Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria
Betaproteobacteria Garrity et al. 2006
AB252926_o
AB252926_f
AB252926_g
AM259833_o
AM259833_f
AM259833_g
DQ889930_g
JF824778_g
JQ062689_f
JQ062689_g
AY948046_o
AY948046_f
AY948046_g
Burkholderiales Garrity et al. 2006
Alcaligenaceae De Ley et al. 1986
AB021352_g
Achromobacter Yabuuchi and Yano 1981
Advenella Advenella Coenye et al. 2005
Alcaligenes Castellani and Chalmers 1919
Allopusillimonas Babich et al. 2023
Basilea Whiteson et al. 2014
Bordetella Moreno-Lopez 1952
Brackiella Willems et al. 2002
Caenimicrobium Felföldi et al. 2017
Candidimonas Vaz-Moreira et al. 2011
Castellaniella Kämpfer et al. 2006
Corticimicrobacter Li et al. 2019
DQ346474_g
DQ346482_g
Eoetvoesiella Deshmukh and Oren 2023
GQ249353_g
Jezberella Hahn et al. 2022
Kerstersia Coenye et al. 2003
Kinetoplastibacterium Du et al. 1994
Mesopusillimonas Babich et al. 2023
Neopusillimonas Babich et al. 2023
Oligella Rossau et al. 1987
Orrella Carlier et al. 2019
PAC000711_g
Paenalcaligenes Kämpfer et al. 2010
Paracandidimonas Kämpfer et al. 2017
Paralcaligenes Kim et al. 2011
Parapusillimonas Kim et al. 2010
Pelistega Vandamme et al. 1998
Pigmentiphaga Blümel et al. 2001
Pollutimonas Babich et al. 2023
Pusillimonas Stolz et al. 2005
Saccharedens Lin et al. 2017
Sheuella Hahn et al. 2022
Taylorella Sugimoto et al. 1984
Verticiella Vandamme et al. 2015
Zwartia Hahn et al. 2022
Branchiomonas_f
Branchiomonas Toenshoff et al. 2012
Burkholderiaceae Garrity et al. 2006
Burkholderia Yabuuchi et al. 1993
Caballeronia Dobritsa and Samadpour 2016
Chitinasiproducens Madhaiyan et al. 2020
Glomeribacter Bianciotto et al. 2003
Mycetohabitans Estrada-de Los Santos et al. 2018
Mycoavidus Ohshima et al. 2016
PAC001916_g
Pandoraea Coenye et al. 2000
Paraburkholderia Sawana et al. 2015
Pararobbsia Lin et al. 2020
Robbsia Lopes-Santos et al. 2017
Tremblaya Thao et al. 2002
Trinickia Estrada-de Los Santos et al. 2018
Vallotia Toenshoff et al. 2012
Xiphinematincola Palomares-Rius et al. 2021
Comamonadaceae Willems et al. 1991
AB076847_g
AB485758_g
Acidovorax Willems et al. 1990
AF418942_g
AJ565430_g
Alicycliphilus Mechichi et al. 2003
AM411934_g
Brachymonas Hiraishi et al. 1995
Caenimonas Ryu et al. 2008
Calidifontimicrobium Ding et al. 2019
Comamonas (ex Davis and Park 1962) DeVos et al. 1985
Corticibacter Fang et al. 2015
Curvibacter Ding and Yokota 2004
Delftia Wen et al. 1999
Diaphorobacter Khan and Hiraishi 2003
EU015086_g
EU104128_g
EU735703_g
EU801607_g
EU937973_g
EU978826_g
Extensimonas Zhang et al. 2013
FJ374243_g
FJ437765_g
FJ517712_g
FJ660572_g
Franklinella Bernard et al. 2022
Giesbergeria Grabovich et al. 2006
HQ178927_g
Hydrogenophaga Willems et al. 1989
Hylemonella Spring et al. 2004
JF697503_g
JN679217_g
Lampropedia Schroeter 1886
Limnohabitans Hahn et al. 2010
Macromonas Utermohl and Koppe 1924
Malikia Spring et al. 2005
Melaminivora Wang et al. 2014
Oryzisolibacter Vaz-Moreira et al. 2017
