Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria;Epsilonproteobacteria
Campylobacterales Garrity et al. 2006
AF458287_f
AF458287_g
AF458287_s
AJ576349_f
AJ576349_g
AB231076_s
AB234540_s
AJ576349_s
AKKQ_f
AKKQ_g
AKKQ_s
DQ295692_g
DQ295692_s
FJ165502_s
Arcobacteraceae Waite et al. 2020
AB243994_g
AB243994_s
AY570594_s
Aliarcobacter Pérez-Cataluña et al. 2020
AB234539_s
Aliarcobacter butzleri (Kiehlbauch et al. 1991) Pérez-Cataluña et al. 2020
Aliarcobacter cibarius (Houf et al. 2005) Pérez-Cataluña et al. 2020
Aliarcobacter cryaerophilus (Neill et al. 1985) Pérez-Cataluña et al. 2020
Aliarcobacter faecis (Whiteduck-Léveillée et al. 2019) Pérez-Cataluña et al. 2020
Aliarcobacter lanthieri (Whiteduck-Léveillée et al. 2015) Pérez-Cataluña et al. 2020
Aliarcobacter skirrowii (Vandamme et al. 1992) Pérez-Cataluña et al. 2020
Aliarcobacter thereius (Houf et al. 2009) Pérez-Cataluña et al. 2020
Aliarcobacter trophiarum (De Smet et al. 2011) Pérez-Cataluña et al. 2020
Aliarcobacter vitoriensis Alonso et al. 2021
AM084124_s
Arcobacter lacus Pérez-Cataluña et al. 2019
Arcobacter porcinus Figueras et al. 2017
LRUV_s
Arcobacter Vandamme et al. 1991
AB189374_s
AB530236_s
AJ132732_s
Arcobacter nitrofigilis (McClung et al. 1983) Vandamme et al. 1991
Arcobacter sulfidicus Wirsen et al. 2002
Arcobacter vandammei Kerkhof et al. 2021
AY225610_s
AY548997_s
AY922188_s
D83061_s
DQ218324_s
EF688595_s
EU265800_s
EU570841_s
FR666870_s
FR666871_s
GQ261829_s
GQ349386_s
GQ357014_s
HM057704_s
HM057725_s
HQ729111_s
JF344171_s
JN662269_s
JQ611225_s
JQ712382_s
JQ712383_s
JQ712391_s
JQ712417_s
JQ712419_s
JX391518_s
JX570598_s
JX570599_s
BDIR_g
Arcobacter roscoffensis Pascual et al. 2023
BDIR_s
EF645952_s
EU052236_s
FJ717164_s
PAC001196_s
PAC001197_s
DQ234177_g
DQ234177_s
EU101150_s
EU234123_g
CP041403_s
EU234123_s
GQ844394_s
Halarcobacter Pérez-Cataluña et al. 2019
AB496655_s
AF235116_s
EU052247_s
EU052255_s
Halarcobacter anaerophilus (Sasi Jyothsna et al. 2013) Pérez-Cataluña et al. 2020
Halarcobacter arenosus Baek et al. 2021
Halarcobacter bivalviorum (Levican et al. 2012) Pérez-Cataluña et al. 2019
Halarcobacter ebronensis (Levican et al. 2015) Pérez-Cataluña et al. 2019
NXIE_s
PAC001014_s
PDKE_s
PDKF_s
Malaciobacter Pérez-Cataluña et al. 2019
EF648116_s
HQ203798_s
Malaciobacter canalis (Pérez-Cataluña et al. 2018) Pérez-Cataluña et al. 2019
Malaciobacter halophilus (Donachie et al. 2005) Pérez-Cataluña et al. 2019
Malaciobacter marinus (Kim et al. 2010) Pérez-Cataluña et al. 2019
Malaciobacter molluscorum (Figueras et al. 2011) Pérez-Cataluña et al. 2019
Malaciobacter mytili (Collado et al. 2009) Pérez-Cataluña et al. 2019
Malaciobacter pacificus (Zhang et al. 2016) Pérez-Cataluña et al. 2019
PAC001022_s
PDKC_s
PDKG_s
PDKN_s
PAC002649_g
PAC002649_s
Poseidonibacter Pérez-Cataluña et al. 2019
AB015256_s
AB015529_s
AJ271653_s
AJ271654_s
AY548986_s
DQ514311_s
EU236320_s
EU573099_s
EU617862_s
FN773273_s
HM591472_s
HQ203942_s
HQ203977_s
JX016634_s
Poseidonibacter antarcticus Guo et al. 2019
Poseidonibacter lekithochrous (Diéguez et al. 2017) Pérez-Cataluña et al. 2019
Poseidonibacter parvus Kim et al. 2021
