Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Clostridiales Prevot 1953
Acidaminobacter Stams and Hansen 1985
Acidaminobacter hydrogenoformans Stams and Hansen 1985
Fusibacter Ravot et al. 1999
Fusibacter bizertensis Smii et al. 2015
Fusibacter ferrireducens Qiu et al. 2021
Fusibacter fontis Fadhlaoui et al. 2015
Fusibacter paucivorans Ravot et al. 1999
Fusibacter tunisiensis Ben Hania et al. 2012
Guggenheimella Wyss et al. 2005
Guggenheimella bovis Wyss et al. 2005
Aristaeellaceae Mahoney-Kurpe et al. 2023
Aristaeella Mahoney-Kurpe et al. 2023
Aristaeella hokkaidonensis Mahoney-Kurpe et al. 2023
Aristaeella lactis Mahoney-Kurpe et al. 2023
Bianqueaceae Liu et al. 2021
Bianquea Liu et al. 2021
Bianquea renqiuensis Liu et al. 2021
Caldicoprobacteraceae Yokoyama et al. 2010
Caldicoprobacter Yokoyama et al. 2010
Caldicoprobacter algeriensis Bouanane-Darenfed et al. 2012
Caldicoprobacter faecalis (Winter et al. 1988) Bouanane-Darenfed et al. 2015
Caldicoprobacter guelmensis Bouanane-Darenfed et al. 2013
Caldicoprobacter oshimai Yokoyama et al. 2010
Anaeromicrobium Zhang et al. 2017
Anaeromicrobium sediminis Zhang et al. 2017
Anaerosolibacter Hong et al. 2015
Caminicella Alain et al. 2002
Caminicella sporogenes Alain et al. 2002
Crassaminicella Lakhal et al. 2015
Crassaminicella indica Jiao et al. 2023
Crassaminicella profunda Lakhal et al. 2015
Geosporobacter Klouche et al. 2007
Geosporobacter ferrireducens Hong et al. 2021
Geosporobacter subterraneus Klouche et al. 2007
Inediibacterium Alou et al. 2017
Anaerophilus nitritogenes Zhang et al. 2019
Inediibacterium massiliense Alou et al. 2017
Maledivibacter Li et al. 2016
Maledivibacter halophilus (Fendrich et al. 1991) Li et al. 2016
Marinisporobacter Vandieken et al. 2017
Marinisporobacter balticus Vandieken et al. 2017
Paramaledivibacter Li et al. 2016
Paramaledivibacter caminithermalis (Brisbarre et al. 2003) Li et al. 2016
Salimesophilobacter Zhang et al. 2013
Salimesophilobacter vulgaris Zhang et al. 2013
Thermotalea Ogg and Patel 2009
Thermotalea metallivorans Ogg and Patel 2009
Wukongibacter Li et al. 2016
Wukongibacter baidiensis Li et al. 2016
Christensenellaceae Morotomi et al. 2012
Beduinibacterium Traore et al. 2017
Beduinibacterium massiliense Traore et al. 2017
Christensenella Morotomi et al. 2012
Christensenella hongkongensis (Lau et al. 2014) Liu et al. 2021
Christensenella massiliensis Ndongo et al. 2016
Christensenella minuta Morotomi et al. 2012
Christensenella tenuis Liu et al. 2022
Christensenella timonensis Ndongo et al. 2016
Gehongia Liu et al. 2022
Gehongia tenuis Liu et al. 2022
Guopingia Liu et al. 2022
Guopingia tenuis Liu et al. 2022
Luoshenia Liu et al. 2022
Luoshenia tenuis Liu et al. 2022
Maliibacterium Traore et al. 2023
Maliibacterium massiliense Traore et al. 2023
Clostridiaceae Pribram 1933
Arthromitus Snel et al. 1995
Caloramator Collins et al. 1994
Caloramator australicus Ogg and Patel 2009
Caloramator boliviensis Crespo et al. 2012
Caloramator coolhaasii Plugge et al. 2000
Caloramator fervidus (Patel et al. 1987) Collins et al. 1994
Caloramator indicus Chrisostomos et al. 1996
Caloramator mitchellensis Ogg and Patel 2011
Caloramator proteoclasticus Tarlera et al. 1997
Caloramator quimbayensis Rubiano-Labrador et al. 2013
Caloramator viterbiensis Seyfried et al. 2002
Clostridium cylindrosporum (ex Barker and Beck 1942) Andreesen et al. 1985
Thermobrachium celere Engle et al. 1996
Clostridium Prazmowski 1880
Clostridium acetireducens Örlygsson et al. 1996
Clostridium acetobutylicum McCoy et al. 1926
Clostridium acidisoli Kuhner et al. 2000
Clostridium aciditolerans Lee et al. 2007
Clostridium aestuarii Kim et al. 2007
Clostridium akagii Kuhner et al. 2000
Clostridium algidicarnis Lawson et al. 1995
Clostridium algifaecis Wu et al. 2014
Clostridium algoriphilum Shcherbakova et al. 2010
Clostridium amazonense O'Neal et al. 2015
Clostridium amylolyticum Song and Dong 2008
Clostridium arbusti Jung et al. 2010
Clostridium argentinense Suen et al. 1988
Clostridium aromativorans Luo et al. 2023
Clostridium baratii (Prévot 1938) Holdeman and Moore 1970
Clostridium beihaiense Dong et al. 2018
Clostridium bornimense Hahnke et al. 2014
Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923
Clostridium bovifaecis Zhu et al. 2018
Clostridium bowmanii Spring et al. 2003
Clostridium budayi (Le Blaye and Guggenheim 1914) Bernard et al. 2018
Clostridium butyricum Prazmowski 1880
Clostridium cadaveris (Klein 1899) McClung and McCoy 1957
Clostridium cagae Tall et al. 2020
Clostridium caldaquaticum Lv et al. 2023
Clostridium carboxidivorans Liou et al. 2005
Clostridium carnis (Klein 1904) Spray 1939
Clostridium cavendishii Bowman et al. 2010
Clostridium celatum Hauschild and Holdeman 1974
Clostridium cellulovorans Sleat et al. 1985
Clostridium chartatabidum Kelly et al. 1996
Clostridium chauvoei (Arloing et al. 1887) Scott 1928
Clostridium chromiireducens Inglett et al. 2011
Clostridium chrysemydis Hunter et al. 2021
Clostridium cibarium Gilroy et al. 2021
Clostridium cochlearium (Douglas et al. 1919) Bergey et al. 1923
Clostridium colicanis Greetham et al. 2003
Clostridium collagenovorans Jain and Zeikus 1988
Clostridium combesii (Prévot and Laplanche 1947) Bernard et al. 2018
Clostridium composti Shin et al. 2018
Clostridium culturomicium Kieu et al. 2021
Clostridium drakei Liou et al. 2005
Clostridium estertheticum Collins et al. 1993
Clostridium faecium Gilroy et al. 2021
Clostridium fallax (Weinberg and Seguin 1915) Bergey et al. 1923
Clostridium folliculivorans Tazawa et al. 2023
Clostridium frigidicarnis Broda et al. 1999
Clostridium frigoris Spring et al. 2003
Clostridium fungisolvens Ueki et al. 2021
Clostridium gallinarum Gilroy et al. 2021
Clostridium ganghwense Kim et al. 2006
Clostridium gasigenes Broda et al. 2000
Clostridium gelidum Honma et al. 2022
Clostridium grantii Mountfort et al. 1996
Clostridium guangxiense Zhao et al. 2017
Clostridium haemolyticum (Hall 1929) Scott et al. 1935
Clostridium hominis Liu et al. 2022
Clostridium homopropionicum Dörner and Schink 1991
Clostridium huakuii Ruan et al. 2014
Clostridium hydrogeniformans Bowman et al. 2010
Clostridium intestinale Lee et al. 1989
Clostridium isatidis Padden et al. 1999
Clostridium kluyveri Barker and Taha 1942
Clostridium kogasense Shin et al. 2021
Clostridium lacusfryxellense Spring et al. 2003
Clostridium lentum Liu et al. 2022
