Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Actinobacteria;Actinomycetia;Micromonosporales
Micromonosporaceae Krasil'nikov 1938
Actinoplanes Couch 1950
Actinoplanes abujensis Sazak et al. 2012
Actinoplanes aksuensis Ding et al. 2023
Actinoplanes atraurantiacus Zhang et al. 2012
Actinoplanes auranticolor (Couch 1963) Stackebrandt and Kroppenstedt 1988
Actinoplanes aureus Song et al. 2021
Actinoplanes bogorensis Nurkanto et al. 2016
Actinoplanes brasiliensis Thiemann et al. 1969
Actinoplanes campanulatus (Couch 1963) Stackebrandt and Kroppenstedt 1988
Actinoplanes capillaceus Matsumoto et al. 2001
Actinoplanes cibodasensis Nurkanto et al. 2015
Actinoplanes consettensis Goodfellow et al. 1990
Actinoplanes couchii Kämpfer et al. 2007
Actinoplanes cyaneus Terekhova et al. 1987
Actinoplanes deccanensis Parenti et al. 1975
Actinoplanes derwentensis Goodfellow et al. 1990
Actinoplanes deserti Habib et al. 2019
Actinoplanes digitatis (Couch 1963) Stackebrandt and Kroppenstedt 1988
Actinoplanes durhamensis Goodfellow et al. 1990
Actinoplanes ferrugineus Palleroni 1979
Actinoplanes flavus Luo et al. 2021
Actinoplanes friuliensis Aretz et al. 2001
Actinoplanes globisporus (Thiemann 1967) Stackebrandt and Kroppenstedt 1988
Actinoplanes hotanensis Ding et al. 2023
Actinoplanes hulinensis Shen et al. 2012
Actinoplanes humidus Goodfellow et al. 1990
Actinoplanes ianthinogenes (ex Coronelli et al. 1974) Tamura et al. 2011
Actinoplanes italicus Beretta 1973
Actinoplanes lichenicola Saeng-In et al. 2021
Actinoplanes lichenis Phongsopitanun et al. 2016
Actinoplanes liguriensis Wink et al. 2006
Actinoplanes lobatus (Couch 1963) Stackebrandt and Kroppenstedt 1988
Actinoplanes luteus Suriyachadkun et al. 2015
Actinoplanes lutulentus Gao et al. 2014
Actinoplanes maris Xie et al. 2023
Actinoplanes missouriensis Couch 1963
Actinoplanes nipponensis Wink et al. 2014
Actinoplanes octamycinicus (ex Gauze et al., 1979) Tamura et al. 2011
Actinoplanes ovalisporus Saeng-In et al. 2021
Actinoplanes palleronii Goodfellow et al. 1990
Actinoplanes philippinensis Couch 1950
Actinoplanes polyasparticus Ding et al. 2023
Actinoplanes ramoplaninifer Marcone et al. 2017
Actinoplanes rectilineatus Lechevalier and Lechevalier 1975
Actinoplanes regularis (Couch 1963) Stackebrandt and Kroppenstedt 1988
Actinoplanes rhizophilus He et al. 2015
Actinoplanes rishiriensis Yamamura et al. 2012
Actinoplanes sediminis Qu et al. 2018
Actinoplanes siamensis Suriyachadkun et al. 2013
Actinoplanes sichuanensis Sun et al. 2009
Actinoplanes solisilvae Ma et al. 2020
Actinoplanes subglobosus Ngaemthao et al. 2016
Actinoplanes subtropicus Seong and Lee 2009
Actinoplanes teichomyceticus Wink et al. 2006
Actinoplanes tereljensis Ara et al. 2010
Actinoplanes toevensis Ara et al. 2010
Actinoplanes tropicalis Nurkanto et al. 2015
Actinoplanes utahensis Couch 1963
Actinoplanes xinjiangensis Sun et al. 2009
AP019371_s
CP005929_s
EU119240_s
JF096691_s
LOJP_s
LT827010_s
