Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Firmicutes
Bacilli Ludwig et al. 2010
Bacillales Prévot 1953
Alicyclobacillaceae da Costa and Rainey 2010
Alicyclobacillus Wisotzkey et al. 1992
Collibacillus Jojima et al. 2023
EF016847_g
Effusibacillus Watanabe et al. 2014
Ferroacidibacillus Johnson et al. 2023
Kyrpidia Klenk et al. 2012
Sulfoacidibacillus Johnson et al. 2023
Tumebacillus Steven et al. 2008
Bacillaceae Fischer 1895
Aeribacillus Miñana-Galbis et al. 2010
Aidingibacillus Wang et al. 2021
Aliibacillus Xu et al. 2019
Alkalibacillus Jeon et al. 2005
Alkalicoccobacillus Joshi et al. 2022
Alkalicoccus Zhao et al. 2017
Alkalihalobacillus Patel and Gupta 2020
Alkalihalobacterium Joshi et al. 2022
Alkalihalophilus Joshi et al. 2022
Alkalilactibacillus Schmidt et al. 2016
Allobacillus Sheu et al. 2011
Alteribacillus Didari et al. 2012
Alteribacter Gupta et al. 2020
Amphibacillus Niimura et al. 1990
Anaerobacillus Zavarzina et al. 2010
Anoxybacillus Pikuta et al. 2000
Aquibacillus Amoozegar et al. 2014
Aquisalibacillus Márquez et al. 2008
Aureibacillus Liu et al. 2015
Bacillus Cohn 1872
Bacillus_g14
Bacillus_g28
Calculibacillus Min et al. 2021
Caldalkalibacillus Xue et al. 2006
Caldalkalibacillus_g1
Caldibacillus Coorevits et al. 2012
Caldifermentibacillus Yang et al. 2023
Cerasibacillus Nakamura et al. 2004
Compostibacillus Yu et al. 2015
Cytobacillus Patel and Gupta 2020
Desertibacillus Bhatt et al. 2017
Domibacillus Seiler et al. 2013
Ectobacillus Gupta et al. 2020
EF031089_g
EU090232_g
EU369167_g
Evansella Gupta et al. 2020
Falsibacillus Zhou et al. 2009
Fermentibacillus Hirota et al. 2016
Fervidibacillus Yang et al. 2023
Fictibacillus Glaeser et al. 2013
Filobacillus Schlesner et al. 2001
FN667148_g
FN667313_g
Fredinandcohnia Gupta et al. 2020
Geobacillus Nazina et al. 2001
Geomicrobium Echigo et al. 2010
Gottfriedia Gupta et al. 2020
GQ175337_g
Gracilibacillus Wainoe et al. 1999
Halalkalibacillus Echigo et al. 2007
Halalkalibacter Joshi et al. 2022
Halalkalibacterium Joshi et al. 2022
Halobacillus Spring et al. 1996
Halolactibacillus Ishikawa et al. 2005
Heyndrickxia Gupta et al. 2020
HM036044_g
Jeotgalibacillus Yoon et al. 2001
Jilinibacillus Liu et al. 2014
JX240840_g
Lederbergia Gupta et al. 2020
Lentibacillus Yoon et al. 2002
Litchfieldia Gupta et al. 2020
Litoribacterium Mahmoud et al. 2021
Lottiidibacillus Liu et al. 2020
Mangrovibacillus Sefrji et al. 2023
Margalitia Gupta et al. 2020
Marinococcus Hao et al. 1985
Massilibacterium Tidjani Alou et al. 2016
Melghiribacillus Addou et al. 2015
Mesobacillus Patel and Gupta 2020
Metabacillus Patel and Gupta 2020
Microaerobacter Khelifi et al. 2011
Natribacillus Echigo et al. 2012
Natronobacillus Sorokin et al. 2009
Neobacillus Patel and Gupta 2020