Clostridium liquoris Yin et al. 2016
Clostridium ljungdahlii Tanner et al. 1993
Clostridium lundense Cirne et al. 2006
Clostridium luticellarii Wang et al. 2015
Clostridium magnum Schink 1984
Clostridium malenominatum (Weinberg et al. 1937) Spray 1948
Clostridium massiliamazoniense Dione et al. 2020
Clostridium massiliodielmoense Tidjani Alou et al. 2016
Clostridium maximum (Lindner 1888) Lawson and Rainey 2016
Clostridium mediterraneense Ndongo et al. 2017
Clostridium mobile Li et al. 2022
Clostridium moniliforme (Repaci 1910) Lawson and Rainey 2016
Clostridium muellerianum Doyle et al. 2022
Clostridium neonatale Bernard et al. 2018
Clostridium neuense Zhao et al. 2017
Clostridium niameyense Chabou et al. 2018
Clostridium nigeriense Alou et al. 2018
Clostridium nitritogenes (Prévot 1940) Bernard et al. 2018
Clostridium nitrophenolicum Suresh et al. 2007
Clostridium novyi (Migula 1894) Bergey et al. 1923
Clostridium oryzae Horino et al. 2015
Clostridium pabulibutyricum Kobayashi et al. 2017
Clostridium paraputrificum (Bienstock 1906) Snyder 1936
Clostridium paridis Li et al. 2022
Clostridium pascui Wilde et al. 1997
Clostridium pasteurianum Winogradsky 1895
Clostridium peptidivorans Mechichi et al. 2000
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937
Clostridium polyendosporum (Duda et al. 1996) Rainey et al. 2016
Clostridium polynesiense Sankar et al. 2023
Clostridium porci Wylensek et al. 2021
Clostridium prolinivorans Huang et al. 2020
Clostridium psychrophilum Spring et al. 2003
Clostridium punense Lanjekar et al. 2015
Clostridium puniceum Lund et al. 1981
Clostridium putrefaciens (McBryde 1911) Sturges and Drake 1927
Clostridium quinii Svensson et al. 1995
Clostridium rhizosphaerae Li et al. 2022
Clostridium sartagoforme Partansky and Henry 1935
Clostridium saudiense Angelakis et al. 2016
Clostridium scatologenes (Weinberg and Ginsbourg 1927) Prévot 1948
Clostridium schirmacherense Alam et al. 2006
Clostridium senegalense Mishra et al. 2015
Clostridium septicum (Mace 1889) Ford 1927
Clostridium simiarum Li et al. 2022
Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923
Clostridium subterminale (Hall and Whitehead 1927) Spray 1948
Clostridium sulfidigenes Sallam and Steinbüchel 2009
Clostridium swellfunianum Liu et al. 2015
Clostridium taeniosporum Krasil'nikov et al. 1968
Clostridium tagluense Suetin et al. 2009
Clostridium tarantellae (Udey et al. 1977) Lawson and Rainey 2016
Clostridium tepidum Dobritsa et al. 2017
Clostridium tertium (Henry 1917) Bergey et al. 1923
Clostridium tetani (Flügge 1886) Bergey et al. 1923
Clostridium tetanomorphum (ex Bulloch et al. 1919) Wilde et al. 1989
Clostridium thailandense Chaikitkaew et al. 2022
Clostridium thermarum Liu et al. 2021
Clostridium thermobutyricum Wiegel et al. 1989
Clostridium thermopalmarium Soh et al. 1991
Clostridium thiosulfatireducens Hernandez-Eugenio et al. 2002
Clostridium tunisiense Thabet et al. 2004
Clostridium tyrobutyricum van Beynum and Pette 1935
Clostridium uliginosum Matthies et al. 2001
Clostridium ventriculi (Goodsir 1842) Lawson and Rainey 2016
Clostridium vincentii Mountfort et al. 1997
Clostridium vulturis Paek et al. 2015
Clostridium weizhouense Li et al. 2022
Clostridium yunnanense Li et al. 2022
Clostridium zeae Kobayashi et al. 2021
Eubacterium multiforme (Distaso 1911) Holdeman and Moore 1970
Ilyobacter delafieldii Janssen and Harfoot 1991
Clostridium facile Liu et al. 2022
Clostridium methylpentosum Himelbloom and Canale-Parola 1989
Desnuesiella Hadjadj et al. 2016
Desnuesiella massiliensis Hadjadj et al. 2016
Fervidicella Ogg and Patel 2010
Fervidicella metallireducens Ogg and Patel 2010
Fonticella Fraj et al. 2013
Fonticella tunisiensis Fraj et al. 2013
Haloimpatiens Wu et al. 2016
Clostridium tepidiprofundi Slobodkina et al. 2008
Haloimpatiens massiliensis Anani et al. 2020
Hathewaya Lawson and Rainey 2016
Hathewaya histolytica (Weinberg and Séguin 1916) Lawson and Rainey 2016
Hathewaya limosa (André 1948) Lawson and Rainey 2016
Hathewaya massiliensis Tall et al. 2020
Hathewaya proteolytica (Jain and Zeikus 1988) Lawson and Rainey 2016
Inconstantimicrobium Wylensek et al. 2021
Inconstantimicrobium porci Wylensek et al. 2021
Oceanirhabdus Pi et al. 2013
Oxobacter Collins et al. 1994
Oxobacter pfennigii (Krumholz and Bryant 1985) Collins et al. 1994
Proteiniclasticum Zhang et al. 2010
Proteiniclasticum aestuarii Namirimu et al. 2022
Proteiniclasticum ruminis Zhang et al. 2010
Proteiniclasticum sediminis Liu et al. 2021
Youngiibacter Lawson et al. 2014
Youngiibacter fragilis Lawson et al. 2014
Youngiibacter multivorans Lawson et al. 2014
Defluviitaleaceae Jabari et al. 2012
Defluviitalea Jabari et al. 2012
Defluviitalea phaphyphila Ji et al. 2016
Defluviitalea saccharophila Jabari et al. 2012
Dehalobacterium Magli et al. 1996
Desulfallaceae Watanabe et al. 2021
Desulfallas Watanabe et al. 2018
Desulfallas sapomandens (Cord-Ruwisch and Garcia 1990) Watanabe et al. 2018
Desulfallas thermosapovorans (Fardeau et al. 1995) Watanabe et al. 2018
Desulfoscipio Watanabe et al. 2021
Desulfoscipio geothermicus (Daumas et al. 1990) Watanabe et al. 2021
Desulfoscipio gibsoniae (Kuever et al. 1999) Watanabe et al. 2021
Desulfotruncus Watanabe et al. 2021
Desulfotruncus alcoholivorax (Kaksonen et al. 2008) Watanabe et al. 2021
Desulfotruncus arcticus (Vandieken et al. 2006) Watanabe et al. 2021
Sporotomaculum Brauman et al. 1998
Sporotomaculum hydroxybenzoicum Brauman et al. 1998
Sporotomaculum syntrophicum Qiu et al. 2003
Desulfitispora Sorokin and Muyzer 2010
Desulfitispora alkaliphila Sorokin and Muyzer 2010
Desulfitispora elongata Sorokin and Chernyh 2017
Desulfitobacteriaceae Stackebrandt 2020
Acididesulfobacillus Sánchez-Andrea et al. 2023
Acididesulfobacillus acetoxydans Sánchez-Andrea et al. 2023
Dehalobacter Holliger et al. 1998
Dehalobacter restrictus Holliger et al. 1998
Desulfitobacterium Utkin et al. 1994
Desulfitobacterium dichloroeliminans De Wildeman et al. 2003
Desulfitobacterium hafniense Christiansen and Ahring 1996
Desulfitobacterium metallireducens Finneran et al. 2002
Desulfosporosinus Stackebrandt et al. 1997
Desulfosporosinus acididurans Sánchez-Andrea et al. 2015
Desulfosporosinus acidiphilus Alazard et al. 2012
Desulfosporosinus auripigmenti (Newman et al. 2000) Stackebrandt et al. 2003
Desulfosporosinus burensis Mayeux et al. 2013
Desulfosporosinus fructosivorans Vandieken et al. 2017