Allocatelliglobosispora Lee and Lee 2011
Allocatelliglobosispora scoriae Lee and Lee 2011
EU133208_s
Allorhizocola Sun et al. 2019
Allorhizocola rhizosphaerae Sun et al. 2019
DQ298295_s
Asanoa Lee and Hah 2002
Asanoa endophytica Niemhom et al. 2016
Asanoa ferruginea (Asano and Kawamoto 1986) Lee and Hah 2002
Asanoa hainanensis Xu et al. 2011
Asanoa iriomotensis Tamura and Sakane 2005
Asanoa ishikariensis Lee and Hah 2002
Asanoa siamensis Niemhom et al. 2013
Catellatospora Asano and Kawamoto 1986
Catellatospora aurea Liu et al. 2014
Catellatospora bangladeshensis Ara and Kudo 2006
Catellatospora chokoriensis Ara and Kudo 2006
Catellatospora citrea Asano and Kawamoto 1986
Catellatospora coxensis Ara and Kudo 2006
Catellatospora methionotrophica (Asano and Kawamoto 1988) Ara and Kudo 2006
Catellatospora paridis Jia et al. 2016
Catellatospora sichuanensis Liu et al. 2020
Catellatospora tagetis Zhou et al. 2015
Catellatospora tritici Yang et al. 2022
Catellatospora vulcania Jia et al. 2016
Catelliglobosispora Ara et al. 2008
Catelliglobosispora koreensis (Lee et al. 2000) Ara et al. 2008
EU132561_s
EU193042_s
JX489847_s
Catenuloplanes Yokota et al. 1993
Catenuloplanes atrovinosus Tamura et al. 1995
Catenuloplanes castaneus Tamura et al. 1995
Catenuloplanes crispus (Petrolini et al. 1993) Kudo et al. 1999
Catenuloplanes indicus Tamura et al. 1995
Catenuloplanes japonicus Yokota et al. 1993
Catenuloplanes nepalensis Tamura et al. 1995
Catenuloplanes niger Tamura et al. 1995
Couchioplanes Tamura et al. 1994
Couchioplanes caeruleus (Horan and Brodsky 1986) Tamura et al. 1994
Dactylosporangium Thiemann et al. 1967
Dactylosporangium aurantiacum Thiemann et al. 1967
Dactylosporangium cerinum Liu et al. 2015
Dactylosporangium darangshiense Seo and Lee 2010
Dactylosporangium fulvum Shomura et al. 1986
Dactylosporangium luridum Kim et al. 2010
Dactylosporangium luteum Kim et al. 2010
Dactylosporangium maewongense Chiaraphongphon et al. 2010
Dactylosporangium matsuzakiense Shomura and Niida 1983
Dactylosporangium roseum Shomura et al. 1985
Dactylosporangium salmoneum (ex Celmer et al. 1978) Kim et al. 2010
Dactylosporangium siamense Thawai and Suriyachadkun 2013
Dactylosporangium solaniradicis Fan et al. 2016
Dactylosporangium sucinum Phongsopitanun et al. 2016
Dactylosporangium thailandense Thiemann et al. 1967
Dactylosporangium tropicum Thawai et al. 2011
Dactylosporangium vinaceum Shomura et al. 1983
Hamadaea Ara et al. 2008
Hamadaea flava Chu et al. 2016
Hamadaea tsunoensis (Asano et al. 1989) Ara et al. 2008
Jidongwangia Han et al. 2023
Jidongwangia harbinensis Han et al. 2023
Krasilnikovia Ara and Kudo 2007
Krasilnikovia cinnamomea Ara and Kudo 2007
Longispora Matsumoto et al. 2003
EU132986_s
Longispora albida Matsumoto et al. 2003
Longispora fulva Shiratori-Takano et al. 2011
Longispora urticae Piao et al. 2017
Luedemannella Ara and Kudo 2007
Luedemannella flava Ara and Kudo 2007
Luedemannella helvata Ara and Kudo 2007
Mangrovihabitans Liu et al. 2017
