Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Lysobacterales Christensen and Cook 1978
Lysobacteraceae Christensen and Cook 1978
Arenimonas Kwon et al. 2007
Arenimonas aestuarii Jeong et al. 2016
Arenimonas alkanexedens Zhu et al. 2019
Arenimonas aquatica Kim et al. 2012
Arenimonas caeni Liu et al. 2018
Arenimonas composti (Jin et al. 2007) Aslam et al. 2009
Arenimonas daechungensis Huy et al. 2013
Arenimonas daejeonensis Jin et al. 2012
Arenimonas donghaensis Kwon et al. 2007
Arenimonas fontis Zayulina et al. 2020
Arenimonas halophila Kanjanasuntree et al. 2018
Arenimonas malthae Young et al. 2007
Arenimonas maotaiensis Yuan et al. 2014
Arenimonas metalli Chen et al. 2012
Arenimonas oryziterrae Aslam et al. 2009
Arenimonas soli Xu et al. 2017
Arenimonas subflava Makk et al. 2015
Arenimonas taoyuanensis Zhang et al. 2016
Arenimonas terrae Han et al. 2020
Chiayiivirga Hsu et al. 2013
Chiayiivirga flava Hsu et al. 2013
Chujaibacter Kim et al. 2015
Chujaibacter soli Kim et al. 2015
Coralloluteibacterium Chen et al. 2018
Denitratimonas Han et al. 2016
Denitratimonas tolerans Han et al. 2016
Luteimonas Finkmann et al. 2000
Luteimonas abyssi Fan et al. 2014
Luteimonas aestuarii Roh et al. 2009
Luteimonas aquatica Chou et al. 2008
Luteimonas arsenica Mu et al. 2016
Luteimonas cellulosilyticus Lin et al. 2020
Luteimonas chenhongjianii Zhang et al. 2020
Luteimonas colneyensis Gilroy et al. 2021
Luteimonas composti Young et al. 2007
Luteimonas cucumeris Sun et al. 2012
Luteimonas dalianensis Xin et al. 2014
Luteimonas deserti Huang et al. 2021
Luteimonas fraxinea Ulrich et al. 2023
Luteimonas galliterrae Shen et al. 2023
Luteimonas gilva Xiong et al. 2020
Luteimonas granuli Siddiqi et al. 2020
Luteimonas huabeiensis Wu et al. 2013
Luteimonas lumbrici Cha et al. 2020
Luteimonas lutimaris Park et al. 2011
Luteimonas marina Baik et al. 2008
Luteimonas mephitis Finkmann et al. 2000
Luteimonas notoginsengisoli Cheng et al. 2016
Luteimonas padinae Verma et al. 2016
Luteimonas panaciterrae (Ten et al. 2009) Jin et al. 2020
Luteimonas rhizosphaerae Zhao et al. 2018
Luteimonas salinisoli Sun et al. 2022
Luteimonas saliphila Sun et al. 2022
Luteimonas soli Wang et al. 2015
Luteimonas terrae Ngo and Yin 2016
Luteimonas terricola Zhang et al. 2010
Luteimonas vadosa Romanenko et al. 2013
Luteimonas viscosa Chen et al. 2022
Luteimonas weifangensis Zhang et al. 2020
Luteimonas wenzhouensis Zhou et al. 2021
Luteimonas yindakuii Zhang et al. 2020
Lysobacter Christensen and Cook 1978
Luteimonas pelagia Lin et al. 2016
Lysobacter aestuarii Jeong et al. 2016
Lysobacter agri Singh et al. 2015
Lysobacter alkalisoli Xu et al. 2020
Lysobacter antarcticus Liu et al. 2022
Lysobacter antibioticus Christensen and Cook 1978
Lysobacter arenosi Kim et al. 2021
Lysobacter auxotrophicus Saito et al. 2023
Lysobacter avium Lee et al. 2022
Lysobacter brunescens Christensen and Cook 1978
Lysobacter bugurensis Zhang et al. 2011
Lysobacter caeni Ye et al. 2015
Lysobacter capsici Park et al. 2008
Lysobacter caseinilyticus Chhetri et al. 2020
Lysobacter cavernae Chen et al. 2016
Lysobacter chengduensis Wen et al. 2016