Desulfosporosinus hippei Vatsurina et al. 2008
Desulfosporosinus lacus Ramamoorthy et al. 2006
Desulfosporosinus meridiei Robertson et al. 2001
Desulfosporosinus metallidurans Panova et al. 2021
Desulfosporosinus nitroreducens Vandieken et al. 2017
Desulfosporosinus orientis (Campbell and Postgate 1965) Stackebrandt et al. 1997
Desulfosporosinus youngiae Lee et al. 2009
Dichloromethanomonas Kleindienst et al. 2017
Dichloromethanomonas elyunquensis Kleindienst et al. 2017
Paradesulfitobacterium Li et al. 2021
Paradesulfitobacterium aromaticivorans (Kunapuli et al. 2010) Li et al. 2021
Syntrophobotulus Friedrich et al. 1996
Syntrophobotulus glycolicus Friedrich et al. 1996
Desulfocucumaceae Watanabe et al. 2021
Desulfocucumis Watanabe et al. 2017
Desulfocucumis palustris Watanabe et al. 2017
Desulfofundulus Watanabe et al. 2018
Desulfofundulus australicus (Love et al. 1993) Watanabe et al. 2018
Desulfofundulus kuznetsovii (Nazina et al. 1990) Watanabe et al. 2018
Desulfofundulus luciae (Liu et al. 1997) Watanabe et al. 2018
Desulfofundulus salinum Grouzdev et al. 2018
Desulfofundulus solfataricus (Goorissen et al. 2003) Watanabe et al. 2018
Desulfofundulus thermoacetoxidans (Min and Zinder 1995) Watanabe et al. 2018
Desulfofundulus thermobenzoicus (Tasaki et al. 1991) Watanabe et al. 2018
Desulfofundulus thermocisternus (Nilsen et al. 1996) Watanabe et al. 2018
Desulfofundulus thermosubterraneus (Kaksonen et al. 2006) Watanabe et al. 2018
Desulfotomaculaceae Stackebrandt 2020
Desulfofalx Watanabe et al. 2021
Desulfofalx alkaliphila (Pikuta et al. 2000) Watanabe et al. 2021
Desulfofarcimen Watanabe et al. 2018
Desulfofarcimen acetoxidans (Widdel and Pfennig 1977) Watanabe et al. 2018
Desulfohalotomaculum Watanabe et al. 2018
Desulfohalotomaculum halophilum (Tardy-Jacquenod et al. 1998) Watanabe et al. 2018
Desulfolucanica Watanabe et al. 2023
Desulfolucanica intricata (Watanabe et al. 2013) Watanabe et al. 2023
Desulforadius Watanabe et al. 2021
Desulforadius tongensis (Cha et al. 2014) Watanabe et al. 2021
Desulforamulus Watanabe et al. 2021
Desulforamulus aeronauticus (Hagenauer et al. 1997) Watanabe et al. 2021
Desulforamulus aquiferis (Berlendis et al. 2016) Watanabe et al. 2021
Desulforamulus ferrireducens (Yang et al. 2016) Watanabe et al. 2021
Desulforamulus hydrothermalis (Haouari et al. 2008) Watanabe et al. 2021
Desulforamulus profundi (Berlendis et al. 2016) Watanabe et al. 2021
Desulforamulus putei (Liu et al. 1997) Watanabe et al. 2021
Desulforamulus reducens (Visser et al. 2016) Watanabe et al. 2021
Desulforamulus ruminis (Campbell and Postgate 1965) Watanabe et al. 2021
Desulfotomaculum defluvii Krishnamurthi et al. 2013
Desulfotomaculum varum Ogg and Patel 2011
Desulfotomaculum Campbell and Postgate 1965
Desulfotomaculum nigrificans (Werkman and Weaver 1927) Campbell and Postgate 1965
Desulfovectis Watanabe et al. 2021
Desulfovectis peckii (Jabari et al. 2013) Watanabe et al. 2021
Desulfurisporaceae Watanabe et al. 2021
Desulfurispora Kaksonen et al. 2007
Desulfurispora thermophila Kaksonen et al. 2007
Eubacteriaceae Ludwig et al. 2010
Acetobacterium Balch et al. 1977
Acetobacterium bakii Kotsyurbenko et al. 1997
Acetobacterium carbinolicum Eichler and Schink 1985
Acetobacterium fimetarium Kotsyurbenko et al. 1997
Acetobacterium malicum Tanaka and Pfennig 1990
Acetobacterium paludosum Kotsyurbenko et al. 1997
Acetobacterium tundrae Simankova et al. 2001
Acetobacterium wieringae Braun and Gottschalk 1983
Acetobacterium woodii Balch et al. 1977
Alkalibacter Garnova et al. 2005
Alkalibacter mobilis Khomyakova et al. 2021
Alkalibacter rhizosphaerae Namirimu et al. 2022
Alkalibacter saccharofermentans Garnova et al. 2005
Alkalibaculum Allen et al. 2010
Alkalibaculum bacchi Allen et al. 2010
Alkalibaculum sporogenes Khomyakova et al. 2020
Anaerofustis Finegold et al. 2004
Anaerofustis stercorihominis Finegold et al. 2004
Eubacterium Prévot 1938
Eubacterium aggregans Mechichi et al. 2000
Eubacterium barkeri (Stadtman et al. 1972) Collins et al. 1994
Eubacterium callanderi Mountfort et al. 1988
Eubacterium limosum (Eggerth 1935) Prévot 1938
Eubacterium maltosivorans Feng et al. 2018
Garciella Miranda-Tello et al. 2003
Garciella nitratireducens Miranda-Tello et al. 2003
Irregularibacter Lagkouvardos et al. 2016
Irregularibacter muris Lagkouvardos et al. 2016
Pseudoramibacter Willems and Collins 1996
Pseudoramibacter alactolyticus (Prévot and Taffanel 1942) Willems and Collins 1996
Pseudoramibacter fermentans Scarborough et al. 2020
Pseudoramibacter porci Wylensek et al. 2021
Rhabdanaerobium Liu et al. 2017
Rhabdanaerobium thermarum Liu et al. 2017
Feifaniaceae Liu et al. 2021
Feifania Liu et al. 2021
Feifania hominis Liu et al. 2021
Gracilibacteraceae Lee et al. 2010
Gracilibacter Lee et al. 2006
Lutispora Shiratori et al. 2008
Lutispora saccharofermentans Huari et al. 2023
Lutispora thermophila Shiratori et al. 2008
Heliobacteriaceae Madigan and Asao 2010
Heliobacterium Gest and Favinger 1985
Heliobacterium chlorum Gest and Favringer 1985
Heliobacterium mobile (Beer-Romero and Guest 1998) Kyndt et al. 2021
Heliomicrobium Kyndt et al. 2021
Heliomicrobium gestii (Ormerod et al. 1996) Kyndt et al. 2021
Heliomicrobium modesticaldum (Kimble et al. 1996) Kyndt et al. 2021
Heliomicrobium sulfidophilum (Bryantseva et al. 2001) Kyndt et al. 2021
Heliomicrobium undosum (Bryantseva et al. 2001) Kyndt et al. 2021
Heliomonas Asao et al. 2012
Heliomonas lunata Asao et al. 2012
Heliophilum Ormerod et al. 1996
Heliophilum fasciatum Ormerod et al. 1996
Heliorestis Bryantseva et al. 2000
Heliorestis acidaminivorans Asao et al. 2021
Heliorestis baculata Bryantseva et al. 2001
Heliorestis convoluta Asao et al. 2021
Heliorestis daurensis Bryantseva et al. 2000
Lachnospiraceae Rainey 2010
Acetatifactor Pfeiffer et al. 2013
Acetatifactor muris Pfeiffer et al. 2013
Acetitomaculum Greening and Leedle 1995
Acetitomaculum ruminis Greening and Leedle 1995
Agathobacter Rosero et al. 2016
Agathobacter rectalis (Hauduroy et al. 1937) Rosero et al. 2016
Agathobacter ruminis Rosero et al. 2016
Anaerobium Patil et al. 2015
Anaerobium acetethylicum Patil et al. 2015
Anaerobutyricum Shetty et al. 2018
Anaerobutyricum hallii (Holdeman and Moore 1974) Shetty et al. 2018
Anaerobutyricum soehngenii Shetty et al. 2018
Anaerocolumna Ueki et al. 2016
Anaerocolumna aminovalerica (Hardman and Stadtman 1960) Ueki et al. 2016
