Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Actinobacteria;Actinomycetia
Dermatophilales Salam et al. 2020
Arsenicicoccaceae Salam et al. 2020
Arsenicicoccus Collins et al. 2004
Arsenicicoccus bolidensis Collins et al. 2004
Arsenicicoccus cauae Kweon et al. 2022
Arsenicicoccus dermatophilus Gobeli et al. 2013
Arsenicicoccus piscis Hamada et al. 2010
CP012070_s
Dermacoccaceae Schumann and Stackebrandt 2000
Allobranchiibius Ai et al. 2017
Allobranchiibius huperziae Ai et al. 2017
Barrientosiimonas Lee et al. 2013
Barrientosiimonas endolithica Parag et al. 2015
Barrientosiimonas humi Lee et al. 2013
Barrientosiimonas marina (Lee 2013) Parag et al. 2015
Branchiibius Sugimoto et al. 2011
Branchiibius cervicis Tomida et al. 2013
Branchiibius hedensis Sugimoto et al. 2011
Calidifontibacter Ruckmani et al. 2011
Calidifontibacter indicus Ruckmani et al. 2011
Calidifontibacter terrae Dahal et al. 2017
JF175550_s
Demetria Groth et al. 1997
Demetria terragena Groth et al. 1997
Dermacoccus Stackebrandt et al. 1995
Dermacoccus abyssi Pathom-aree et al. 2006
Dermacoccus barathri Pathom-aree et al. 2006
Dermacoccus nishinomiyaensis (Oda 1935) Stackebrandt et al. 1995
Dermacoccus profundi Pathom-aree et al. 2006
JQ045820_s
Flexivirga Anzai et al. 2012
Flexivirga aerilata Chaudhary et al. 2021
Flexivirga alba Anzai et al. 2012
Flexivirga caeni Keum et al. 2020
Flexivirga endophytica Gao et al. 2016
Flexivirga lutea Kang et al. 2016
Flexivirga oryzae Hyeon et al. 2017
HQ418230_s
Leekyejoonella Lee et al. 2020
Leekyejoonella antrihumi Lee et al. 2020
Luteipulveratus Ara et al. 2010
Luteipulveratus halotolerans Juboi et al. 2015
Luteipulveratus mongoliensis Ara et al. 2010
Metallococcus Lim et al. 2021
Metallococcus carri Lim et al. 2021
Rudaeicoccus Kim et al. 2013
Rudaeicoccus suwonensis Kim et al. 2013
Yimella Tang et al. 2010
Yimella lutea Tang et al. 2010
Yimella radicis Yang et al. 2016
Dermatophilaceae Austwick 1958
Agilicoccus Yin et al. 2021
Agilicoccus flavus Yin et al. 2021
Austwickia Hamada et al. 2011
Austwickia chelonae (Masters et al. 1995) Hamada et al. 2011
CP031447_s
Dermatophilus (Van Saceghem 1915) Gordon 1964
Dermatophilus congolensis (Van Saceghem 1915) Gordon 1964
Gephyromycinifex Zhu et al. 2021
Gephyromycinifex aptenodytis Zhu et al. 2021
Kineosphaera Liu et al. 2002
Kineosphaera limosa Liu et al. 2002
Kineosphaera nakaumiensis Yamada et al. 2013
Mobilicoccus Hamada et al. 2011
Mobilicoccus caccae Chen et al. 2017
Mobilicoccus massiliensis Mathlouthi et al. 2017
Mobilicoccus pelagius Hamada et al. 2011
Piscicoccus Hamada et al. 2011
Piscicoccus intestinalis Hamada et al. 2011
Tonsilliphilus Azuma et al. 2013
Tonsilliphilus suis Azuma et al. 2013
Intrasporangiaceae Rainey et al. 1997
Fodinibacter Wang et al. 2009
Fodinibacter luteus Wang et al. 2009
Humibacillus Kageyama et al. 2008
FN550128_s
Humibacillus xanthopallidus Kageyama et al. 2008
MAST_s
Intrasporangium Kalakoutskii et al. 1967
Intrasporangium calvum Kalakoutskii et al. 1967
Intrasporangium chromatireducens Liu et al. 2012
Intrasporangium flavum (Azman et al. 2016) Nouioui et al. 2018
Intrasporangium mesophilum Yang et al. 2012
Intrasporangium oryzae (Kageyama et al. 2007) Yang et al. 2012
Janibacter Martin et al. 1997
CP036164_s
Janibacter alkaliphilus Li et al. 2012
Janibacter anophelis Kämpfer et al. 2006
Janibacter corallicola Kageyama et al. 2007
Janibacter cremeus Hamada et al. 2013
Janibacter endophyticus Zhang et al. 2022
Janibacter hoylei Shivaji et al. 2009
Janibacter indicus Zhang et al. 2014
Janibacter limosus Martin et al. 1997
Janibacter massiliensis Maaloum et al. 2019
Janibacter melonis Yoon et al. 2004
Janibacter terrae Yoon et al. 2000
LMRZ_s
Knoellia Groth et al. 2002
AAMN_s
Knoellia aerolata Weon et al. 2007
Knoellia flava Yu et al. 2012
Knoellia locipacati Shin et al. 2012
Knoellia remsis (Osman et al. 2007) Nouioui et al. 2018
Knoellia sinensis Groth et al. 2002
Knoellia subterranea Groth et al. 2002