Lysobacter chinensis Liu et al. 2022
Lysobacter ciconiae Lee et al. 2022
Lysobacter concretionis Bae et al. 2005
Lysobacter daecheongensis Ten et al. 2008
Lysobacter daejeonensis Weon et al. 2006
Lysobacter defluvii Yassin et al. 2007
Lysobacter dokdonensis Oh et al. 2011
Lysobacter enzymogenes Christensen and Cook 1978
Lysobacter firmicutimachus Miess et al. 2016
Lysobacter fragariae Singh et al. 2015
Lysobacter gilvus Xu et al. 2021
Lysobacter ginsengisoli Jung et al. 2011
Lysobacter gummosus Christensen and Cook 1978
Lysobacter hankyongensis Siddiqi and Im 2016
Lysobacter helvus Kim et al. 2019
Lysobacter humi Lee et al. 2017
Lysobacter koreensis Lee et al. 2006
Lysobacter korlensis Zhang et al. 2011
Lysobacter lactosilyticus Wang et al. 2023
Lysobacter lacus Im et al. 2020
Lysobacter luteus Lucena et al. 2022
Lysobacter lycopersici Lin et al. 2015
Lysobacter maris Yoon 2016
Lysobacter mobilis Yang et al. 2015
Lysobacter niabensis Weon et al. 2007
Lysobacter niastensis Weon et al. 2007
Lysobacter novalis Singh et al. 2015
Lysobacter oculi Bai et al. 2019
Lysobacter olei Chaudhary et al. 2017
Lysobacter oligotrophicus Fukuda et al. 2013
Lysobacter oryzae Aslam et al. 2009
Lysobacter panacihumi Huo et al. 2021
Lysobacter panacisoli Choi et al. 2014
Lysobacter pedocola Jang et al. 2018
Lysobacter penaei Xu et al. 2021
Lysobacter pocheonensis Siddiqi and Im 2019
Lysobacter prati Fang et al. 2020
Lysobacter profundi Jin et al. 2020
Lysobacter psychrotolerans Luo et al. 2019
Lysobacter pythonis Busse et al. 2020
Lysobacter rhizophilus Yan et al. 2016
Lysobacter rhizosphaerae Singh et al. 2015
Lysobacter ruishenii Wang et al. 2011
Lysobacter sedimenti Zhang et al. 2022
Lysobacter sediminicola Siddiqi and Im 2016
Lysobacter segetis Ten et al. 2020
Lysobacter selenitireducens Mao et al. 2022
Lysobacter silvestris Margesin et al. 2018
Lysobacter silvisoli Zhang et al. 2019
Lysobacter solanacearum Kim et al. 2017
Lysobacter soli Srinivasan et al. 2010
Lysobacter solisilvae Kim et al. 2021
Lysobacter spongiae Choi et al. 2019
Lysobacter spongiicola Romanenko et al. 2008
Lysobacter tabacisoli Xiao et al. 2019
Lysobacter telluris Lee and Whang 2021
Lysobacter terrae Ngo et al. 2015
Lysobacter terrestris Woo and Kim 2022
Lysobacter terricola Kim et al. 2016
Lysobacter terrigena Li et al. 2020
Lysobacter tolerans (Rani et al. 2016) Margesin et al. 2018
Lysobacter tongrenensis Li et al. 2018
Lysobacter xanthus Kim et al. 2019
Lysobacter ximonensis Wang et al. 2009
Lysobacter xinjiangensis Liu et al. 2011
Lysobacter yangpyeongensis Weon et al. 2006
Metallibacterium Ziegler et al. 2013
Metallibacterium scheffleri Ziegler et al. 2013
Mizugakiibacter Kojima et al. 2014
Mizugakiibacter sediminis Kojima et al. 2014
Oleiagrimonas Fang et al. 2015
Oleiagrimonas citrea Yang et al. 2017
Oleiagrimonas soli Fang et al. 2015
Pseudolysobacter Wei et al. 2020
Pseudomarimonas Weerawongwiwat et al. 2021
Pseudomarimonas arenosa Weerawongwiwat et al. 2021
Pseudoxanthomonas Finkmann et al. 2000
Pseudoxanthomonas arseniciresistens Mohapatra et al. 2020
Pseudoxanthomonas broegbernensis Finkmann et al. 2000
Pseudoxanthomonas composti Lin et al. 2019