Anaerocolumna chitinilytica Ueki et al. 2021
Anaerocolumna jejuensis (Jeong et al. 2004) Ueki et al. 2016
Anaerocolumna sedimenticola Kim et al. 2022
Anaerocolumna xylanovorans (Mechichi et al. 2000) Ueki et al. 2016
Anaeromicropila Ueki et al. 2023
Anaeromicropila herbilytica Ueki et al. 2023
Anaeropeptidivorans Köller et al. 2022
Anaerosacchariphilus Kim et al. 2019
Anaerosporobacter Jeong et al. 2007
Anaerosporobacter faecicola Choi et al. 2021
Anaerosporobacter mobilis Jeong et al. 2007
Anaerostipes Schwiertz et al. 2002
Anaerostipes butyraticus Eeckhaut et al. 2010
Anaerostipes caccae Schwiertz et al. 2002
Anaerostipes faecalis Choi et al. 2022
Anaerostipes hadrus (Moore et al. 1976) Allen-Vercoe et al. 2013
Anaerostipes hominis Lee et al. 2021
Anaerostipes rhamnosivorans Bui et al. 2014
Anaerotaenia Ueki et al. 2016
Anaerotaenia torta Ueki et al. 2016
Anaerotignum Ueki et al. 2017
Anaerotignum aminivorans Ueki et al. 2017
Anaerotignum faecicola Choi et al. 2020
Anaerotignum lactatifermentans (van der Wielen et al. 2002) Ueki et al. 2017
Anaerotignum neopropionicum (Tholozan et al. 1995) Ueki et al. 2017
Anaerotignum propionicum (Cardon and Barker 1946) Ueki et al. 2017
Bacteroides pectinophilus Jensen and Canale-Parola 1987
Bilifractor Wylensek et al. 2021
Bilifractor porci Wylensek et al. 2021
Blautia Liu et al. 2008
Blautia argi Paek et al. 2019
Blautia caecimuris Lagkouvardos et al. 2016
Blautia celeris Liu et al. 2022
Blautia coccoides (Kaneuchi et al. 1976) Liu et al. 2008
Blautia difficilis Liu et al. 2021
Blautia faecis Park et al. 2013
Blautia glucerasea Furuya et al. 2010
Blautia hansenii (Holdeman and Moore 1974) Liu et al. 2008
Blautia hominis Shin et al. 2018
Blautia hydrogenotrophica (Bernalier et al. 1997) Liu et al. 2008
Blautia intestinalis Wang et al. 2021
Blautia luti (Simmering et al. 2002) Liu et al. 2008
Blautia massiliensis Durand et al. 2017
Blautia obeum (Moore et al. 1976) Lawson and Finegold 2015
Blautia phocaeensis Traore et al. 2017
Blautia producta (Prévot 1941) Liu et al. 2008
Blautia provencensis Pham et al. 2017
Blautia pseudococcoides Maturana and Cárdenas 2022
Blautia schinkii (Rieu-Lesme et al. 1997) Liu et al. 2008
Blautia stercoris Park et al. 2012
Blautia wexlerae Liu et al. 2008
Butyribacter Zou et al. 2021
Butyribacter intestini Zou et al. 2021
Jutongia hominis Liu et al. 2021
Butyrivibrio Bryant and Small 1956
Butyrivibrio fibrisolvens Bryant and Small 1956
Butyrivibrio hungatei Kopecny et al. 2003
Butyrivibrio proteoclasticus (Attwood et al. 1996) Moon et al. 2008
Butyrivibrio crossotus Moore et al. 1976
Caecibacterium Oren et al. 2019
Caecibacterium sporoformans Oren et al. 2019
Catenibacillus Braune and Blaut 2018
Catenibacillus scindens Braune and Blaut 2018
Catonella Moore and Moore 1994
Catonella massiliensis Antezack et al. 2021
Catonella morbi Moore and Moore 1994
Cellulosilyticum Cai and Dong 2010
Cellulosilyticum lentocellum (Murray et al. 1987) Cai and Dong 2010
Cellulosilyticum ruminicola Cai and Dong 2010
Chordicoccus Gaffney et al. 2023
Chordicoccus furentiruminis Gaffney et al. 2023
Clostridium aminophilum Paster et al. 1993
Clostridium vitabionis Shin et al. 2021
Clostridium herbivorans Varel et al. 1995
Clostridium polysaccharolyticum (van Gylswyk 1981) van Gylswyk et al. 1983
Clostridium populeti Sleat and Mah 1985
Clostridium phytofermentans Warnick et al. 2002
Clostridium fimetarium Kotsyurbenko et al. 1997
Clostridium fessum Seo et al. 2021
Clostridium symbiosum (Stevens 1956) Kaneuchi et al. 1976
Clostridium transplantifaecale Yimagou et al. 2019
Clostridium colinum (ex Berkhoff et al. 1974) Berkhoff 1985
Clostridium piliforme (ex Tyzzer 1917) Duncan et al. 1993
Coprococcus Holdeman and Moore 1974
Coprococcus eutactus Holdeman and Moore 1974
Coprococcus hominis Liu et al. 2022
Bariatricus massiliensis Bessis et al. 2016
Clostridium nexile Holdeman and Moore 1974
Coprococcus comes Holdeman and Moore 1974
Cuneatibacter Lagkouvardos et al. 2016
Cuneatibacter caecimuris Lagkouvardos et al. 2016
Diplocloster Chaplin et al. 2022
Diplocloster agilis Chaplin et al. 2022
Diplocloster modestus Chaplin et al. 2022
Dorea Taras et al. 2002
Dorea formicigenerans (Holdeman and Moore 1974) Taras et al. 2002
Dorea hominis Liu et al. 2022
Dorea longicatena Taras et al. 2002
Dorea massiliensis Pfleiderer et al. 2013
Dorea phocaeensis Takakura et al. 2019
Eisenbergiella Amir et al. 2014
Eisenbergiella porci Wylensek et al. 2021
Eisenbergiella tayi Amir et al. 2014
Enterocloster Haas and Blanchard 2020
Enterocloster aldensis (Warren et al. 2007) Haas and Blanchard 2020
Enterocloster asparagiformis (Mohan et al. 2007) Haas and Blanchard 2020
Enterocloster bolteae (Song et al. 2003) Haas and Blanchard 2020
Enterocloster citroniae (Warren et al. 2007) Haas and Blanchard 2020
Enterocloster clostridioformis (Burri and Ankersmit 1906) Haas and Blanchard 2020
Enterocloster lavalensis (Domingo et al. 2009) Haas and Blanchard 2020
Lachnoclostridium edouardi Traore et al. 2017
Lachnoclostridium pacaense Pham et al. 2017
Epulopiscium Montgomery and Poliak 1988
Epulopiscium fishelsoni Montgomery and Poliak 1988
Eubacterium difficile Liu et al. 2021
Eubacterium xylanophilum van Gylswyk and van der Toorn 1985
Eubacterium oxidoreducens Krumholz and Bryant 1986
Eubacterium rangiferina Sundset et al. 2008
Eubacterium ramulus Moore et al. 1976
Eubacterium segne Liu et al. 2021
Eubacterium uniforme van Gylswyk and van der Toorn 1985
Eubacterium ventriosum (Tissier 1908) Prévot 1938
Eubacterium plexicaudatum Wilkins et al. 1974
Extibacter Lagkouvardos et al. 2017
Clostridium hylemonae Kitahara et al. 2000
Extibacter muris Lagkouvardos et al. 2017
Faecalicatena Sakamoto et al. 2017
Faecalicatena absiana Shin et al. 2022
Faecalicatena contorta (Prévot 1947) Sakamoto et al. 2017
Faecalicatena faecalis Oh et al. 2023
Faecalicatena fissicatena (Taylor 1972) Sakamoto et al. 2017
Faecalicatena orotica (Wachsman and Barker 1954) Sakamoto et al. 2017
Faecalimonas Sakamoto et al. 2017
Faecalimonas umbilicata Sakamoto et al. 2017
Falcatimonas Watanabe et al. 2016
Falcatimonas natans Watanabe et al. 2016
Jingyaoa shaoxingensis Liu et al. 2021
Frisingicoccus Lagkouvardos et al. 2016
Coprococcus catus Holdeman and Moore 1974
Frisingicoccus caecimuris Lagkouvardos et al. 2016
Fusicatenibacter Takada et al. 2013