WFKI_s
Pseudarcobacter Pérez-Cataluña et al. 2019
Arcobacter acticola Park et al. 2019
Arcobacter caeni Pérez-Cataluña et al. 2019
Pseudarcobacter aquimarinus (Levican et al. 2015) Pérez-Cataluña et al. 2019
Pseudarcobacter cloacae (Levican et al. 2013) Pérez-Cataluña et al. 2019
Pseudarcobacter defluvii (Collado et al. 2011) Pérez-Cataluña et al. 2019
Pseudarcobacter ellisii (Figueras et al. 2011) Pérez-Cataluña et al. 2019
Pseudarcobacter suis (Levican et al. 2013) Pérez-Cataluña et al. 2019
Pseudarcobacter venerupis (Levican et al. 2012) Pérez-Cataluña et al. 2019
AY280383_f
AY280383_g
AY280383_s
AY531573_f
AY531573_g
AF068786_s
AJ431213_s
AJ969446_s
AY251062_s
AY531573_s
AY531589_s
AY672540_s
AY766315_s
EF462722_s
EF462831_s
EU555135_s
JN662167_s
JQ611089_s
JQ611125_s
JQ611146_s
JQ611152_s
JQ712449_s
AY531598_f
AY531598_g
AY280411_s
AY327877_s
AY531580_s
AY531598_s
AY531606_s
AY672503_s
AY672510_s
DQ925875_s
EU555139_s
FJ640809_s
FJ640817_s
HQ153961_s
JF738103_s
JN662103_s
JN662114_s
JN662287_s
JN662292_s
JQ072971_s
JQ287068_s
JQ611158_s
JQ712443_s
AY571498_f
AY571498_g
AB089111_s
AB198587_s
AB231075_s
AY571498_s
HM008285_s
AY672534_f
AY672534_g
AY672534_s
Campylobacteraceae Vandamme and De Ley 1991
Campylobacter Sebald and Veron 1963
AJ276874_s
AMZQ_s
ANGV_s
ANNF_s
ANNG_s
ANNI_s
AY005038_s
AY554142_s
Campylobacter anatolicus Aydin et al. 2021
Campylobacter armoricus Boukerb et al. 2019
Campylobacter aviculae Bryant et al. 2021
Campylobacter avium Rossi et al. 2009
Campylobacter bilis Phung et al. 2022
Campylobacter blaseri Gilbert et al. 2018
Campylobacter canadensis Inglis et al. 2007
Campylobacter coli (Doyle 1948) Veron and Chatelain 1973
Campylobacter concisus Tanner et al. 1981
Campylobacter corcagiensis Koziel et al. 2014
Campylobacter cuniculorum Zanoni et al. 2009
Campylobacter curvus (Tanner et al. 1984) Vandamme et al. 1991
Campylobacter estrildidarum Bryant et al. 2021
Campylobacter felis Wang et al. 2023
Campylobacter fetus (Smith and Taylor 1919) Sebald and Véron 1963
Campylobacter geochelonis Piccirillo et al. 2016
Campylobacter gracilis (Tanner et al. 1981) Vandamme et al. 1995
Campylobacter helveticus Stanley et al. 1993
Campylobacter hepaticus Van et al. 2016
Campylobacter hominis Lawson et al. 2001
Campylobacter hyointestinalis Gebhardt et al. 1985
Campylobacter iguaniorum Gilbert et al. 2015
Campylobacter insulaenigrae Foster et al. 2004
Campylobacter jejuni (Jones et al. 1931) Veron and Chatelain 1973
Campylobacter lanienae Logan et al. 2000
Campylobacter lari Benjamin et al. 1984
Campylobacter majalis Lynch et al. 2022
Campylobacter mucosalis (Lawson et al. 1981) Roop et al. 1985
Campylobacter novaezeelandiae Bloomfield et al. 2020
Campylobacter ornithocola Cáceres et al. 2017
Campylobacter ovis Wang et al. 2023
Campylobacter peloridis Debruyne et al. 2009
Campylobacter pinnipediorum Gilbert et al. 2017
Campylobacter portucalensis Silva et al. 2021
Campylobacter rectus (Tanner et al. 1981) Vandamme et al. 1991
Campylobacter showae Etoh et al. 1993
Campylobacter sputorum (Prévot 1940) Véron and Chatelain 1973
Campylobacter subantarcticus Debruyne et al. 2010