Pseudoxanthomonas dokdonensis (Yoon et al. 2006) Lee et al. 2008
Pseudoxanthomonas gei Zhang et al. 2014
Pseudoxanthomonas helianthi Kittiwongwattana and Thawai 2016
Pseudoxanthomonas humi Akter et al. 2016
Pseudoxanthomonas icgebensis Rani et al. 2010
Pseudoxanthomonas indica Kumari et al. 2011
Pseudoxanthomonas japonensis Thierry et al. 2004
Pseudoxanthomonas kalamensis Harada et al. 2006
Pseudoxanthomonas koreensis Yang et al. 2005
Pseudoxanthomonas mexicana Thierry et al. 2004
Pseudoxanthomonas spadix Young et al. 2007
Pseudoxanthomonas suwonensis Weon et al. 2006
Pseudoxanthomonas winnipegensis Bernard et al. 2020
Rehaibacterium Yu et al. 2013
Rehaibacterium terrae Yu et al. 2013
Silanimonas Lee et al. 2005
Silanimonas algicola Chun et al. 2017
Silanimonas lenta Lee et al. 2005
Silanimonas mangrovi Srinivas et al. 2013
Stenotrophomonas Palleroni and Bradbury 1993
Stenotrophomonas bentonitica Sánchez-Castro et al. 2017
Stenotrophomonas chelatiphaga Kaparullina et al. 2010
Stenotrophomonas geniculata (Wright 1895) Rudra and Gupta 2021
Stenotrophomonas humi Heylen et al. 2007
Stenotrophomonas indicatrix Weber et al. 2018
Stenotrophomonas koreensis Yang et al. 2006
Stenotrophomonas lactitubi Weber et al. 2018
Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993
Stenotrophomonas mori Deng et al. 2022
Stenotrophomonas nitritireducens Finkmann et al. 2000
Stenotrophomonas pavanii Ramos et al. 2011
Stenotrophomonas pennii Gilroy et al. 2021
Stenotrophomonas pictorum (Gray and Thornton 1928) Ouattara et al. 2017
Stenotrophomonas rhizophila Wolf et al. 2002
Stenotrophomonas sepilia Gautam et al. 2021
Stenotrophomonas terrae Heylen et al. 2007
Stenotrophomonas tumulicola Handa et al. 2016
Tahibacter Makk et al. 2014
Tahibacter amnicola Baek et al. 2023
Tahibacter aquaticus Makk et al. 2014
Tahibacter caeni Wu et al. 2015
Tahibacter harae Chen et al. 2023
Tahibacter soli Baek et al. 2023
Thermomonas Busse et al. 2002
Thermomonas alba Liu et al. 2022
Thermomonas aquatica Ju et al. 2019
Thermomonas beijingensis Guo et al. 2022
Thermomonas brevis Mergaert et al. 2003
Thermomonas carbonis Wang et al. 2014
Thermomonas flagellata Liu et al. 2022
Thermomonas fusca Mergaert et al. 2003
Thermomonas haemolytica Busse et al. 2002
Thermomonas hydrothermalis Alves et al. 2003
Thermomonas koreensis Kim et al. 2006
Thermomonas mangrovi Xu et al. 2023
Thermomonas paludicola Kim et al. 2023
Vulcaniibacterium Yu et al. 2014
Vulcaniibacterium thermophilum (Wei et al. 2013) Yu et al. 2014
Xanthomonas Dowson 1939
Xanthomonas albilineans (Ashby 1929) Dowson 1943
Xanthomonas alfalfae (ex Riker et al. 1935) Schaad et al. 2007
Xanthomonas arboricola Vauterin et al. 1995
Xanthomonas axonopodis Starr and Garces 1950
Xanthomonas bonasiae Mafakheri et al. 2022
Xanthomonas bromi Vauterin et al. 1995
Xanthomonas campestris (Pammel 1895) Dowson 1939
Xanthomonas cassavae (ex Wiehe and Dowson 1953) Vauterin et al. 1995
Xanthomonas citri (ex Hasse 1915) Gabriel et al. 1989
Xanthomonas codiaei Vauterin et al. 1995
Xanthomonas cucurbitae (ex Bryan 1926) Vauterin et al. 1995
Xanthomonas cynarae Trébaol et al. 2000
