Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales
Roseobacteraceae Liang et al. 2021
Actibacterium Lucena et al. 2012
Actibacterium atlanticum Li et al. 2015
Actibacterium lipolyticum (Park et al. 2015) Hördt et al. 2020
Actibacterium mucosum Lucena et al. 2012
Actibacterium naphthalenivorans (Jeong et al. 2015) Hördt et al. 2020
Actibacterium pelagium Guo et al. 2017
Actibacterium ureilyticum Lin et al. 2016
JQMY_s
Aliiruegeria Liang et al. 2021
Aliiruegeria haliotis (Hyun et al. 2013) Liang et al. 2021
Aliiruegeria lutimaris (Jung et al. 2010) Liang et al. 2021
Aliiruegeria sabulilitoris (Park et al. 2014) Liang et al. 2021
Pseudoruegeria aestuarii Cha et al. 2016
Pseudoruegeria insulae Park et al. 2018
Pseudoruegeria limi Lee et al. 2014
Pseudoruegeria litorisediminis Park et al. 2018
Pseudoruegeria marinistellae Zhang et al. 2017
Aliishimia Kim et al. 2019
Aliishimia ponticola Kim et al. 2019
Antarctobacter Labrenz et al. 1998
Antarctobacter heliothermus Labrenz et al. 1998
Antarctobacter jejuensis Kim et al. 2021
CP022540_s
AY845241_g
AY845241_s
AY845244_s
Celeribacter Ivanova et al. 2010
AMRK_s
Celeribacter arenosi (Romanenko et al. 2011) Hördt et al. 2020
Celeribacter baekdonensis Lee et al. 2012
Celeribacter ethanolicus Jian et al. 2016
Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014
Celeribacter indicus Lai et al. 2014
Celeribacter litoreus Li et al. 2022
Celeribacter marinus Baek et al. 2014
Celeribacter naphthalenivorans Oh et al. 2015
Celeribacter neptunius Ivanova et al. 2010
Celeribacter persicus Jami et al. 2016
CP028475_s
Citreimonas Choi and Cho 2006
Citreimonas salinaria Choi and Cho 2006
Dinoroseobacter Biebl et al. 2005
Dinoroseobacter shibae Biebl et al. 2005
JQ660981_s
Donghicola Yoon et al. 2007
Donghicola eburneus Yoon et al. 2007
Donghicola mangrovi Charoenyingcharoen et al. 2021
Donghicola tyrosinivorans Sung et al. 2015
Epibacterium Penesyan et al. 2013
Epibacterium ulvae Penesyan et al. 2013
Falsihalocynthiibacter Liang et al. 2021
Falsihalocynthiibacter arcticus (Baek et al. 2015) Liang et al. 2021
Falsiruegeria Liang et al. 2021
Falsiruegeria litorea (Lucena et al. 2014) Liang et al. 2021
Falsiruegeria mediterranea (Lucena et al. 2014) Liang et al. 2021
Gymnodinialimonas Jiang et al. 2022
CP000264_s
Gymnodinialimonas ceratoperidinii Jiang et al. 2022
Gymnodinialimonas phycosphaerae Peng et al. 2023
Hasllibacter Kim et al. 2012
Hasllibacter halocynthiae Kim et al. 2012
Jannaschia Wagner-Döbler et al. 2003
Jannaschia aquimarina Park and Yoon 2012
Jannaschia confluentis Park et al. 2018
Jannaschia donghaensis Yoon et al. 2007
Jannaschia faecimaris Jung and Yoon 2014
Jannaschia formosa Zhang et al. 2019
Jannaschia helgolandensis Wagner-Döbler et al. 2003
Jannaschia marina Chen et al. 2021
Jannaschia pohangensis Kim et al. 2008
Jannaschia rubra Macián et al. 2005
Jannaschia seohaensis Yoon et al. 2010
Jannaschia seosinensis Choi et al. 2006
Ketogulonicigenium Urbance et al. 2001
HM129937_s
Ketogulonicigenium robustum Urbance et al. 2001
Ketogulonicigenium vulgare Urbance et al. 2001
Leisingera Schaefer et al. 2002
AAYC_s
AFCF_s
CP035417_s
JWLI_s
Leisingera aquaemixtae (Park et al. 2014) Breider et al. 2014
Leisingera aquimarina Vandecandelaere et al. 2008
Leisingera caerulea (Vandecandelaere et al. 2009) Breider et al. 2014