Campylobacter suis Lynch et al. 2022
Campylobacter taeniopygiae Bryant et al. 2021
Campylobacter troglodytis Kaur et al. 2023
Campylobacter upsaliensis Sandstedt and Ursing 1991
Campylobacter ureolyticus (Jackson and Goodman 1978) Vandamme et al. 2010
Campylobacter volucris Debruyne et al. 2010
Campylobacter vulpis Parisi et al. 2021
CM000855_s
CP000792_s
CP007769_s
CP007775_s
CP012545_s
CP012552_s
CP018788_s
CP018789_s
CP019685_s
CP049075_s
CP053845_s
EU289065_s
EU344611_s
EU470464_s
GQ134258_s
GQ451185_s
GU303058_s
HG326877_s
HM211851_s
JH414887_s
JN713450_s
KE340326_s
LVLC_s
LVWL_s
LVXF_s
NDYO_s
NDYP_s
NDYT_s
NFNY_s
NREN_s
NXLK_s
QHLJ_s
QHLK_s
RYYL_s
SMTT_s
UWOJ_s
UWOK_s
DQ228643_f
DQ228643_g
DQ228643_s
EF462604_f
EF462604_g
EF462604_s
EF462717_s
FM994668_f
FM994668_g
DQ917867_s
FM994668_s
FN600361_s
GU117992_s
JX570595_s
Helicobacteraceae Garrity et al. 2006
Helicobacter Goodwin et al. 1989
AY554116_s
AY554124_s
AY554131_s
AY554135_s
AY554141_s
CP002336_s
CP003479_s
FZMR_s
FZQY_s
Helicobacter acinonychis Eaton et al. 1993
Helicobacter ailurogastricus Joosten et al. 2017
Helicobacter anatolicus Aydin et al. 2023
Helicobacter anseris Fox et al. 2006
Helicobacter apodemus Jeon et al. 2015
Helicobacter apri Zanoni et al. 2016
Helicobacter aurati Patterson et al. 2002
Helicobacter baculiformis Baele et al. 2008
Helicobacter bilis Fox et al. 1997
Helicobacter bizzozeronii Hänninen et al. 1996
Helicobacter bovis De Groote et al. 1999
Helicobacter brantae Fox et al. 2006
Helicobacter burdigaliensis Berthenet et al. 2019
Helicobacter canadensis Fox et al. 2002
Helicobacter canicola Kawamura et al. 2016
Helicobacter canis Stanley et al. 1994
Helicobacter cetorum Harper et al. 2006
Helicobacter cholecystus Franklin et al. 1997
Helicobacter cinaedi (Totten et al. 1988) Vandamme et al. 1991
Helicobacter colisuis Gruntar et al. 2022
Helicobacter cynogastricus Van den Bulck et al. 2006
Helicobacter delphinicola Segawa et al. 2021
Helicobacter didelphidarum Shen et al. 2020
Helicobacter enhydrae Shen et al. 2020
Helicobacter equorum Moyaert et al. 2007
Helicobacter felis Paster et al. 1991
Helicobacter fennelliae (Totten et al. 1988) Vandamme et al. 1991
Helicobacter ganmani Robertson et al. 2001
Helicobacter heilmannii Smet et al. 2012
Helicobacter hepaticus Fox et al. 1994
Helicobacter himalayensis Hu et al. 2015
Helicobacter jaachi Shen et al. 2017
Helicobacter japonicus Shen et al. 2017
Helicobacter kayseriensis Aydin et al. 2022
Helicobacter kumamotonensis Kawamura et al. 2023
Helicobacter labacensis Gruntar et al. 2020
Helicobacter labetoulli Berthenet et al. 2019
Helicobacter macacae Fox et al. 2013
Helicobacter marmotae Fox et al. 2006
Helicobacter mastomyrinus Shen et al. 2006
Helicobacter mehlei Gruntar et al. 2020
Helicobacter mesocricetorum Simmons et al. 2000
Helicobacter monodelphidis Shen et al. 2020
Helicobacter muricola Won et al. 2002
Helicobacter muridarum Lee et al. 1992
Helicobacter mustelae (Fox et al. 1988) Goodwin et al. 1989
Helicobacter pametensis Dewhirst et al. 1994
Helicobacter pullorum Stanley et al. 1995
Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989