Mangrovihabitans endophyticus Liu et al. 2017
Micromonospora Ørskov 1923
EF428030_s
JNZS_s
JOAN_s
JQ073793_s
Micromonospora acroterricola Carro et al. 2019
Micromonospora alfalfae Riesco et al. 2022
Micromonospora andamanensis (Supong et al. 2013) Nouioui et al. 2018
Micromonospora antibiotica Lee et al. 2022
Micromonospora arida Carro et al. 2019
Micromonospora aurantiaca Sveshnikova et al. 1969
Micromonospora auratinigra Thawai et al. 2004
Micromonospora avicenniae Li et al. 2013
Micromonospora azadirachtae Kuncharoen et al. 2019
Micromonospora cabrerizensis Riesco et al. 2022
Micromonospora caldifontis Thawai et al. 2019
Micromonospora carbonacea Luedemann and Brodsky 1965
Micromonospora chaiyaphumensis Jongrungruangchok et al. 2008
Micromonospora chalcea (Foulerton 1905) Ørskov 1923
Micromonospora chersina Tomita et al. 1992
Micromonospora chokoriensis Ara and Kudo 2007
Micromonospora citrea Kroppenstedt et al. 2005
Micromonospora coerulea Jensen 1932
Micromonospora coriariae Trujillo et al. 2006
Micromonospora costi Thawai 2015
Micromonospora coxensis Ara and Kudo 2007
Micromonospora craniellae Li et al. 2019
Micromonospora craterilacus Ay et al. 2020
Micromonospora cremea Carro et al. 2012
Micromonospora deserti Saygin et al. 2020
Micromonospora eburnea Thawai et al. 2005
Micromonospora echinaurantiaca Kroppenstedt et al. 2005
Micromonospora echinofusca Kroppenstedt et al. 2005
Micromonospora echinospora Luedemann and Brodsky 1964
Micromonospora endolithica Hirsch et al. 2004
Micromonospora endophytica (Xie et al. 2011) Li et al. 2019
Micromonospora equina Everest and Meyers 2013
Micromonospora ferruginea Back et al. 2021
Micromonospora fiedleri (Goodfellow et al. 2013) Nouioui et al. 2018
Micromonospora fluminis Pozo et al. 2020
Micromonospora fluostatini Phongsopitanun et al. 2015
Micromonospora foliorum Riesco et al. 2022
Micromonospora fulva Lee and Whang 2017
Micromonospora fulviviridis Kroppenstedt et al. 2005
Micromonospora gifhornensis (Rheims et al. 1998) Nouioui et al. 2018
Micromonospora globbae Kuncharoen et al. 2018
Micromonospora globispora Carro et al. 2019
Micromonospora grosourdyae (Ngaemthao et al. 2017) Carro and Oren 2022
Micromonospora haikouensis Xie et al. 2012
Micromonospora halophytica Weinstein et al. 1968
Micromonospora halotolerans Carro et al. 2013
Micromonospora harpali Fang et al. 2015
Micromonospora hortensis Riesco et al. 2022
Micromonospora humi Songsumanus et al. 2011
Micromonospora humida Ra et al. 2021
Micromonospora humidisoli Lee et al. 2022
Micromonospora inaquosa Carro et al. 2019
Micromonospora inositola Kawamoto et al. 1974
Micromonospora inyonensis Kroppenstedt et al. 2005
Micromonospora jinlongensis Gao et al. 2013
Micromonospora kangleipakensis Nimaichand et al. 2013
Micromonospora krabiensis Jongrungruangchok et al. 2008
Micromonospora lupini Trujillo et al. 2007
Micromonospora lutea (Liao et al. 2009) Nouioui et al. 2018
Micromonospora luteifusca Carro et al. 2017