Fusicatenibacter saccharivorans Takada et al. 2013
Fusimonas Kusada et al. 2017
Fusimonas intestini Kusada et al. 2017
Glucerabacter Kawata et al. 2018
Glucerabacter canisensis Kawata et al. 2018
Herbinix Koeck et al. 2015
Herbinix hemicellulosilytica Koeck et al. 2015
Herbinix luporum Koeck et al. 2016
Hespellia Whitehead et al. 2004
Hespellia porcina Whitehead et al. 2004
Hespellia stercorisuis Whitehead et al. 2004
Hominifimenecus Afrizal et al. 2022
Hominifimenecus microfluidus Afrizal et al. 2022
Hominisplanchenecus Afrizal et al. 2022
Hominiventricola Afrizal et al. 2022
Howardella Cook et al. 2007
Howardella ureilytica Cook et al. 2007
Hungatella Kaur et al. 2014
Hungatella effluvii Kaur et al. 2014
Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014
Hungatella hominis Liu et al. 2022
Johnsonella Moore and Moore 1994
Johnsonella ignava Moore and Moore 1994
Jutongia Liu et al. 2022
Jutongia huaianensis Liu et al. 2022
Kineothrix Haas and Blanchard 2017
Kineothrix alysoides Haas and Blanchard 2017
Konateibacter Sarr et al. 2022
Konateibacter massiliensis Sarr et al. 2022
Lachnoanaerobaculum Hedberg et al. 2012
Lachnoanaerobaculum orale Hedberg et al. 2012
Lachnoanaerobaculum saburreum (Prévot 1966) Hedberg et al. 2012
Lachnoanaerobaculum umeaense Hedberg et al. 2012
Lachnobacterium Whitford et al. 2001
Lachnobacterium bovis Whitford et al. 2001
Lachnoclostridium Brahimi et al. 2017
Lachnocurva Holm et al. 2020
Lachnocurva vaginae Holm et al. 2020
Lachnospira Bryant and Small 1956
Bacteroides galacturonicus Jensen and Canale-Parola 1987
Lachnospira eligens (Holdeman and Moore 1974) García-López et al. 2020
Lachnospira hominis Liu et al. 2021
Lachnospira multipara Bryant and Small 1956
Lachnospira pectinoschiza Cornick et al. 1994
Lachnotalea Jarzembowska et al. 2016
Lachnotalea glycerini Jarzembowska et al. 2016
Lacrimispora Haas and Blanchard 2020
Clostridium geopurificans Kwon et al. 2014
Clostridium indicum Gundawar et al. 2019
Hungatella xylanolytica (Scholten-Koerselman et al. 1988) García-López et al. 2020
Lacrimispora aerotolerans (van Gylswyk and van der Toorn 1987) Haas and Blanchard 2020
Lacrimispora algidixylanolytica (Broda et al. 2000) Haas and Blanchard 2020
Lacrimispora amygdalina (Parshina et al. 2003) Haas and Blanchard 2020
Lacrimispora celerecrescens (Palop et al. 1989) Haas and Blanchard 2020
Lacrimispora defluvii Urvashi et al. 2022
Lacrimispora indolis (McClung and McCoy 1957) Haas and Blanchard 2020
Lacrimispora saccharolytica (Murray et al. 1982) Haas and Blanchard 2020
Lacrimispora sphenoides (Douglas et al. 1919) Haas and Blanchard 2020
Lacrimispora xylanolytica (Rogers and Baecker 1991) Haas and Blanchard 2020
Lactonifactor Clavel et al. 2007
Lactonifactor longoviformis Clavel et al. 2007
Ruminococcus gauvreauii Domingo et al. 2008
Lientehia Abdugheni et al. 2023
Lientehia hominis Abdugheni et al. 2023
Qiania dongpingensis Liu et al. 2021
Luxibacter Naud et al. 2021
Luxibacter massiliensis Naud et al. 2021
Marvinbryantia Wolin et al. 2008
Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008
Massilistercora Tall et al. 2020
Massilistercora timonensis Tall et al. 2020
Mediterraneibacter Togo et al. 2019
Mediterraneibacter faecis (Kim et al. 2011) Togo et al. 2019
Mediterraneibacter glycyrrhizinilyticus (Sakuma et al. 2006) Togo et al. 2019
Mediterraneibacter hominis Liu et al. 2022
Ruminococcus gnavus Moore et al. 1976
Ruminococcus hominis Liu et al. 2021
Ruminococcus lactaris Moore et al. 1976
Ruminococcus torques Holdeman and Moore 1974
Merdimonas Seo et al. 2017
Merdimonas faecis Seo et al. 2017
Mobilisporobacter Mbengue et al. 2016
Mobilisporobacter senegalensis Mbengue et al. 2016
Mobilitalea Podosokorskaya et al. 2014
Mobilitalea sibirica Podosokorskaya et al. 2014
Mordavella Ndongo et al. 2017
Mordavella massiliensis Ndongo et al. 2017
Moryella Carlier et al. 2007
Fusobacterium naviforme (Jungano 1909) Moore and Holdeman 1970
Moryella indoligenes Carlier et al. 2007
Stomatobaculum longum Sizova et al. 2013
Muricomes Lagkouvardos et al. 2016
Muricomes intestini Lagkouvardos et al. 2016
Murimonas Kläring et al. 2015
Murimonas intestini Kläring et al. 2015
Novisyntrophococcus Chai et al. 2021
Blautia liquoris Lu et al. 2021
Ohessyouella Vera-Ponce de Leon et al. 2022
Ohessyouella blattaphilus Vera-Ponce de Leon et al. 2022
Oliverpabstia Wylensek et al. 2021
Blautia faecicola Kim et al. 2020
Oliverpabstia intestinalis Wylensek et al. 2021
Oribacterium Carlier et al. 2004
Oribacterium asaccharolyticum Sizova et al. 2014
Oribacterium parvum Sizova et al. 2014
Oribacterium sinus Carlier et al. 2004
Fusicatenibacter faecihominis Afrizal et al. 2022
Pararoseburia Abdugheni et al. 2022
Roseburia lenta Liu et al. 2022
Parasporobacterium Lomans et al. 2004
Parasporobacterium paucivorans Lomans et al. 2004
Porcincola Wylensek et al. 2021
Porcincola intestinalis Wylensek et al. 2021
Pseudobutyrivibrio van Gylswyk et al. 1996
Pseudobutyrivibrio ruminis van Gylswyk et al. 1996
Pseudobutyrivibrio xylanivorans Kopecny et al. 2003
Robinsoniella Cotta et al. 2009
Robinsoniella peoriensis Cotta et al. 2009
Roseburia Stanton and Savage 1983
Roseburia cecicola Stanton and Savage 1983
Roseburia difficilis Liu et al. 2022
Roseburia faecis Duncan et al. 2006
Roseburia hominis Duncan et al. 2006
Roseburia intestinalis Duncan et al. 2002
Roseburia inulinivorans Duncan et al. 2006
Roseburia porci Wylensek et al. 2021
Roseburia rectibacter Liu et al. 2021
Roseburia zhanii Liu et al. 2022
Schaedlerella Soh et al. 2019
Sellimonas Seo et al. 2016
Lachnoclostridium phocaeense Brahimi et al. 2017
Sellimonas caecigallum Wongkuna et al. 2020
Sellimonas intestinalis Seo et al. 2016
Sellimonas monacensis Zenner et al. 2021
Shuttleworthia Downes et al. 2002
Shuttleworthia satelles Downes et al. 2002
Sporobacterium Mechichi et al. 1999
Sporobacterium olearium Mechichi et al. 1999
Sporofaciens Rasmussen et al. 2021
Clostridium scindens Morris et al. 1985
Sporofaciens musculi Rasmussen et al. 2021
Suipraeoptans Wylensek et al. 2021
Suipraeoptans intestinalis Wylensek et al. 2021
Syntrophococcus Krumholz and Bryant 1986
Eubacterium cellulosolvens (Bryant et al. 1958) Holdeman and Moore 1972
Syntrophococcus sucromutans Krumholz and Bryant 1986
Variimorphobacter Rettenmaier et al. 2021
Variimorphobacter saccharofermentans Rettenmaier et al. 2021
Velocimicrobium Wylensek et al. 2021