Ottowia Spring et al. 2004
Polaromonas Irgens et al. 1996
Pseudacidovorax Kämpfer et al. 2008
Pseudorhodoferax Bruland et al. 2009
Pulveribacter Heo et al. 2019
Ramlibacter Heulin et al. 2003
Rhodoferax Hiraishi et al. 1992
Serpentinimonas Bird et al. 2021
Simplicispira Grabovich et al. 2006
Symbiobacter Liu et al. 2013
Tepidicella França et al. 2006
Tepidimonas Moreira et al. 2000
Tibeticola Khan et al. 2017
Vandammella Bernard et al. 2022
Variovorax Willems et al. 1991
Verminephrobacter Pinel et al. 2012
Xenophilus Blümel et al. 2001
Xylophilus Willems et al. 1987
Derxia_f
Derxia Jensen et al. 1960
JF697555_g
HQ166641_f
HQ166641_g
Lautropia_f
Lautropia Gerner-Smidt et al. 1995
Limnobacter_f
Limnobacter Spring et al. 2001
OM156_f
EU803579_g
OM156_g
Oxalobacteraceae Garrity et al. 2006
AB486719_g
Actimicrobium Kim et al. 2021
AJ012069_g
AJ575697_g
AVCC_g
Collimonas de Boer et al. 2004
DQ264588_g
DQ351915_g
DQ469209_g
Duganella Hiraishi et al. 1997
EF516828_g
EU266905_g
FM178829_g
Glaciimonas Zhang et al. 2011
GU295961_g
GU563773_g
Herbaspirillum Baldani et al. 1986
Herminiimonas Fernandes et al. 2005
Janthinobacterium De Ley et al. 1978
KB467824_g
Lacisediminimonas Wu et al. 2020
Massilia La Scola et al. 2000
Noviherbaspirillum Lin et al. 2013
Oxalicibacterium Tamer et al. 2003
Oxalobacter Allison et al. 1985
Paraherbaspirillum Anandham et al. 2013
Paucimonas Jendrossek 2001
Profftella Nakabachi et al. 2013
REGP_g
Rugamonas Austin and Moss 1987
Sapientia Felföldi et al. 2020
Solimicrobium Margesin et al. 2018
Telluria Bowman et al. 1993
Undibacterium Kämpfer et al. 2007
Y11585_g
Piscinibacterium_f
Piscinibacterium Sheu et al. 2016
Quisquiliibacterium_f
EF520450_g
EU083484_g
FJ820419_g
Quisquiliibacterium Felföldi et al. 2017
Zeimonas Lin et al. 2022
Ralstonia_f
AKCV_g
Ampullimonas França et al. 2016
Cupriavidus Makkar and Casida 1987
DQ337069_g
DQ450176_g
Ephemeroptericola Kim et al. 2019
Formosimonas Chen et al. 2017
Hydromonas Vaz-Moreira et al. 2015
Parvibium Chen et al. 2018
Polynucleobacter Heckmann and Schmidt 1987
Ralstonia Yabuuchi et al. 1996
Sphaerotilaceae Liu et al. 2023
AB240291_g
AF234753_g
AF293005_g
Albitalea Khan et al. 2021
Aquabacterium Kalmbach et al. 1999
Aquariibacter Cui et al. 2021
Aquincola Lechner et al. 2007
AY429712_g
AYMW_g
Azohydromonas Xie and Yokota 2005
Caldimonas Takeda et al. 2002
EU881220_g
FJ478604_g
HM481326_g
HM769658_g
Ideonella Malmqvist et al. 1994
Inhella Song et al. 2009
JZUE_g
Leptothrix Kutzing 1843
LJID_g
Methylibium Nakatsu et al. 2006
PAC001918_g
PAC002945_g
Paucibacter Rapala et al. 2005
Pelomonas Xie and Yokota 2005
Piscinibacter Stackebrandt et al. 2009
Pseudorivibacter Zhou et al. 2020
Rhizobacter Goto and Kuwata 1988
Rivibacter Stackebrandt et al. 2009
Roseateles Roseateles Suyama et al. 1999
Rubrivivax Willems et al. 1991
Saezia Medina-Pascual et al. 2020
Scleromatobacter Mieszkin et al. 2023
Sphaerotilus Kutzing 1833
Vitreoscilla_g1
Sutterellaceae Morotomi et al. 2011