Niallia Gupta et al. 2020
Oceanobacillus Lu et al. 2002
Ornithinibacillus Mayr et al. 2006
Paenalkalicoccus Xu et al. 2022
Pallidibacillus Yang et al. 2023
Parageobacillus Aliyu et al. 2019
Paraliobacillus Ishikawa et al. 2003
Paralkalibacillus Hirota et al. 2017
Paucisalibacillus Nunes et al. 2006
Pelagirhabdus Sultanpuram et al. 2016
Peribacillus Patel and Gupta 2020
Perspicuibacillus Yang et al. 2023
Piscibacillus Tanasupawat et al. 2007
Polygonibacillus Hirota et al. 2016
Pontibacillus Lim et al. 2005
Pradoshia Saha et al. 2019
Priestia Gupta et al. 2020
Pseudalkalibacillus Joshi et al. 2022
Pseudogracilibacillus Glaeser et al. 2014
Pseudoneobacillus Kämpfer et al. 2022
Pueribacillus Wang et al. 2018
Radiobacillus Li et al. 2020
Robertmurraya Gupta et al. 2020
Rossellomorea Gupta et al. 2020
Rubeoparvulum Tidjani Alou et al. 2017
Saccharococcus Nystrand 1984
Salibacterium Reddy et al. 2015
Salicibibacter Jang et al. 2021
Salimicrobium Yoon et al. 2007
Salinibacillus Ren and Zhou 2005
Salipaludibacillus Sultanpuram and Mothe 2016
Salirhabdus Albuquerque et al. 2007
Salisediminibacterium Jiang et al. 2012
Saliterribacillus Amoozegar et al. 2013
Salsuginibacillus Carrasco et al. 2007
Schinkia Gupta et al. 2020
Sediminibacillus Carrasco et al. 2008
Shouchella Joshi et al. 2022
Siminovitchia Gupta et al. 2020
Sinibacillus Yang and Zhou 2014
Sinobaca Li et al. 2008
Streptohalobacillus Wang et al. 2011
Sutcliffiella Gupta et al. 2020
Swionibacillus Li et al. 2017
Tenuibacillus Ren and Zhou 2005
Tepidibacillus Slobodkina et al. 2014
Terribacillus An et al. 2007
Texcoconibacillus Ruiz-Romero et al. 2013
Thalassobacillus García et al. 2005
Thalassorhabdus Sultanpuram and Mothe 2018
Thermolongibacillus Cihan et al. 2014
Virgibacillus Heyndrickx et al. 1998
Vulcanibacillus L'Haridon et al. 2006
Weizmannia Gupta et al. 2020
Calditerricola_f
Calditerricola Moriya et al. 2011
Exiguobacterium_f
Exiguobacterium Collins et al. 1984
FN667382_f
FN667382_g
HM036033_f
HM036033_g
Hydrogenibacillus_f
AY518549_g
Carbonibacillus Kadnikov et al. 2019
Hydrogenibacillus Kämpfer et al. 2013
JQ337581_f
JQ337581_g
Listeriaceae Ludwig et al. 2010
Brochothrix Sneath and Jones 1976
Listeria Pirie 1940
Novibacillaceae Jiang et al. 2019
Novibacillus Yang et al. 2015
Numidum Tidjani Alou et al. 2016
Paenibacillaceae De Vos et al. 2010
AB234269_g
AB637273_g
AJ576374_g
Ammoniibacillus Sakai et al. 2015
Ammoniphilus Zaitsev et al. 1998
Aneurinibacillus Shida et al. 1996
AYLA_g
Brevibacillus Shida et al. 1996
Chengkuizengella Cao et al. 2017
Cohnella Kämpfer et al. 2006
DQ129551_g
DQ378179_g
EU240395_g
FN563170_g
FN667404_g
FN667486_g
Fontibacillus Saha et al. 2010
Gorillibacterium Keita et al. 2017
GU731276_g
HM036046_g
HQ118395_g
