Tools

Several bioinformatics tools are provided either as a web-service or standalone software to support your specific needs.

ANI Calculator

Average Nucleotide Identity (ANI) is an online calculator used to compare two prokaryotic genome sequences.

Visit the tool's main page here

BCG54

Bacterial Core Gene 54 (BCG54) uses 54 single copy core genes to perfrom various phylogenetic analysis.

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OrthoANI-usearch tool

OrthoANI-usearch (OrthoANIu) is a standalone software used to calculate OrthoANI using USEARCH. For large genomes, it is >100 X faster than BLAST-based ANI algorithms.

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OrthoANI

Orthologous Average Nucleotide Identity Tool (OAT) is a standalone software used to perform OrthoANI algorithm and BLAST calculations to measure the overall similarity between two genomes sequences.

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ContEst16S

ContEst16S is a web service that enables the detection of potential contaminants in your bacterial or archaeal draft genome assemblies.

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EzEditor2

EzEditor2 is a new and improved iteration of the original EzEditor software.

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EzBioCloud's Label Replacer

This tool can be used to replace zZ-formated labels with the desired formats in Newick or other text files.

Visit the tool's main page here