AP014683_g
DQ196633_g
Duodenibacillus Mailhe et al. 2017
FKII_g
Mesosutterella Sakamoto et al. 2018
Parasutterella Nagai et al. 2009
Sutterella Wexler et al. 1996
Turicimonas Lagkouvardos et al. 2017
Thiomonas_f
Thiomonas Moreira and Amils 1997
Casimicrobium_o
Casimicrobiaceae Song et al. 2020
Casimicrobium Song et al. 2020
EU800906_o
EU800906_f
EU800906_g
FJ800542_f
FJ800542_g
Ferritrophicales Weiss et al. 2007
Ferritrophicaceae Weiss et al. 2007
Ferritrophicum Weiss et al. 2007
Ferrovales Johnson et al. 2014
EF682975_f
EF682975_g
Ferrovaceae Johnson et al. 2014
Ferrovum Johnson et al. 2014
Gallionellales Weiss et al. 2007
Gallionellaceae Henrici and Johnson 1935
AB354610_g
DQ386858_g
Ferrigenium Khalifa et al. 2018
Ferriphaselus Kato et al. 2014
Gallionella Ehrenberg 1838
GU127723_g
GU208442_g
JX047107_g
Nitrotoga Alawi et al. 2007
Sideroxyarcus Kato et al. 2022
GQ396817_o
GQ396817_f
GQ396817_g
JF703372_o
JF703372_f
GQ396925_g
JF703372_g
Methylophilales Garrity et al. 2006
Methylophilaceae Garrity et al. 2006
AJ318162_g
AY569284_g
AY792265_g
AY947974_g
GQ500790_g
HQ116735_g
JCKJ_g
Methylobacillus Yordy and Weaver 1977
Methylophilus Jenkins et al. 1987
Methylopumilus Salcher et al. 2015
Methyloradius Miyadera et al. 2022
Methylotenera Kalyuzhnaya et al. 2006
Methylovorus Govorukhina and Trotsenko 1991
Novimethylophilus Lv et al. 2018
OM43_g
Pseudomethylobacillus Sheu et al. 2019
Nasuia_o
Nasuia_f
AB001520_g
CP021173_g
JF836007_g
Nasuia Noda et al. 2012
Neisseriales Tønjum 2006
Aquella_f
Aquella Chan et al. 2020
DQ984558_g
FJ825812_g
JX040381_g
AY328630_f
AY328630_g
Chitinibacteraceae Chen et al. 2022
Amantichitinum Moß et al. 2013
Andreprevotia Weon et al. 2007
Chitinibacter Chern et al. 2004
Chitinilyticum Chang et al. 2007
Chitiniphilus Sato et al. 2009
Chitinolyticbacter Hao et al. 2011
Deefgea Stackebrandt et al. 2007
Formivibrio Tanaka et al. 1991
Iodobacter Logan 1989
Jeongeupia Yoon et al. 2010
Silvimonas Yang et al. 2005
Chromobacteriaceae Adeolu and Gupta 2013
Aquaspirillum Hylemon et al. 1973
Aquitalea Lau et al. 2006
Chitinimonas Chang et al. 2004
Chitinivorax Chen et al. 2012
Chromobacterium Bergonzini 1880
Crenobacter Dong et al. 2015
Gulbenkiania Vaz-Moreira et al. 2007
Laribacter Yuen et al. 2002
Leeia Lim et al. 2007
Microvirgula Patureau et al. 1998
Paludibacterium Kwon et al. 2008
Procabacter Horn et al. 2002
Pseudogulbenkiania Lin et al. 2008
Rivihabitans Deshmukh and Oren 2023
Vogesella Grimes et al. 1997
HQ674328_f
HQ674328_g
JF830238_g
Neisseriaceae Prévot 1933
AF366267_g
Alysiella Langeron 1923
Aquaspirillum_g2
AY093465_g
Bergeriella Xie and Yokota 2005
Conchiformibius Xie and Yokota 2005
Craterilacuibacter Liu et al. 2020
Eikenella Jackson and Goodman 1972
EU289059_g
FM873692_g
Kingella Henriksen and Bovre 1976
LQXR_g
Neisseria Trevisan 1885
Paralysiella Busse et al. 2021
Simonsiella Schmid 1922
Snodgrassella Kwong and Moran 2013
Stenoxybacter Wertz and Breznak 2008
Uruburuella Vela et al. 2005