Helicobacter rodentium Shen et al. 1997
Helicobacter saguini Shen et al. 2017
Helicobacter salomonis Jalava et al. 1997
Helicobacter suis Baele et al. 2008
Helicobacter trogontum Mendes et al. 1996
Helicobacter turcicus Aydin et al. 2022
Helicobacter typhlonius Franklin et al. 2002
Helicobacter valdiviensis Collado et al. 2014
Helicobacter vulpis Gruntar et al. 2020
Helicobacter winghamensis Melito et al. 2001
JROZ_s
JRPA_s
JRPB_s
JRPE_s
MLAM_s
MLAN_s
MLAO_s
MLAP_s
MLAQ_s
MLAR_s
MLAS_s
MLAT_s
MLQN_s
NESU_s
NHYM_s
Wolinella Tanner et al. 1981
JN713338_s
Wolinella succinogenes (Wolin et al. 1961) Tanner et al. 1981
Hydrogenimonaceae
Hydrogenimonas Takai et al. 2004
AB278149_s
AB518744_s
AF367486_s
AF420342_s
DQ228655_s
EF218995_s
FJ535322_s
FJ535353_s
Hydrogenimonas thermophila Takai et al. 2004
Hydrogenimonas urashimensis Mino et al. 2021
JF747790_f
DQ295647_g
DQ295647_s
DQ676376_g
DQ676376_s
HM184977_g
HM184977_s
JF747790_g
AB478681_s
EU662525_s
GQ354893_s
GU196222_s
HM481400_s
JF747790_s
L35521_f
L35521_g
EF462782_s
L35521_s
L35522_s
Nitratiruptoraceae Waite et al. 2020
Nitratiruptor Nakagawa et al. 2005
AP009178_s
EF462830_s
FJ535294_s
JF320742_s
JQ073001_s
Nitratiruptor tergarcus Nakagawa et al. 2005
Nitrosophilus Shiotani et al. 2021
Nitrosophilus alvini Shiotani et al. 2021
Nitrosophilus kaiyonis Fukazawa et al. 2023
Nitrosophilus labii (Fukushi et al. 2021) Shiotani et al. 2021
PAC001537_f
PAC001537_g
PAC001537_s
Sulfurimonadaceae Waite et al. 2020
EU245507_g
EU245507_s
EU491826_g
AY225611_s
AY922185_s
EF379628_s
EU491826_s
FJ535347_s
FM242221_s
GU369904_s
JN874070_s
JQ586308_s
EU652650_g
EU652650_s
FJ205271_s
FJ497269_s
GQ261792_s
JQ586310_s
Sulfuricurvum Kodama and Watanabe 2004
CP003920_s
EU542457_s
EU884105_s
EU884110_s
FR691499_s
SLTI_s
Sulfuricurvum kujiense Kodama and Watanabe 2004
Sulfurimonas Inagaki et al. 2003
AB013263_s
AB015257_s
AB176109_s
AB176115_s
AB188787_s
AB189362_s
AB189712_s
AB193949_s
AB235233_s
AB294337_s
AB301716_s
AB478650_s
AF121884_s
AF367490_s
AF458288_s
AJ441198_s
AJ441199_s
AJ515713_s
AJ810529_s
AM889185_s
AM982624_s
AY211683_s
AY216438_s
AY218555_s
AY225613_s
AY532570_s
DQ228648_s
DQ228650_s
DQ228651_s
DQ234141_s
DQ234251_s
DQ676341_s
DQ676368_s
DQ836759_s
DQ890422_s
DQ890434_s
EF218991_s
EF999352_s
EU487983_s
EU555128_s
FJ037619_s
FJ205272_s
FJ437877_s
FJ437918_s
FJ497453_s
FJ497608_s
FJ497618_s
FJ497630_s
FJ535288_s
FJ535316_s
FJ535349_s
FJ624443_s
FJ717077_s
FJ717092_s
FM174328_s
FN562873_s
GQ136484_s
GQ903358_s
GU120613_s
GU145530_s
GU291329_s
GU291330_s
GU291331_s
GU291332_s
GU291334_s
GU437564_s
GU437581_s
GU583978_s
GU583983_s
HM057666_s
HM481300_s
HQ153998_s
HQ729095_s
JN637788_s
JN662039_s
JN873929_s
JN873940_s
JN874235_s
JN874362_s
JQ287031_s
JQ287433_s
JQ287478_s
JQ287491_s
JQ586334_s
JQ611149_s
JQ611222_s
JQ712116_s
JQ712379_s
JQ712385_s
JQ712411_s
JQ712432_s
JQ712447_s
JQ723681_s
JX898129_s
KC009867_s
PAC002647_s
Sulfurimonas aquatica Kojima et al. 2023
Sulfurimonas autotrophica Inagaki et al. 2003
Sulfurimonas baltica Henkel et al. 2021
Sulfurimonas crateris Ratnikova et al. 2020
Sulfurimonas denitrificans (Timmer-ten Hoor 1975) Takai et al. 2006