Leisingera daeponensis (Yoon et al. 2007) Breider et al. 2014
Leisingera methylohalidivorans Schaefer et al. 2002
Leisingera thetidis Kim et al. 2023
LYUZ_s
Lentibacter Li et al. 2012
Lentibacter algarum Li et al. 2012
QVMW_s
LFTY_g
LFTY_s
Litoreibacter Romanenko et al. 2011
Litoreibacter albidus Romanenko et al. 2011
Litoreibacter arenae (Kim et al. 2009) Kim et al. 2012
Litoreibacter ascidiaceicola Kim et al. 2014
Litoreibacter halocynthiae Kim et al. 2013
Litoreibacter janthinus Romanenko et al. 2011
Litoreibacter meonggei Kim et al. 2012
Litoreibacter ponti Park et al. 2014
Litoreibacter roseus Kanamuro et al. 2021
Loktanella Van Trappen et al. 2004
Loktanella atrilutea Hosoya and Yokota 2007
Loktanella fryxellensis Van Trappen et al. 2004
Loktanella gaetbuli Lee et al. 2023
Loktanella salsilacus Van Trappen et al. 2004
SELQ_s
Lutimaribacter Yoon et al. 2009
Lutimaribacter marinistellae Zhang et al. 2016
Lutimaribacter pacificus (Yuan et al. 2009) Iwaki et al. 2013
Lutimaribacter saemankumensis Yoon et al. 2009
Maliponia Jung et al. 2016
Maliponia aquimaris Jung et al. 2016
Mameliella Zheng et al. 2010
Mameliella alba Zheng et al. 2010
Mameliella sediminis Zheng et al. 2022
Marinovum Martens et al. 2006
Marinovum algicola (Lafay et al. 1995) Martens et al. 2006
Marinovum faecis Yoon et al. 2017
Maritimibacter Lee et al. 2007
Maritimibacter alexandrii Wang et al. 2021
Maritimibacter alkaliphilus Lee et al. 2007
Maritimibacter dapengensis Yu et al. 2022
Maritimibacter harenae Khan et al. 2021
Marivita Hwang et al. 2009
Marivita byusanensis (Yoon et al. 2010) Yoon et al. 2012
Marivita cryptomonadis Hwang et al. 2009
Marivita geojedonensis Yoon et al. 2013
Marivita hallyeonensis Yoon et al. 2012
Marivita lacus Zhong et al. 2015
Marivita litorea Hwang et al. 2009
Marivita roseacus Budinoff et al. 2011
Mesobacterium Kong et al. 2022
Mesobacterium pallidum Kong et al. 2022
Mesobaculum Li et al. 2021
Mesobaculum littorinae Li et al. 2021
Muriiphilus Wang et al. 2021
Muriiphilus fusiformis Wang et al. 2021
Nereida Pujalte et al. 2005
Nereida ignava Pujalte et al. 2005
Oceanicola Cho and Giovannoni 2004
GU117994_s
Oceanicola granulosus Cho and Giovannoni 2004
QWDA_s
RZWH_s
Oceaniovalibus Liu et al. 2012
Oceaniovalibus guishaninsula Liu et al. 2012
Octadecabacter Gosink et al. 1998
AB180384_s
Octadecabacter algicola Jin et al. 2023
Octadecabacter antarcticus Gosink et al. 1998
Octadecabacter arcticus Gosink et al. 1998
Octadecabacter ascidiaceicola Kim et al. 2016
Octadecabacter dasysiphoniae Jin et al. 2023
Octadecabacter ponticola Park et al. 2016
Octadecabacter temperatus Billerbeck et al. 2015
Pacificibacter Romanenko et al. 2011
Pacificibacter aestuarii Hyeon et al. 2017
Pacificibacter marinus (Jung et al. 2011) Park et al. 2015
Pacificibacter maritimus Romanenko et al. 2011
Paenimaribius Park et al. 2019
Paenimaribius caenipelagi Park et al. 2019
Palleronia Martínez-Checa et al. 2005
Palleronia abyssalis Albuquerque et al. 2015
Palleronia aestuarii (Kim et al. 2010) Barnier et al. 2022
Palleronia marisminoris Martínez-Checa et al. 2005
Palleronia pelagia (Choi et al. 2007) Barnier et al. 2023
Palleronia pontilimi (Lee 2018) Barnier et al. 2022
Palleronia rufa Barnier et al. 2022
Palleronia salina (Choi et al. 2007) Barnier et al. 2022
Palleronia sediminis Sun et al. 2021
Palleronia soli Kim et al. 2015