LMSA_s
Kribbia Jung et al. 2006
Kribbia dieselivorans Jung et al. 2006
Lapillicoccus Lee and Lee 2007
Lapillicoccus jejuensis Lee and Lee 2007
Marihabitans Kageyama et al. 2008
Marihabitans asiaticum Kageyama et al. 2008
Ornithinibacter Xiao et al. 2011
HM773491_s
Ornithinibacter aureus Xiao et al. 2011
Ornithinicoccus Groth et al. 1999
JF028612_s
Ornithinicoccus halotolerans Zhang et al. 2016
Ornithinicoccus hortensis Groth et al. 1999
Oryzihumus Kageyama et al. 2005
EU644104_s
JX098377_s
Oryzihumus leptocrescens Kageyama et al. 2005
Oryzihumus soli Kim et al. 2017
Oryzihumus terrae Lim et al. 2014
Oryzobacter Kim et al. 2015
Oryzobacter terrae Kim et al. 2015
Pedococcus Nouioui et al. 2018
Pedococcus aerophilus (Weon et al. 2008) Nouioui et al. 2018
Pedococcus badiiscoriae (Lee 2013) Nouioui et al. 2018
Pedococcus bigeumensis (Dastager et al. 2008) Nouioui et al. 2018
Pedococcus cremeus (Zhang et al. 2011) Nouioui et al. 2018
Pedococcus dokdonensis (Yoon et al. 2008) Nouioui et al. 2018
Pedococcus ginsenosidimutans (Wang et al. 2011) Nouioui et al. 2018
Pedococcus soli (Singh et al. 2015) Nouioui et al. 2018
Phycicoccus ginsengisoli Kang et al. 2016
Phycicoccus ochangensis Kim et al. 2012
Phycicoccus Lee 2006
CP053707_s
LMSE_s
Phycicoccus avicenniae Chen et al. 2022
Phycicoccus duodecadis (Lochhead 1958) Nouioui et al. 2018
Phycicoccus elongatus (Hanada et al. 2002) Nouioui et al. 2018
Phycicoccus endophyticus Liu et al. 2016
Phycicoccus flavus Chen et al. 2021
Phycicoccus jejuensis Lee 2006
Phycicoccus mangrovi Chen et al. 2021
Segeticoccus Lee and Whang 2020
Ornithinicoccus soli Jiang et al. 2020
Segeticoccus rhizosphaerae Lee and Whang 2020
Terrabacter Collins et al. 1989
Terrabacter aeriphilus Weon et al. 2010
Terrabacter aerolatus Weon et al. 2007
Terrabacter carboxydivorans Kim et al. 2011
Terrabacter ginsengisoli Jin et al. 2019
Terrabacter ginsenosidimutans An et al. 2011
Terrabacter koreensis Won et al. 2014
Terrabacter lapilli Lee et al. 2008
Terrabacter terrae Montero-Barrientos et al. 2005
Terrabacter terrigena Yoon et al. 2009
Terrabacter tumescens (Jensen 1934) Collins et al. 1989
Terracoccus Prauser et al. 1997
Terracoccus luteus Prauser et al. 1997
Tetrasphaera Maszenan et al. 2000
AM982647_s
CU919686_s
Tetrasphaera australiensis Maszenan et al. 2000
Tetrasphaera japonica Maszenan et al. 2000
Tetrasphaera jenkinsii McKenzie et al. 2006
Tetrasphaera vanveenii McKenzie et al. 2006
Tetrasphaera veronensis McKenzie et al. 2006
WESE_s
Kytococcaceae Nouioui et al. 2018
Kytococcus Stackebrandt et al. 1995
Kytococcus aerolatus Kämpfer et al. 2009
Kytococcus schroeteri Becker et al. 2002
Kytococcus sedentarius (ZoBell and Upham 1944) Stackebrandt et al. 1995
Ornithinimicrobiaceae Nouioui et al. 2018
AM746693_g
AM746693_s
Ornithinimicrobium Groth et al. 2001
CP036403_s
HQ749809_s
HQ750106_s
JF178857_s
Ornithinimicrobium algicola Ramaprasad et al. 2015
Ornithinimicrobium avium Lee et al. 2022
Ornithinimicrobium cavernae Zhang et al. 2019
Ornithinimicrobium cerasi Fang et al. 2020
Ornithinimicrobium ciconiae Lee et al. 2022
Ornithinimicrobium cryptoxanthini Huang et al. 2023
Ornithinimicrobium flavum Fang et al. 2017
Ornithinimicrobium humiphilum Groth et al. 2001
Ornithinimicrobium kibberense Mayilraj et al. 2006
Ornithinimicrobium laminariae Cao et al. 2022
Ornithinimicrobium murale Kämpfer et al. 2013
Ornithinimicrobium panacihumi Huo et al. 2021
Ornithinimicrobium pekingense Liu et al. 2008
Ornithinimicrobium pratense Guo et al. 2020
Ornithinimicrobium sediminis Gao et al. 2022
Ornithinimicrobium tianjinense Liu et al. 2013
Serinicoccus Yi et al. 2004
LQBL_s
Serinicoccus chungangensis Traiwan et al. 2011
Serinicoccus hydrothermalis Zhang et al. 2020
Serinicoccus kebangsaanensis Yusof et al. 2022
Serinicoccus marinus Yi et al. 2004
Serinicoccus profundi Xiao et al. 2011
Serinicoccus sediminis Lee et al. 2019
Data type count
  • 0
    Genome
  • 0
    16S rRNA