Insulibacter Chhe et al. 2023
JN091911_g
JN091924_g
JQ793575_g
JX505143_g
Longirhabdus Chen et al. 2019
Marinicrinis Guo et al. 2016
Oxalophagus Collins et al. 1994
Paenibacillus Ash et al. 1994
Paludirhabdus Hwang et al. 2018
Saccharibacillus Rivas et al. 2008
Thermobacillus Touzel et al. 2000
Xylanibacillus Kukolya et al. 2018
Planococcaceae Krasil'nikov 1949
Bhargavaea Manorama et al. 2009
Caryophanon Peshkoff 1939
Chryseomicrobium Arora et al. 2011
Chungangia Kim et al. 2012
EU223959_g
Indiicoccus Pal et al. 2019
Kurthia Trevisan 1885
Lysinibacillus Ahmed et al. 2007
Metalysinibacillus Gupta and Patel 2020
Metaplanococcus Gupta and Patel 2020
Metasolibacillus Gupta and Patel 2020
Paenisporosarcina Krishnamurthi et al. 2009
Planococcus Migula 1894
Psychrobacillus Krishnamurthi et al. 2011
Rummeliibacillus Vaishampayan et al. 2009
Savagea Whitehead et al. 2015
Solibacillus Krishnamurthi et al. 2009
Sporosarcina Kluyver and van Niel 1936
Ureibacillus Fortina et al. 2001
Viridibacillus Albert et al. 2007
Sporolactobacillaceae Ludwig et al. 2010
Caenibacillus Tsujimoto et al. 2016
Camelliibacillus Lin et al. 2018
HQ753539_g
Pullulanibacillus Hatayama et al. 2006
Scopulibacillus Lee and Lee 2015
Sporolactobacillus Kitahara and Suzuki 1963
Terrilactibacillus Prasirtsak et al. 2016
Tuberibacillus Hatayama et al. 2006
Staphylococcaceae Schleifer and Bell 2010
Abyssicoccus Jiang et al. 2016
Aliicoccus Amoozegar et al. 2014
Corticicoccus Li et al. 2017
Jeotgalicoccus Yoon et al. 2003
Macrococcus Kloos et al. 1998
Mammaliicoccus Madhaiyan et al. 2020
Nosocomiicoccus Morais et al. 2008
Salinicoccus Ventosa et al. 1990
Staphylococcus Rosenbach 1884
Thermicanus_f
Thermicanus Gößner et al. 2000
Thermoactinomycetaceae Matsuo et al. 2006
AM500747_g
Baia Guan et al. 2015
Desmospora Yassin et al. 2009
DQ448769_g
Geothermomicrobium Zhou et al. 2014
GU477301_g
Hazenella Buss et al. 2013
HM036047_g
JF175530_g
JF237776_g
Kroppenstedtia von Jan et al. 2011
Laceyella Yoon et al. 2005
Lihuaxuella Yu et al. 2013
Marininema Li et al. 2012
Marinithermofilum Zhang et al. 2015
Mechercharimyces Matsuo et al. 2006
Melghirimyces Addou et al. 2012
Paenactinomyces Jiang et al. 2019
Paludifilum Frikha-Dammak et al. 2016
Pasteuria Metchnikoff 1888
Planifilum Hatayama et al. 2005
Polycladomyces Tsubouchi et al. 2013
Risungbinella Kim et al. 2015
Salinithrix Zarparvar et al. 2014
Seinonella Yoon et al. 2005
Shimazuella Park et al. 2007
Staphylospora Wang et al. 2019
Thermoactinomyces Tsilinsky 1899
Thermoflavimicrobium Yoon et al. 2005
Lactobacillales Ludwig et al. 2010
Aerococcaceae Ludwig et al. 2010
Abiotrophia Kawamura et al. 1995
Aerococcus Williams et al. 1953
Atopobacter Lawson et al. 2000
Bavariicoccus Schmidt et al. 2009