Micromonospora luteiviridis Carro et al. 2018
Micromonospora mangrovi Xie et al. 2016
Micromonospora maoerensis Li et al. 2013
Micromonospora marina Tanasupawat et al. 2010
Micromonospora maris (Goodfellow et al. 2012) Nouioui et al. 2018
Micromonospora maritima Songsumanus et al. 2013
Micromonospora matsumotoense (Asano et al. 1989) Lee et al. 2000
Micromonospora mirobrigensis Trujillo et al. 2005
Micromonospora musae Kuncharoen et al. 2021
Micromonospora narathiwatensis Thawai et al. 2008
Micromonospora nickelidurans Lin et al. 2015
Micromonospora nigra (Weinstein et al. 1968) Kasai et al. 2000
Micromonospora noduli Carro et al. 2016
Micromonospora okii Komaki et al. 2022
Micromonospora olivasterospora Kawamoto et al. 1983
Micromonospora orduensis Veyisoglu et al. 2020
Micromonospora oryzae Kittiwongwattana et al. 2015
Micromonospora ovatispora Li and Hong 2016
Micromonospora pallida (Luedemann and Brodsky 1964) Kasai et al. 2000
Micromonospora palomenae Fang et al. 2015
Micromonospora parathelypteridis Zhao et al. 2017
Micromonospora pattaloongensis Thawai et al. 2008
Micromonospora pelagivivens Intra et al. 2020
Micromonospora peucetia Kroppenstedt et al. 2005
Micromonospora phaseoli (Wang et al. 2013) Nouioui et al. 2018
Micromonospora phytophila Carro et al. 2018
Micromonospora pisi Garcia et al. 2010
Micromonospora polyrhachis Xiang et al. 2014
Micromonospora profundi Veyisoglu et al. 2016
Micromonospora provocatoris Abdel_Mageed et al. 2021
Micromonospora purpureochromogenes (Waksman and Curtis 1916) Luedemann 1971
Micromonospora qiuiae (Xi et al. 2012) Nouioui et al. 2018
Micromonospora radicis Kuncharoen et al. 2019
Micromonospora rhizosphaerae Wang et al. 2011
Micromonospora rifamycinica Huang et al. 2008
Micromonospora rosaria Horan and Brodsky 1986
Micromonospora rubida Sun et al. 2021
Micromonospora saelicesensis Trujillo et al. 2007
Micromonospora sagamiensis Kroppenstedt et al. 2005
Micromonospora salmantinae Riesco et al. 2022
Micromonospora schwarzwaldensis Gurovic et al. 2013
Micromonospora sediminicola Supong et al. 2013
Micromonospora sediminimaris (Dai et al. 2010) Nouioui et al. 2018
Micromonospora sediminis Phongsopitanun et al. 2016
Micromonospora siamensis Thawai et al. 2006
Micromonospora soli Thawai et al. 2016
Micromonospora solifontis Duangupama et al. 2023
Micromonospora sonchi (Ma et al. 2016) Carro and Oren 2022
Micromonospora sonneratiae Li et al. 2013
Micromonospora spongicola Supong et al. 2013
Micromonospora tarapacensis Villalobos et al. 2021
Micromonospora taraxaci Zhao et al. 2014
Micromonospora terminaliae Kaewkla et al. 2017
Micromonospora thawaii Carro and Oren 2022
Micromonospora thermarum Pansomsuay et al. 2023
Micromonospora trifolii Riesco et al. 2022
Micromonospora tulbaghiae Kirby and Meyers 2010
Micromonospora ureilytica Carro et al. 2016
Micromonospora veneta Kaewkla et al. 2022
Micromonospora vinacea Carro et al. 2016
Micromonospora violae Zhang et al. 2014