UXAS_s
Pelagicola Kim et al. 2008
Pelagicola litoralis Kim et al. 2008
Shimia gijangensis (Kim et al. 2014) Arahal et al. 2019
Pelagimonas Hahnke et al. 2013
Pelagimonas varians Hahnke et al. 2013
Phaeobacter Martens et al. 2006
CP015124_s
FJ403103_s
FREY_s
JWLC_s
JWLD_s
Phaeobacter gallaeciensis (Ruiz-Ponte et al. 1998) Martens et al. 2006
Phaeobacter inhibens Martens et al. 2006
Phaeobacter italicus (Vandecandelaere et al. 2009) Wirth and Whitman 2018
Phaeobacter piscinae Sonnenschein et al. 2017
Phaeobacter porticola Breider et al. 2017
Pontibaca Kim et al. 2010
Pontibaca methylaminivorans Kim et al. 2010
Pontibaca salina Bo et al. 2022
Ponticoccus Hwang and Cho 2008
Ponticoccus alexandrii Yang et al. 2018
Ponticoccus litoralis Hwang and Cho 2008
Pseudoponticoccus marisrubri (Zhang et al. 2017) Liang et al. 2022
Poseidonocella Romanenko et al. 2012
Poseidonocella pacifica Romanenko et al. 2012
Poseidonocella sedimentorum Romanenko et al. 2012
Primorskyibacter Romanenko et al. 2011
Primorskyibacter aestuariivivens Park et al. 2016
Primorskyibacter marinus Wang et al. 2018
Primorskyibacter sedentarius Romanenko et al. 2011
Profundibacterium Lai et al. 2013
Profundibacterium mesophilum Lai et al. 2013
Pseudoruegeria Yoon et al. 2007
Pseudoruegeria aquimaris Yoon et al. 2007
Pseudosulfitobacter Liang et al. 2022
CP022417_s
JIBC_s
Pseudosulfitobacter koreense Jiang and Li 2023
Pseudosulfitobacter pseudonitzschiae (Hong et al. 2015) Liang et al. 2022
QBFF_s
Roseibacterium Suzuki et al. 2006
Roseibacterium beibuensis Mao et al. 2012
Roseibacterium elongatum Suzuki et al. 2006
Roseibacterium persicicum Yoon 2020
Roseicyclus Rathgeber et al. 2005
EQ055432_s
Roseicyclus mahoneyensis Rathgeber et al. 2005
Roseicyclus marinus Tang et al. 2018
Roseisalinus Labrenz et al. 2005
Roseisalinus antarcticus Labrenz et al. 2005
Roseivivax Suzuki et al. 1999
CP045360_s
Roseivivax halodurans Suzuki et al. 1999
Roseivivax halotolerans Suzuki et al. 1999
Roseivivax isoporae Chen et al. 2012
Roseivivax jejudonensis Jung et al. 2015
Roseivivax lentus Park et al. 2010
Roseivivax marinus Dai et al. 2014
Roseivivax sediminis Xiao et al. 2012
Roseobacter Shiba 1991
CP025804_s
Roseobacter cerasinus Muramatsu et al. 2020
Roseobacter denitrificans Shiba 1991
Roseobacter insulae Lee et al. 2023
Roseobacter litoralis Shiba 1991
Roseobacter ponti Jung et al. 2017
Roseovarius Labrenz et al. 1999
AB159201_s
AF468352_s
AY167260_s
AY654839_s
BDIY_s
CP020474_s
CP045393_s
CP045404_s
CP049037_s
DQ167248_s
DQ659416_s
GU437598_s
JQLS_s
LADY_s
ONZJ_s
QNGB_s
Roseovarius aestuarii Yoon et al. 2008
Roseovarius aestuariivivens Park et al. 2017
Roseovarius albus Lucena et al. 2014
Roseovarius amoyensis Li et al. 2019
Roseovarius antarcticus Deng et al. 2015
Roseovarius aquimarinus Kang et al. 2015
Roseovarius arcticus Lu et al. 2020
Roseovarius atlanticus Li et al. 2016
Roseovarius autotrophicus Slobodkina et al. 2023
Roseovarius azorensis Rajasabapathy et al. 2014
Roseovarius bejariae Castro et al. 2020
Roseovarius carneus Sun et al. 2022
Roseovarius confluentis Jia et al. 2017
Roseovarius faecimaris Cha et al. 2019
Roseovarius gaetbuli Park et al. 2014
Roseovarius gahaiensis Sun et al. 2020
Roseovarius halotolerans Oh et al. 2009
Roseovarius indicus Lai et al. 2011
Roseovarius lacus Pan et al. 2017
Roseovarius litoreus Jung et al. 2012