Dolosicoccus Collins et al. 1999
DQ113697_g
Eremococcus Collins et al. 1999
Facklamia Collins et al. 1997
Falseniella Fotedar et al. 2021
Fundicoccus Siebert et al. 2020
Globicatella Collins et al. 1995
Granulicatella Collins and Lawson 2000
Hutsoniella Fotedar et al. 2021
Ignavigranum Collins et al. 1999
Ruoffia Fotedar et al. 2021
Suicoccus Li et al. 2019
Vaginisenegalia Lo et al. 2019
Carnobacteriaceae Ludwig et al. 2010
Alkalibacterium Ntougias and Russel 2001
Allofustis Collins et al. 2003
Alloiococcus Aguirre and Collins 1992
AM500757_g
Atopococcus Collins et al. 2005
Atopostipes Cotta et al. 2004
AY581816_g
Carnobacterium Collins et al. 1987
Desemzia Stackebrandt et al. 1999
Dolosigranulum Aguirre et al. 1994
EU289466_g
FJ764780_g
FJ825559_g
Isobaculum Collins et al. 2002
Jeotgalibaca Lee et al. 2014
Lacticigenium Iino et al. 2009
Marinilactibacillus Ishikawa et al. 2003
Pisciglobus Tanasupawat et al. 2011
Trichococcus Scheff et al. 1984
Enterococcaceae Ludwig et al. 2010
Catellicoccus Lawson et al. 2006
DQ345464_g
Enterococcus (ex Thiercelin and Jouhaud 1903) Schleifer and Kilpper-Bälz 1984
EU560817_g
Melissococcus Bailey and Collins 1983
Pilibacter Higashiguchi et al. 2006
Tetragenococcus Collins et al. 1993
Vagococcus Collins et al. 1990
Lactobacillaceae Winslow et al. 1917
AB284946_g
Acetilactobacillus Zheng et al. 2020
Agrilactobacillus Zheng et al. 2020
Amylolactobacillus Zheng et al. 2020
Apilactobacillus Zheng et al. 2020
Bombilactobacillus Zheng et al. 2020
Companilactobacillus Zheng et al. 2020
Convivina Praet et al. 2015
Dellaglioa Zheng et al. 2020
EU469745_g
Fructilactobacillus Zheng et al. 2020
Fructobacillus Endo and Okada 2008
Furfurilactobacillus Zheng et al. 2020
HM215046_g
Holzapfeliella Deshmukh and Oren 2023
JF101989_g
Lacticaseibacillus Zheng et al. 2020
Lactiplantibacillus Zheng et al. 2020
Lactobacillus Beijerinck 1901
Lapidilactobacillus Zheng et al. 2020
Latilactobacillus Zheng et al. 2020
Lentilactobacillus Zheng et al. 2020
Leuconostoc van Tieghem 1878
Levilactobacillus Zheng et al. 2020
Ligilactobacillus Zheng et al. 2020
Limosilactobacillus Zheng et al. 2020
Liquorilactobacillus Zheng et al. 2020
Loigolactobacillus Zheng et al. 2020
Nicoliella Deshmukh and Oren 2023
Oenococcus Dicks et al. 1995
Paralactobacillus Leisner et al. 2000
Paucilactobacillus Zheng et al. 2020
Pediococcus Claussen 1903
Periweissella Bello et al. 2022
Philodulcilactobacillus Kouya et al. 2023
Schleiferilactobacillus Zheng et al. 2020
Secundilactobacillus Zheng et al. 2020
Weissella Collins et al. 1994
Streptococcaceae Deibel and Seeley 1974
Floricoccus Chuah et al. 2017
Lactococcus Schleifer et al. 1986
Lactovum Matthies et al. 2005
Streptococcus Rosenbach 1884
Data type count
  • 0
    Genome
  • 0
    16S rRNA