Sulfurimonas gotlandica Labrenz et al. 2013
Sulfurimonas hongkongensis Cai et al. 2014
Sulfurimonas hydrogeniphila Wang et al. 2021
Sulfurimonas indica Hu et al. 2021
Sulfurimonas lithotrophica Wang et al. 2020
Sulfurimonas marina Wang et al. 2022
Sulfurimonas marisnigri Henkel et al. 2021
Sulfurimonas paralvinellae Takai et al. 2006
Sulfurimonas sediminis Wang et al. 2021
Sulfurimonas xiamenensis Wang et al. 2020
U15106_s
Sulfurospirillaceae Waite et al. 2020
AY280408_g
AY280408_s
JQ286985_s
EF462744_g
EF462744_s
Sulfurospirillum Schumacher et al. 1993
AB546014_s
AB550501_s
AF357198_s
AF513952_s
AM157656_s
AP014723_s
AY211681_s
CP021416_s
DQ228579_s
FJ535312_s
FJ814746_s
GQ133407_s
GU220754_s
Sulfurospirillum alkalitolerans Sorokin et al. 2013
Sulfurospirillum arcachonense Finster et al. 1997
Sulfurospirillum arsenophilum Stolz et al. 1999
Sulfurospirillum barnesii Stolz et al. 1999
Sulfurospirillum carboxydovorans Jensen and Finster 2005
Sulfurospirillum cavolei Kodama et al. 2007
Sulfurospirillum deleyianum Schumacher et al. 1993
Sulfurospirillum diekertiae Jin et al. 2023
Sulfurospirillum halorespirans Luijten et al. 2003
Sulfurospirillum multivorans (Scholz-Muramatsu et al. 2002) Luijten et al. 2003
Sulfurospirillum oryzae Xie et al. 2023
Thiofractor Makita et al. 2012
AY251060_s
JQ287347_s
Thiofractor thiocaminus Makita et al. 2012
Sulfurovaceae Waite et al. 2020
Nitratifractor Nakagawa et al. 2005
AJ431215_s
AJ431216_s
AJ441202_s
FJ535298_s
FJ535310_s
Nitratifractor salsuginis Nakagawa et al. 2005
Sulfurovum Inagaki et al. 2004
AB013261_s
AB015535_s
AB175511_s
AB188786_s
AB193950_s
AB239758_s
AB278148_s
AB278150_s
AB425208_s
AB476188_s
AF029044_s
AF121887_s
AF420343_s
AF420351_s
AF420358_s
AF420360_s
AF449234_s
AJ431223_s
AJ441209_s
AJ515715_s
AJ576001_s
AM745162_s
AP009179_s
AQWF_s
AY280380_s
AY280381_s
AY280405_s
AY531568_s
AY531570_s
AY531571_s
AY531585_s
AY531593_s
AY531596_s
AY531599_s
AY531601_s
AY672499_s
AY672507_s
AY672511_s
AY672512_s
AY672515_s
AY672516_s
AY672518_s
AY672521_s
AY672530_s
AY672533_s
AY766318_s
AY766319_s
DQ295652_s
DQ295653_s
DQ295654_s
DQ295657_s
DQ394923_s
DQ415771_s
DQ925894_s
EF061977_s
EF061978_s
EF061979_s
EF462643_s
EF462670_s
EF462674_s
EF462691_s
EF462757_s
EF467446_s
EF467592_s
EU101149_s
EU107476_s
EU234097_s
EU265785_s
EU265786_s
EU265793_s
EU487914_s
EU574676_s
EU662341_s
FJ001798_s
FJ189562_s
FJ535263_s
FJ535281_s
FN553937_s
FN562850_s
FN562852_s
FN658697_s
GQ354903_s
GQ355011_s
GQ355046_s
GQ355070_s
GU369897_s
GU390795_s
HM591450_s
HQ153847_s
HQ153979_s
HQ203755_s
HQ588379_s
JN255992_s
JN255999_s
JN256002_s
JN662050_s
JN662149_s
JN662200_s
JN662244_s
JN662280_s
JN662308_s
JN662309_s
JN874000_s
JN874132_s
JN874140_s
JN874168_s
JN874207_s
JN874295_s
JQ072951_s
JQ611092_s
JQ611136_s
JQ611145_s
JQ712400_s
JQ712408_s
JQ712412_s
JQ996645_s
JQ996690_s
L35520_s
Sulfurovum aggregans Mino et al. 2014
Sulfurovum denitrificans Mori et al. 2018
Sulfurovum indicum Xie et al. 2021
Sulfurovum lithotrophicum Inagaki et al. 2004
Sulfurovum riftiae Giovannelli et al. 2016
Data type count
  • 0
    Genome
  • 0
    16S rRNA