Roseovarius litorisediminis (Park et al. 2013) Hördt et al. 2020
Roseovarius lutimaris Choi et al. 2013
Roseovarius marisflavi Li et al. 2014
Roseovarius mucosus Biebl et al. 2005
Roseovarius nanhaiticus Wang et al. 2010
Roseovarius nitratireducens Shen et al. 2018
Roseovarius nubinhibens González et al. 2003
Roseovarius pacificus Wang et al. 2009
Roseovarius ponticola Park et al. 2019
Roseovarius ramblicola Castro et al. 2018
Roseovarius salinarum Wang et al. 2018
Roseovarius scapharcae Kim et al. 2015
Roseovarius spongiae Zhuang and Luo 2020
Roseovarius tibetensis Lu et al. 2019
Roseovarius tolerans Labrenz et al. 1999
Rubellimicrobium Denner et al. 2006
DQ129308_s
DQ532274_s
EF540401_s
FM872825_s
FM874293_s
GQ396945_s
HQ697766_s
JQ769762_s
JX079390_s
Rubellimicrobium aerolatum Weon et al. 2009
Rubellimicrobium mesophilum Dastager et al. 2008
Rubellimicrobium roseum Cao et al. 2013
Rubellimicrobium rubrum Jiang et al. 2020
Rubellimicrobium thermophilum Denner et al. 2006
Ruegeria Uchino et al. 1999
CP031946_s
CP045384_s
DS999531_s
JAAGOX_s
JQEZ_s
JWLJ_s
JWLK_s
LGXZ_s
OMPS_s
QOCF_s
Ruegeria alba Du et al. 2022
Ruegeria arenilitoris Park and Yoon 2013
Ruegeria atlantica (Rüger and Höfle 1992) Uchino et al. 1999
Ruegeria conchae Lee et al. 2012
Ruegeria denitrificans Arahal et al. 2018
Ruegeria faecimaris Oh et al. 2011
Ruegeria haliotis Cao et al. 2021
Ruegeria halocynthiae Kim et al. 2012
Ruegeria intermedia Kämpfer et al. 2013
Ruegeria lacuscaerulensis (Petursdottir and Kristjansson 1999) Yi et al. 2007
Ruegeria marina Huo et al. 2011
Ruegeria marisrubri Zhang et al. 2017
Ruegeria meonggei Kim et al. 2014
Ruegeria meteori (Rüger and Höfle 1992) Hördt et al. 2020
Ruegeria pomeroyi (González et al. 2003) Yi et al. 2007
Ruegeria profundi Zhang et al. 2017
Ruegeria sediminis Baek et al. 2020
Sagittula Gonzalez et al. 1997
CP021913_s
Sagittula marina Lee et al. 2013
Sagittula salina Satari et al. 2022
Sagittula stellata Gonzáles et al. 1997
Salibaculum Zhu et al. 2021
HE576995_s
Salibaculum griseiflavum Zhu et al. 2021
Salibaculum halophilum Zhu et al. 2021
Salinihabitans Yoon et al. 2009
Salinihabitans flavidus Yoon et al. 2009
Salipiger Martínez-Cánovas et al. 2004
CP014596_s
CP022192_s
Salipiger abyssi (Lin et al. 2014) Liang et al. 2021
Salipiger aestuarii (Park et al. 2011) Wirth and Whitman 2018
Salipiger bermudensis (Cho and Giovannoni 2006) Wirth and Whitman 2018
Salipiger manganoxidans (Rajasabapathy et al. 2016) Wirth and Whitman 2018
Salipiger mangrovisoli Du et al. 2021
Salipiger marinus (Lai et al. 2011) Wirth and Whitman 2018
Salipiger mucosus Martínez-Cánovas et al. 2004
Salipiger pacificus (Dai et al. 2006) Hördt et al. 2020
Salipiger pallidus (Cai et al. 2017) Du et al. 2021
Salipiger pentaromativorans Li et al. 2023
Salipiger profundus (Li et al. 2015) Wirth and Whitman 2018
Salipiger thiooxidans (Sorokin et al. 2006) Wirth and Whitman 2018
SELP_s
Yangia mangrovi Verma et al. 2021
Sediminimonas Wang et al. 2009
Sediminimonas qiaohouensis Wang et al. 2009
Seohaeicola Yoon et al. 2009
Seohaeicola nanhaiensis Xie et al. 2015
Seohaeicola saemankumensis Yoon et al. 2009
Seohaeicola westpacificensis Xian et al. 2014
Seohaeicola zhoushanensis Wang et al. 2016
Shimia Choi and Cho 2006
LAJH_s
Shimia abyssi (Nogi et al. 2016) Wirth and Whitman 2018
