe et al. 2017
Angelakisella massiliensis Mailhe et al. 2017
Butyricicoccus Eeckhaut et al. 2008
Butyricicoccus pullicaecorum Eeckhaut et al. 2008
Caproiciproducens Kim et al. 2015
Clostridium jeddahense Lagier et al. 2016
Clostridium leptum Moore et al. 1976
Clostridium merdae Ndongo et al. 2017
Clostridium sporosphaeroides Soriano and Soriano 1948
Cellulosibacter Watthanalamloet et al. 2012
Cellulosibacter alkalithermophilus Watthanalamloet et al. 2012
Clostridium thermosuccinogenes Drent et al. 1995
Clostridium caenicola Shiratori et al. 2009
Clostridium cellulolyticum Petitdemange et al. 1984
Clostridium hungatei Monserrate et al. 2001
Clostridium josui Sukhumavasi et al. 1988
Clostridium papyrosolvens Madden et al. 1982
Clostridium sufflavum Nishiyama et al. 2009
Clostridium termitidis Hethener et al. 1992
Ercella van Gelder et al. 2014
Ercella succinigenes van Gelder et al. 2014
Ethanoligenens Xing et al. 2006
Clostridium cellulosi He et al. 1991
Ethanoligenens harbinense Xing et al. 2006
Eubacterium coprostanoligenes Freier et al. 1994
Eubacterium siraeum Moore et al. 1976
Faecalibacterium Duncan et al. 2002
Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002
Fastidiosipila Falsen et al. 2005
Fastidiosipila sanguinis Falsen et al. 2005
Fournierella Togo et al. 2017
Fournierella massiliensis Togo et al. 2017
Harryflintia Petzoldt et al. 2016
Harryflintia acetispora Petzoldt et al. 2016
Herbivorax Koeck et al. 2016
Herbivorax saccincola Koeck et al. 2016
Hydrogenoanaerobacterium Song and Dong 2009
Mageeibacillus Austin et al. 2016
Mageeibacillus indolicus Austin et al. 2016
Massilioclostridium Lo et al. 2017
Clostridium methylpentosum Himelbloom and Canale-Parola 1989
Massilioclostridium coli Lo et al. 2017
Monoglobus Kim et al. 2017
Monoglobus pectinilyticus Kim et al. 2017
Neglecta Bessis et al. 2016
Neglecta timonensis Bessis et al. 2016
Oscillibacter Iino et al. 2007
Oscillibacter ruminantium Lee et al. 2013
Oscillibacter valericigenes Iino et al. 2007
Oscillospira guilliermondii Chatton and Perard 1913
Paludicola Li et al. 2017
Papillibacter Defnoun et al. 2000
Papillibacter cinnamivorans Defnoun et al. 2000
Phocea Ndongo et al. 2016
Phocea massiliensis Ndongo et al. 2016
Pseudobacteroides Horino et al. 2014
Pseudobacteroides cellulosolvens (Murray et al. 1984) Horino et al. 2014
Pseudoflavonifractor Carlier et al. 2010
Clostridium viride Buckel et al. 1995
Flavonifractor plautii (Séguin 1928) Carlier et al. 2010
Flintibacter butyricus Lagkouvardos et al. 2016
Intestinimonas butyriciproducens Kläring et al. 2013
Pseudoflavonifractor capillosus (Tissier 1908) Carlier et al. 2010
Ruminococcus Sijpesteijn 1948
Ruminococcus albus Hungate 1957
Ruminococcus callidus Holdeman and Moore 1974
Ruminococcus champanellensis Chassard et al. 2012
Ruminococcus flavefaciens Sijpesteijn 1948
Ruminococcus bromii Moore et al. 1972
Ruthenibacterium Shkoporov et al. 2016
Ruthenibacterium lactatiformans Shkoporov et al. 2016
Saccharofermentans Chen et al. 2010
Sporobacter Grech-Mora et al. 1996
Sporobacter termitidis Grech-Mora et al. 1996
Subdoligranulum Holmström et al. 2004
Gemmiger formicilis Gossling and Moore 1975
Subdoligranulum variabile Holmström et al. 2004
Data type count
  • 0
    Genome
  • 0
    16S rRNA