Vitreoscilla Pringsheim 1949
Wielerella Kuhnert et al. 2022
Nitrosomonadales Garrity et al. 2006
AB294329_f
AB294329_g
Nitrosomonadaceae Garrity et al. 2006
Nitrosomonas Winogradsky 1892
Nitrosospira Winogradsky and Winogradsky 1933
PAC001907_o
PAC001907_f
DQ297977_g
EF516835_g
HQ450141_g
PAC000153_g
PAC001906_g
PAC001907_g
PAC001921_o
PAC001921_f
AF280846_g
AY532565_g
DQ009366_g
EU735692_g
GQ500755_g
HM243969_g
HQ003485_g
PAC001921_g
PAC002247_g
PAC002583_g
PAC002541_o
EF157089_f
EF157089_g
EF157188_f
EF157188_g
EU281329_f
EU281329_g
Pelomicrobium Slobodkina et al. 2020
PAC002248_f
PAC002248_g
PAC002541_f
AF467301_g
PAC002541_g
Rhodocyclales Garrity et al. 2006
Azonexaceae Boden et al. 2017
Azonexus Reinhold-Hurek and Hurek 2000
Dechloromonas Achenbach et al. 2001
Ferribacterium Cummings et al. 2000
Quatrionicoccus Tindall and Euzéby 2006
Azovibrio_f
Azovibrio Reinhold-Hurek and Hurek 2000
Fluviibacteraceae Watanabe et al. 2020
Fluviibacter Watanabe et al. 2020
Rhodocyclaceae Garrity et al. 2006
Accumulibacter Hesselmann et al. 1999
AF371865_g
AJ009484_g
Azospira Reinhold-Hurek and Hurek 2000
JN038589_g
Oryzomicrobium Liu et al. 2017
Propionivibrio Tanaka et al. 1991
Rhodocyclus Pfennig 1978
Zoogloeaceae Boden et al. 2017
Aromatoleum Rabus et al. 2019
Azoarcus Reinhold-Hurek et al. 1993
Cognatazoarcus Huang et al. 2022
Dactylopiibacterium Ramírez-Puebla et al. 2010
FJ612290_g
Nitrogeniibacter Liao et al. 2021
Niveibacterium Chun et al. 2016
Parazoarcus Huang et al. 2022
Pseudazoarcus Huang et al. 2022
Pseudothauera Huang et al. 2022
Thauera Macy et al. 1993
Uliginosibacterium Weon et al. 2008
Viridibacterium Kang et al. 2017
Zoogloea Itzigsohn 1868
Spirillum_o
Spirillaceae Migula 1894
Spirillum Ehrenberg 1832
Sterolibacterium_o
Sterolibacteriaceae Boden et al. 2017
AB186832_g
AB485760_g
AM490698_g
Denitratisoma Fahrbach et al. 2006
DQ836748_g
DQ836749_g
EF999377_g
Georgfuchsia Weelink et al. 2011
JF833874_g
Methyloversatilis Kalyuzhnaya et al. 2006
Rugosibacter Corteselli et al. 2017
Sterolibacterium Tarlera and Denner 2003
Sulfuricystis Kojima et al. 2022
Sulfurisoma Kojima and Fukui 2014
Sulfuritalea Kojima and Fukui 2011
Sulfuricellales Watanabe et al. 2015
Sulfuricellaceae Watanabe et al. 2015
DQ083112_g
FM174332_g
FN597520_g
Sulfuricella Kojima and Fukui 2010
Sulfuriferula Watanabe et al. 2015
Sulfurimicrobium Kojima et al. 2021
Sulfurirhabdus Watanabe et al. 2016
Thiobacillus_o
Thiobacillaceae Boden et al. 2017
AB240520_g
Annwoodia Boden et al. 2017
FJ437813_g
Parasulfuritortus Xie et al. 2021
Sulfuritortus Kojima et al. 2017
Thiobacillus Beijerinck 1904
U46750_g
Usitatibacter_o
EF019596_f
EF019596_g
EU244049_f
EU244049_g
FR749809_f
FR749809_g
Usitatibacteraceae Vieira et al. 2021
AB552866_g
CP012157_g
DQ450770_g
Usitatibacter Vieira et al. 2021
Vidania_o
Vidania_f
Vidania Gonella et al. 2011
Zinderia_o
Zinderia_f
Zinderia McCutcheon and Moran 2010
Data type count
  • 0
    Genome
  • 0
    16S rRNA