Acetivibrio ethanolgignens Robinson and Ritchie 1981
Velocimicrobium porci Wylensek et al. 2021
Waltera Wylensek et al. 2021
Waltera intestinalis Wylensek et al. 2021
Wansuia Liu et al. 2021
Wansuia hejianensis Liu et al. 2021
Weimeria Scarborough et al. 2020
Weimeria bifida Scarborough et al. 2020
Wujia Liu et al. 2021
Wujia chipingensis Liu et al. 2021
Zhenhengia Liu et al. 2022
Niameybacter massiliensis Tidjani Alou et al. 2017
Zhenhengia yiwuensis Liu et al. 2022
Alterileibacterium Boxberger et al. 2019
Alterileibacterium massiliense (Maihe et al. 2017) Boxberger et al. 2019
Aminicella Ueki et al. 2015
Aminicella lysinilytica Ueki et al. 2015
Eubacterium minutum Poco et al. 1996
Eubacterium nodatum Holdeman et al. 1980
Eubacterium pyruvativorans Wallace et al. 2003
Aminipila Ueki et al. 2018
Aminipila butyrica Ueki et al. 2018
Aminipila luticellarii Wei et al. 2021
Aminipila terrae Kim et al. 2022
Anaerovorax Matthies et al. 2000
Anaerovorax odorimutans Matthies et al. 2000
Clostridium aminobutyricum Hardman and Stadtman 1960
Bacilliculturomica Traore et al. 2017
Bacilliculturomica massiliensis Traore et al. 2017
Baileyella Wylensek et al. 2021
Baileyella intestinalis Wylensek et al. 2021
Mobilibacterium timonense Bilen et al. 2017
Emergencia Bessis et al. 2016
Emergencia timonensis Bessis et al. 2016
Eubacterium infirmum Cheeseman et al. 1996
Eubacterium sulci (Cato et al. 1985) Jalava and Eerola 1999
Eubacterium brachy Holdeman et al. 1980
Eubacterium saphenum Uematsu et al. 1993
Gallibacter Zenner et al. 2021
Gallibacter intestinalis Zenner et al. 2021
Hominibacterium Borhanudin et al. 2023
Hominibacterium faecale Borhanudin et al. 2023
Hornefia Wylensek et al. 2021
Hornefia butyriciproducens Wylensek et al. 2021
Hornefia porci Wylensek et al. 2021
Ihubacter Ndongo et al. 2016
Ihubacter massiliensis Ndongo et al. 2016
Lentihominibacter Liu et al. 2022
Lentihominibacter faecis Liu et al. 2021
Lentihominibacter hominis Liu et al. 2022
Mogibacterium Nakazawa et al. 2000
Mogibacterium diversum Nakazawa et al. 2002
Mogibacterium kristiansenii Wylensek et al. 2021
Mogibacterium neglectum Nakazawa et al. 2002
Mogibacterium pumilum Nakazawa et al. 2000
Mogibacterium timidum (Holdeman et al. 1980) Nakazawa et al. 2000
Mogibacterium vescum Nakazawa et al. 2000
Sinanaerobacter Bao et al. 2021
Zhenpiania Liu et al. 2021
Zhenpiania hominis Liu et al. 2021
Alkaliphilus Takai et al. 2001
Alkaliphilus flagellatus Li et al. 2022
Alkaliphilus halophilus Wu et al. 2010
Alkaliphilus hydrothermalis Ben Aissa et al. 2017
Alkaliphilus namsaraevii Zakharyuk et al. 2017
Alkaliphilus oremlandii Fisher et al. 2009
Alkaliphilus peptidifermentans Zhilina et al. 2009
Alkaliphilus pronyensis Postec et al. 2022
Alkaliphilus serpentinus Postec et al. 2022
Alkaliphilus transvaalensis Takai et al. 2001
Anoxynatronum Garnova et al. 2003
Anoxynatronum buryatiense Ryzhmanova et al. 2017
Anoxynatronum sibiricum Garnova and Zhilina 2003
Isachenkonia Zavarzina et al. 2020
Isachenkonia alkalipeptolytica Zavarzina et al. 2020
Natronincola Zhilina et al. 1999
Anaerovirgula multivorans Pikuta et al. 2006
Clostridium aceticum (ex Wieringa 1940) Gottschalk and Braun 1981
Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939
Clostridium formicaceticum Andreesen et al. 1970
Natronincola ferrireducens Zavarzina et al. 2009
Natronincola histidinovorans Zhilina et al. 1999
Natronincola peptidivorans Zhilina et al. 2009
Serpentinicella Mei et al. 2016
Serpentinicella alkaliphila Mei et al. 2016
Tindallia Kevbrin et al. 1999
Tindallia californiensis Pikuta et al. 2003
Tindallia magadiensis Kevbrin et al. 1999
Tindallia texcoconensis Alazard et al. 2009
Oscillospiraceae Peshkoff 1940
Acetanaerobacterium Chen and Dong 2004
Acetanaerobacterium elongatum Chen and Dong 2004
Acetivibrio Patel et al. 1980
Acetivibrio aldrichii (Yang et al. 1990) Tindall 2019
Acetivibrio alkalicellulosi (Zhilina et al. 2006) Tindall 2019
Acetivibrio cellulolyticus Patel et al. 1980
Acetivibrio clariflavus (Shiratori et al. 2009) Tindall 2019
Acetivibrio mesophilus (Rettenmaier et al. 2019) Tindall 2019
Acetivibrio saccincola (Koeck et al. 2016) Tindall 2019
Acetivibrio straminisolvens (Kato et al. 2004) Tindall 2019
Acetivibrio thermocellus (Viljoen et al. 1926) Tindall 2019
Acutalibacter Lagkouvardos et al. 2016
Acutalibacter muris Lagkouvardos et al. 2016
Agathobaculum Ahn et al. 2016
Agathobaculum desmolans (Morris et al. 1986) Ahn et al. 2016
Agathobaculum faecis Liu et al. 2022
Agathobaculum hominis Liu et al. 2021
Butyricicoccus faecihominis Takada et al. 2016
Anaerobacterium Horino et al. 2014
Anaerobacterium chartisolvens Horino et al. 2014
Anaerofilum Zellner et al. 1996
Anaerofilum agile Zellner et al. 1996
Anaerofilum hominis Liu et al. 2022
Anaerofilum pentosovorans Zellner et al. 1996
Anaeromassilibacillus Guilhot et al. 2017
Anaerotruncus Lawson et al. 2004
Anaerotruncus colihominis Lawson et al. 2004
Anaerotruncus massiliensis Togo et al. 2019
Anaerotruncus rubiinfantis Pham et al. 2017
Angelakisella Mailhe et al. 2017
Angelakisella massiliensis Mailhe et al. 2017
Bittarella Durand et al. 2017
Bittarella massiliensis Durand et al. 2017
Butyricicoccus Eeckhaut et al. 2008
Butyricicoccus pullicaecorum Eeckhaut et al. 2008
Caproicibacter Flaiz et al. 2020
Caproicibacter fermentans Flaiz et al. 2020
Caproicibacterium Gu et al. 2021
Caproiciproducens Kim et al. 2015
Caproiciproducens faecalis Choi et al. 2023
Clostridium jeddahense Lagier et al. 2016
Clostridium leptum Moore et al. 1976
Clostridium merdae Ndongo et al. 2017
Clostridium minihomine Bilen et al. 2018
Clostridium sporosphaeroides Soriano and Soriano 1948
Cellulosibacter Watthanalamloet et al. 2012
Cellulosibacter alkalithermophilus Watthanalamloet et al. 2012
Colidextribacter Ricaboni et al. 2017
Colidextribacter massiliensis Ricaboni et al. 2017
Congzhengia Liu et al. 2021
Congzhengia minquanensis Liu et al. 2021
Dysosmobacter Le Roy et al. 2020
Dysosmobacter acutus Li et al. 2022
Dysosmobacter welbionis Le Roy et al. 2020
Ercella van Gelder et al. 2014
Ercella succinigenes van Gelder et al. 2014
Ethanoligenens Xing et al. 2006
Clostridium cellulosi He et al. 1991
Ethanoligenens harbinense Xing et al. 2006
Eubacterium coprostanoligenes Freier et al. 1994
Eubacterium siraeum Moore et al. 1976
Evtepia Strandwitz et al. 2016
Evtepia gabavorous Strandwitz et al. 2016
Faecalibacterium Duncan et al. 2002