Shimia aestuarii (Yi and Chun 2007) Wirth and Whitman 2018
Shimia aquaeponti (Park et al. 2015) Wirth and Whitman 2018
Shimia biformata Hameed et al. 2013
Shimia haliotis Hyun et al. 2013
Shimia isoporae Chen et al. 2011
Shimia marina Choi and Cho 2006
Shimia ponticola Chen et al. 2023
Shimia sagamensis Nogi et al. 2015
Shimia sediminis Zhu et al. 2021
Shimia thalassica Arahal et al. 2019
Sulfitobacter Sorokin 1996
CP025803_s
CP045374_s
DS999215_s
EU795102_s
GQ249467_s
JQ045814_s
JQ073802_s
LWEQ_s
Sulfitobacter aestuarii Park et al. 2018
Sulfitobacter aestuariivivens Park and Yoon 2021
Sulfitobacter albidus Kim et al. 2022
Sulfitobacter alexandrii Yang et al. 2021
Sulfitobacter algicola Wang et al. 2022
Sulfitobacter brevis Labrenz et al. 2000
Sulfitobacter delicatus Ivanova et al. 2004
Sulfitobacter donghicola Yoon et al. 2007
Sulfitobacter dubius Ivanova et al. 2004
Sulfitobacter faviae Kumari et al. 2016
Sulfitobacter geojensis Kwak et al. 2014
Sulfitobacter guttiformis (Labrenz et al. 2000) Yoon et al. 2007
Sulfitobacter indolifex (Wagner-Döbler et al. 2004) Liu et al. 2017
Sulfitobacter litoralis Park et al. 2007
Sulfitobacter marinus Yoon et al. 2007
Sulfitobacter maritimus Lian et al. 2021
Sulfitobacter mediterraneus Pukall et al. 1999
Sulfitobacter noctilucae Kwak et al. 2014
Sulfitobacter noctilucicola Kwak et al. 2014
Sulfitobacter pacificus Fukui et al. 2015
Sulfitobacter pontiacus Sorokin 1996
Sulfitobacter porphyrae Fukui et al. 2014
Sulfitobacter profundi Song et al. 2020
Sulfitobacter sabulilitoris Park et al. 2019
Sulfitobacter salinus Yoon 2020
Sulfitobacter sediminilitoris Park et al. 2020
Sulfitobacter undariae Park et al. 2015
Tateyamaria Kurahashi and Yokota 2008
CP019312_s
JWLL_s
Tateyamaria armeniaca Yoon 2020
Tateyamaria omphalii Kurahashi and Yokota 2008
Tateyamaria pelophila Sass et al. 2010
Thalassobacter Macian et al. 2005
Thalassobacter stenotrophicus Macian et al. 2005
Thalassobius Arahal et al. 2005
Thalassobius aquimarinus Kurilenko et al. 2021
Thalassobius autumnalis Pujalte et al. 2018
Thalassobius gelatinovorus (Rüger and Höfle 1992) Arahal et al. 2006
Thalassobius litoralis (Iwaki et al. 2013) Hördt et al. 2020
Thalassobius litorarius Park et al. 2016
Thalassobius mangrovi Chen et al. 2021
Thalassobius mediterraneus Arahal et al. 2005
Thalassobius taeanensis (Jin et al. 2011) Hördt et al. 2020
Thalassococcus Lee et al. 2007
PAC001324_s
Thalassococcus halodurans Lee et al. 2007
Thalassococcus lentus Park et al. 2013
Thalassococcus profundi Yu et al. 2019
Thiosulfatihalobacter Wu et al. 2022
Thiosulfatihalobacter marinus Wu et al. 2022
Tranquillimonas Harwati et al. 2008
Tranquillimonas alkanivorans Harwati et al. 2008
Tranquillimonas rosea (Zhang et al. 2014) Hördt et al. 2020
Tropicibacter Harwati et al. 2009
DQ153127_s
Tropicibacter alexandrii Wang et al. 2019
Tropicibacter multivorans Lucena et al. 2012
Tropicibacter naphthalenivorans Harwati et al. 2009
Tropicibacter phthalicicus Iwaki et al. 2012
Tropicimonas Harwati et al. 2009
AM176881_s
QEYE_s
QMEK_s
Tropicimonas aquimaris Oh et al. 2012
Tropicimonas arenosa Oh et al. 2016
Tropicimonas isoalkanivorans Harwati et al. 2009
Tropicimonas sediminicola Shin et al. 2012
Wenxinia Ying et al. 2007
Wenxinia marina Ying et al. 2007
Wenxinia saemankumensis Park et al. 2014
Data type count
  • 0
    Genome
  • 0
    16S rRNA