Micromonospora viridifaciens Kroppenstedt et al. 2005
Micromonospora vulcania Jia et al. 2016
Micromonospora wenchangensis Ren et al. 2013
Micromonospora yangpuensis Zhang et al. 2012
Micromonospora yasonensis Veyisoglu et al. 2017
Micromonospora zamorensis Carro et al. 2012
Micromonospora zeae Shen et al. 2014
Micromonospora zhangzhouensis Fu et al. 2020
Micromonospora zhanjiangensis Zhang et al. 2015
Micromonospora zingiberis (Thawai et al. 2018) Kuncharoen et al. 2019
QGKS_s
QKKX_s
RJWA_s
SHKZ_s
SMKG_s
SMKN_s
Verrucosispora rhizosphaerae Xie et al. 2018
WBKR_s
Natronosporangium Sorokin et al. 2022
ADGO01000419_s
FJ152655_s
FJ479312_s
FN667447_s
GQ263862_s
Natronosporangium hydrolyticum Sorokin et al. 2022
Nucisporomicrobium Han et al. 2022
Nucisporomicrobium flavum Han et al. 2022
PAC000129_g
PAC000129_s
Phytohabitans Inahashi et al. 2010
Phytohabitans flavus Inahashi et al. 2012
Phytohabitans houttuyneae Inahashi et al. 2012
Phytohabitans kaempferiae Niemhom et al. 2016
Phytohabitans rumicis Inahashi et al. 2012
Phytohabitans suffuscus Inahashi et al. 2010
Pilimelia Kane 1966
Pilimelia anulata Kane 1966
Pilimelia columellifera Vobis et al. 1986
Pilimelia terevasa Kane 1966
Planosporangium Wiese et al. 2008
Planosporangium flavigriseum Wiese et al. 2008
Planosporangium mesophilum Cao et al. 2011
Planosporangium thailandense Thawai et al. 2013
Plantactinospora Qin et al. 2009
CP022961_s
FN667138_s
Plantactinospora alkalitolerans Carro et al. 2023
Plantactinospora endophytica Zhu et al. 2012
Plantactinospora mayteni Qin et al. 2009
Plantactinospora siamensis (Thawai et al. 2010) Zhu et al. 2012
Plantactinospora solaniradicis Li et al. 2018
Plantactinospora sonchi Ma et al. 2015
Plantactinospora soyae Guo et al. 2016
Plantactinospora veratri Xing et al. 2015
Polymorphospora Tamura et al. 2006
Polymorphospora rubra Tamura et al. 2006
Pseudosporangium Ara et al. 2008
Pseudosporangium ferrugineum Ara et al. 2008
Rhizocola Matsumoto et al. 2014
Rhizocola hellebori Matsumoto et al. 2014
Rugosimonospora Monciardini et al. 2009
Rugosimonospora acidiphila Monciardini et al. 2009
Rugosimonospora africana Monciardini et al. 2009
Salinispora Maldonado et al. 2005
Salinispora arenicola Maldonado et al. 2005
Salinispora cortesiana Román-Ponce et al. 2020
Salinispora fenicalii Román-Ponce et al. 2020
Salinispora goodfellowii Román-Ponce et al. 2020
Salinispora mooreana Román-Ponce et al. 2020
Salinispora oceanensis Román-Ponce et al. 2020
Salinispora pacifica Ahmed et al. 2014
Salinispora tropica Maldonado et al. 2005
Salinispora vitiensis Román-Ponce et al. 2020
Spirilliplanes Tamura et al. 1997
Spirilliplanes yamanashiensis Tamura et al. 1997
Virgisporangium Tamura et al. 2001
FJ479084_s
Virgisporangium aliadipatigenens Otoguro et al. 2011
Virgisporangium aurantiacum Tamura et al. 2001
Virgisporangium myanmarense Yamamura et al. 2018
Virgisporangium ochraceum Tamura et al. 2001
Data type count
  • 0
    Genome
  • 0
    16S rRNA