Faecalibacterium duncaniae Sakamoto et al. 2022
Faecalibacterium gallinarum Sakamoto et al. 2022
Faecalibacterium hattorii Sakamoto et al. 2022
Faecalibacterium longum Zou et al. 2021
Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002
Fastidiosipila Falsen et al. 2005
Fastidiosipila sanguinis Falsen et al. 2005
Flintibacter Lagkouvardos et al. 2016
Flintibacter butyricus Lagkouvardos et al. 2016
Flintibacter faecis Liu et al. 2021
Fournierella Togo et al. 2017
Fournierella massiliensis Togo et al. 2017
Fumia Liu et al. 2022
Fumia xinanensis Liu et al. 2022
Gemmiger Gossling and Moore 1975
Gemmiger formicilis Gossling and Moore 1975
Gemmiger gallinarum Zenner et al. 2021
Subdoligranulum variabile Holmström et al. 2004
Gorbachella Durand et al. 2017
Gorbachella massiliensis Durand et al. 2017
Harryflintia Petzoldt et al. 2016
Harryflintia acetispora Petzoldt et al. 2016
Hominenteromicrobium Afrizal et al. 2022
Hominenteromicrobium mulieris Afrizal et al. 2022
Hominicoprocola Afrizal et al. 2022
Hominilimicola Afrizal et al. 2022
Hominimerdicola Hitch et al. 2022
Hominimerdicola aceti Hitch et al. 2022
Hydrogeniiclostidium Chaplin et al. 2020
Hydrogenoanaerobacterium Song and Dong 2009
Intestinibacillus Ricaboni et al. 2017
Intestinibacillus massiliensis Ricaboni et al. 2017
Lawsonibacter Sakamoto et al. 2018
Lawsonibacter asaccharolyticus Sakamoto et al. 2018
Lawsonibacter celer Liu et al. 2022
Lawsonibacter faecis Liu et al. 2022
Lawsonibacter hominis Liu et al. 2022
Ligaoa Liu et al. 2022
Ligaoa zhengdingensis Liu et al. 2022
Mageeibacillus Austin et al. 2016
Mageeibacillus indolicus Austin et al. 2016
Marasmitruncus Bellali et al. 2022
Marasmitruncus massiliensis Bellali et al. 2022
Marseillibacter Ndongo et al. 2017
Dysosmobacter segnis Liu et al. 2021
Marseillibacter massiliensis Ndongo et al. 2017
Massiliimalia Afouda et al. 2019
Massiliimalia massiliensis Afouda et al. 2019
Massiliimalia timonensis Afouda et al. 2019
Merdimmobilis Abdugheni et al. 2023
Merdimmobilis hominis Abdugheni et al. 2023
Monoglobus Kim et al. 2017
Monoglobus pectinilyticus Kim et al. 2017
Negativibacillus Ricaboni et al. 2021
Negativibacillus massiliensis Ricaboni et al. 2021
Neglecta Bessis et al. 2016
Neglecta timonensis Bessis et al. 2016
Neobitarella Bilen et al. 2018
Neobitarella massiliensis Bilen et al. 2018
Butyricicoccus porcorum Trachsel et al. 2018
Oscillibacter Iino et al. 2007
Oscillibacter hominis Liu et al. 2022
Oscillibacter ruminantium Lee et al. 2013
Oscillibacter valericigenes Iino et al. 2007
Oscillospira Chatton and Perard 1913
Oscillospira guilliermondii Chatton and Perard 1913
Paludihabitans Deshmukh and Oren 2023
Paludihabitans psychrotolerans (Li et al. 2017) Deshmukh and Oren 2023
Papillibacter Defnoun et al. 2000
Papillibacter cinnamivorans Defnoun et al. 2000
Petroclostridium Zhang et al. 2018
Petroclostridium xylanilyticum Zhang et al. 2018
Pseudobacteroides Horino et al. 2014
Pseudobacteroides cellulosolvens (Murray et al. 1984) Horino et al. 2014
Pseudoclostridium Zhang et al. 2018
Pseudoclostridium thermosuccinogenes (Drent et al. 1995) Zhang et al. 2018
Pseudoflavonifractor Carlier et al. 2010
Clostridium viride Buckel et al. 1995
Flavonifractor plautii (Séguin 1928) Carlier et al. 2010
Intestinimonas butyriciproducens Kläring et al. 2013
Intestinimonas massiliensis Durand et al. 2020
Intestinimonas timonensis Durand et al. 2017
Pseudoflavonifractor capillosus (Tissier 1908) Carlier et al. 2010
Pseudoflavonifractor gallinarum Zenner et al. 2021
Pseudoflavonifractor phocaeensis Ricaboni et al. 2017
Pseudoruminococcus Afouda et al. 2020
Pseudoruminococcus massiliensis Afouda et al. 2020
Pusillibacter Kitahara et al. 2022
Pusillibacter faecalis Kitahara et al. 2022
Pygmaiobacter Bilen et al. 2017
Pygmaiobacter massiliensis Bilen et al. 2017
Qingrenia Liu et al. 2021
Qingrenia yutianensis Liu et al. 2021
Ructibacterium Zenner et al. 2021
Ructibacterium gallinarum Zenner et al. 2021
Ruminiclostridium Zhang et al. 2018
Ruminiclostridium cellobioparum (Hungate 1944) Zhang et al. 2018
Ruminiclostridium cellulolyticum (Petitdemange et al. 1984) Zhang et al. 2018
Ruminiclostridium herbifermentans Rettenmaier et al. 2021
Ruminiclostridium hungatei (Monserrate et al. 2001) Zhang et al. 2018
Ruminiclostridium josui (Sukhumavasi et al. 1988) Zhang et al. 2018
Ruminiclostridium papyrosolvens (Madden et al. 1982) Zhang et al. 2018
Ruminiclostridium sufflavum (Nishiyama et al. 2009) Zhang et al. 2018
Ruminococcoides Molinero et al. 2021
Ruminococcoides bili Molinero et al. 2021
Ruminococcus Sijpesteijn 1948
Ruminococcus albus Hungate 1957
Ruminococcus callidus Holdeman and Moore 1974
Ruminococcus champanellensis Chassard et al. 2012
Ruminococcus flavefaciens Sijpesteijn 1948
Ruminococcus bovis Gaffney et al. 2021
Ruminococcus bromii Moore et al. 1972
Ruthenibacterium Shkoporov et al. 2016
Ruthenibacterium lactatiformans Shkoporov et al. 2016
Saccharofermentans Chen et al. 2010
Scatolibacter Zgheib et al. 2021
Scatolibacter rhodanostii Zgheib et al. 2021
Solibaculum Sakamoto et al. 2021
Solibaculum mannosilyticum Sakamoto et al. 2021
Sporobacter Grech-Mora et al. 1996
Sporobacter termitidis Grech-Mora et al. 1996
Tepidibaculum Slobodkina et al. 2019
Tepidibaculum saccharolyticum Slobodkina et al. 2019
Thermocaproicibacter Nguyen et al. 2023
Thermocaproicibacter melissae Nguyen et al. 2023
Thermoclostridium Zhang et al. 2018
Thermoclostridium caenicola (Shiratori et al. 2009) Zhang et al. 2018
Thermoclostridium stercorarium (Madden 1983) Zhang et al. 2018
Vescimonas Kitahara et al. 2021
Vescimonas coprocola Kitahara et al. 2021
Vescimonas fastidiosa Kitahara et al. 2021
Youxingia Liu et al. 2022
Youxingia wuxianensis Liu et al. 2022
Zongyangia Liu et al. 2022
Zongyangia hominis Liu et al. 2022
Cryptanaerobacter Juteau et al. 2005
Cryptanaerobacter phenolicus Juteau et al. 2005
Pelotomaculum Imachi et al. 2002
Pelotomaculum propionicicum Imachi et al. 2007
Pelotomaculum schinkii de Bok et al. 2005
Pelotomaculum thermopropionicum Imachi et al. 2002
Peptococcaceae Rogosa 1971
Desulfonispora Denger et al. 1999
Desulfonispora thiosulfatigenes Denger et al. 1999
Peptococcus Kluyver and van Niel 1936
Peptococcus niger (Hall 1930) Kluyver and van Niel 1936
Peptococcus simiae Shkoporov et al. 2016
Acetoanaerobium Sleat et al. 1985
Acetoanaerobium noterae Sleat et al. 1985
Acetoanaerobium pronyense Bes et al. 2015
Acetoanaerobium sticklandii (Stadtman and McClung 1957) Galperin et al. 2016
Asaccharospora Gerritsen et al. 2014
Asaccharospora irregularis (Choukevitch 1911) Gerritsen et al. 2014
Clostridioides Lawson et al. 2016
Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016
Clostridioides mangenotii (McClung and McCoy 1957) Lawson et al. 2016
Clostridium paradoxum Li et al. 1993
Criibacterium Maheux et al. 2021
Criibacterium bergeronii Maheux et al. 2021
Filifactor Collins et al. 1994
Filifactor alocis (Cato et al. 1985) Jalava and Eerola 1999
Filifactor villosus (Love et al. 1979) Collins et al. 1994
Intestinibacter Gerritsen et al. 2014
Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014
Paeniclostridium Sasi Jyothsna et al. 2016
Eubacterium tenue (Bergey et al. 1923) Holdeman and Moore 1970
Paeniclostridium ghonii (Prévot 1938) Sasi Jyothsna et al. 2016
Paeniclostridium hominis Liu et al. 2021
Paraclostridium Sasi Jyothsna et al. 2016
Paeniclostridium sordellii (Hall and Scott 1927) Sasi Jyothsna et al. 2016
Paraclostridium benzoelyticum Sasi Jyothsna et al. 2016
Paraclostridium bifermentans (Weinberg and Séguin 1918) Sasi Jyothsna et al. 2016
Paraclostridium dentum Urvashi et al. 2020
Peptacetobacter Chen et al. 2020
Peptacetobacter hiranonis (Kitahara et al. 2001) Chen et al. 2020
Peptacetobacter hominis Chen et al. 2020
Peptoanaerobacter Sizova et al. 2016
Eubacterium yurii Margaret and Krywolap 1986
Peptoanaerobacter stomatis Sizova et al. 2016
Peptoclostridium Galperin et al. 2016
Peptoclostridium acidaminophilum (Zindel et al. 1989) Galperin et al. 2016
Peptoclostridium litorale (Fendrich et al. 1991) Galperin et al. 2016
Peptostreptococcus Kluyver and van Niel 1936
Peptostreptococcus anaerobius (Natvig 1905) Kluyver and van Niel 1936
Peptostreptococcus canis Lawson et al. 2013
Peptostreptococcus faecalis Mekhalif et al. 2023
Peptostreptococcus porci Wylensek et al. 2021
Peptostreptococcus russellii Whitehead et al. 2011
Peptostreptococcus stomatis Downes and Wade 2006
Proteocatella Pikuta et al. 2009
Proteocatella sphenisci Pikuta et al. 2009
Romboutsia Gerritsen et al. 2014
Clostridium dakarense Lo et al. 2014
Romboutsia faecis Liu et al. 2022
Romboutsia hominis Gerritsen et al. 2018
Romboutsia ilealis Gerritsen et al. 2014
Romboutsia lituseburensis (Laplanche and Saissac 1948) Gerritsen et al. 2014
Romboutsia maritimum Maheux et al. 2017
Romboutsia sedimentorum Wang et al. 2015
Romboutsia timonensis Ricaboni et al. 2016
Romboutsia weinsteinii Maheux et al. 2017
Sporacetigenium Chen et al. 2006
Sporacetigenium mesophilum Chen et al. 2006
Tepidibacter Slobodkin et al. 2003
Tepidibacter formicigenes Urios et al. 2004
Tepidibacter mesophilus Tan et al. 2012
Tepidibacter thalassicus Slobodkin et al. 2003
Terrisporobacter Gerritsen et al. 2014
Terrisporobacter glycolicus (Gaston and Stadtman 1963) Gerritsen et al. 2014
Terrisporobacter hibernicus Mitchell et al. 2023
Terrisporobacter mayombei (Kane et al. 1992) Gerritsen et al. 2014
Terrisporobacter othiniensis Lund et al. 2015
Proteiniborus Niu et al. 2008
Proteiniborus ethanoligenes Niu et al. 2008
Proteiniborus indolifex Hahnke et al. 2018
Proteinivoraceae Kevbrin et al. 2014
Alkalicella Quéméneur et al. 2021
Alkalicella caledoniensis Quéméneur et al. 2021
Anaerobranca Engle et al. 1995
Anaerobranca californiensis Gorlenko et al. 2004
Anaerobranca gottschalkii Prowe and Antranikian 2001
Anaerobranca horikoshii Engle et al. 1995
Anaerobranca zavarzinii Kevbrin et al. 2008
Proteinivorax Kevbrin et al. 2014
Proteinivorax hydrogeniformans Boltyanskaya et al. 2018
Proteinivorax tanatarense Kevbrin et al. 2014
Syntrophomonadaceae Zhao et al. 1993
Pelospora Matthies et al. 2000
Pelospora glutarica Matthies et al. 2000
Syntrophomonas McInerney et al. 1982
Syntrophomonas bryantii (Stieb and Schink 1985) Wu et al. 2006
Syntrophomonas cellicola Wu et al. 2006
Syntrophomonas curvata Zhang et al. 2004
Syntrophomonas erecta Zhang et al. 2005
Syntrophomonas palmitatica Hatamoto et al. 2007
Syntrophomonas sapovorans Roy et al. 1987
Syntrophomonas wolfei McInerney et al. 1982
Syntrophomonas zehnderi Sousa et al. 2007
Syntrophothermus Sekiguchi et al. 2000
Syntrophothermus lipocalidus Sekiguchi et al. 2000
Thermosyntropha Svetlitshnyi et al. 1996
Thermosyntropha lipolytica Svetlitshnyi et al. 1996
Thermosyntropha tengcongensis Zhang et al. 2012
Thermincolaceae Stackebrandt 2020
Phosphitispora Mao et al. 2021
Phosphitispora fastidiosa Mao et al. 2021
Thermincola Sokolova et al. 2005
Thermincola carboxydiphila Sokolova et al. 2005
Thermincola ferriacetica Zavarzina et al. 2007
Thermoanaerosceptrum Hamilton-Brehm et al. 2021
Thermoanaerosceptrum fracticalcis Hamilton-Brehm et al. 2021
Thermohalobacteraceae Spring 2021
Abyssisolibacter Kim et al. 2016
Abyssisolibacter fermentans Kim et al. 2016
Anaeromonas Zhang et al. 2022
Anaeromonas frigoriresistens Zhang et al. 2022
Anaeromonas gelatinilytica Zhang et al. 2022
Senegalia massiliensis Traore et al. 2016
Brassicibacter Fang et al. 2012
Brassicibacter mesophilus Fang et al. 2012
Brassicibacter thermophilus Wang et al. 2015
Caldisalinibacter Ben Hania et al. 2015
Caldisalinibacter kiritimatiensis Ben Hania et al. 2015
Caloranaerobacter Wery et al. 2001
Caloranaerobacter azorensis Wery et al. 2001
Clostridiisalibacter Liebgott et al. 2008
Clostridiisalibacter paucivorans Liebgott et al. 2008
Sporosalibacterium Rezgui et al. 2011
Sporosalibacterium faouarense Rezgui et al. 2011
Sporosalibacterium tautonense Podosokorskaya et al. 2017
Thermohalobacter Cayol et al. 2000
Thermohalobacter berrensis Cayol et al. 2000
Vallitaleaceae Quéméneur et al. 2019
Anaerotalea Frolova et al. 2021
Anaerotalea alkaliphila Frolova et al. 2021
Natranaerovirga Sorokin et al. 2012
Natranaerovirga hydrolytica Sorokin et al. 2012
Natranaerovirga pectinivora Sorokin et al. 2012
Petrocella Quéméneur et al. 2019
Petrocella atlantisensis Quéméneur et al. 2019
Vallitalea Lakhal et al. 2013
Vallitalea guaymasensis Lakhal et al. 2013
Vallitalea longa Hirano et al. 2023
Vallitalea okinawensis Sun et al. 2019
Vallitalea pronyensis Ben Aissa et al. 2014
Xylanivirgaceae Liu et al. 2020
Xylanivirga Liu et al. 2020
Xylanivirga thermophila Liu et al. 2020
Yeguiaceae Liu et al. 2021
Yeguia Liu et al. 2021
Yeguia hominis Liu et al. 2021
Data type count
  • 0
    Genome
  • 0
    16S rRNA