Xanthomonas dyei Young et al. 2010
Xanthomonas euroxanthea Martins et al. 2020
Xanthomonas euvesicatoria Jones et al. 2006
Xanthomonas floridensis Vicente et al. 2017
Xanthomonas fragariae Kennedy and King 1962
Xanthomonas fuscans Schaad et al. 2007
Xanthomonas hortorum Vauterin et al. 1995
Xanthomonas hyacinthi (ex Wakker 1883) Vauterin et al. 1995
Xanthomonas hydrangeae Dia et al. 2021
Xanthomonas indica Rana et al. 2022
Xanthomonas maliensis Triplett et al. 2015
Xanthomonas massiliensis Ndongo et al. 2017
Xanthomonas melonis Vauterin et al. 1995
Xanthomonas nasturtii Vicente et al. 2017
Xanthomonas oryzae (ex Ishiyama 1922) Swings et al. 1990
Xanthomonas perforans Jones et al. 2006
Xanthomonas phaseoli (ex Smith 1897) Gabriel et al. 1989
Xanthomonas pisi (ex Goto and Okabe 1958) Vauterin et al. 1995
Xanthomonas populi (ex Ridé 1958) Ridé and Ridé 1992
Xanthomonas prunicola López et al. 2018
Xanthomonas sacchari Vauterin et al. 1995
Xanthomonas sontii Bansal et al. 2019
Xanthomonas theicola Vauterin et al. 1995
Xanthomonas translucens (ex Jones et al. 1917) Vauterin et al. 1995
Xanthomonas vasicola Vauterin et al. 1995
Xanthomonas vesicatoria (ex Doidge 1920) Vauterin et al. 1995
Xanthomonas youngii Mafakheri et al. 2022
Xylella Wells et al. 1987
Pseudomonas boreopolis Gray and Thornton 1928
Xylella fastidiosa Wells et al. 1987
Xylella taiwanensis Su et al. 2016
Rhodanobacteraceae Naushad et al. 2015
Aerosticca Watanabe et al. 2020
Aerosticca soli Watanabe et al. 2020
Ahniella Hwang et al. 2018
Ahniella affigens Hwang et al. 2018
Aquimonas Saha et al. 2005
Aquimonas voraii Saha et al. 2005
Dokdonella Yoon et al. 2006
Dokdonella fugitiva Cunha et al. 2006
Dokdonella ginsengisoli Ten et al. 2009
Dokdonella immobilis Liu et al. 2013
Dokdonella koreensis Yoon et al. 2006
Dokdonella kunshanensis Li et al. 2013
Dokdonella soli Yoo et al. 2009
Dyella Xie and Yokota 2005
Dyella acidiphila Huang et al. 2021
Dyella acidisoli Chen et al. 2017
Dyella agri Chaudhary and Kim 2017
Dyella amyloliquefaciens Fu et al. 2019
Dyella caseinilytica Xia et al. 2017
Dyella choica Ou et al. 2019
Dyella dinghuensis Ou et al. 2019
Dyella flagellata Chen et al. 2017
Dyella flava Xia et al. 2017
Dyella ginsengisoli Jung et al. 2009
Dyella halodurans Cai et al. 2018
Dyella humi Chen et al. 2016
Dyella humicola Feng et al. 2023
Dyella japonica Xie and Yokota 2005
Dyella jejuensis Kim et al. 2015
Dyella jiangningensis Zhao et al. 2013
Dyella koreensis An et al. 2005
Dyella kyungheensis Son et al. 2013
Dyella lipolytica Tang et al. 2017
Dyella lutea Park et al. 2023
Dyella marensis Lee and Lee 2009
Dyella mobilis Xia et al. 2017
Dyella monticola Zhou et al. 2019
Dyella nitratireducens Chen et al. 2017
Dyella psychrodurans Zhou et al. 2019
Dyella sedimenti Gao et al. 2022
Dyella silvae Feng et al. 2023
Dyella silvatica Feng et al. 2023
Dyella soli Weon et al. 2009
Dyella solisilvae Gao et al. 2019
Dyella subtropica Feng et al. 2023
Dyella tabacisoli Li et al. 2019
Dyella telluris Huang et al. 2021
Dyella terrae Weon et al. 2009
Frateuria Swings et al. 1980
Dyella thiooxydans Anandham et al. 2011
Frateuria aurantia (ex Kondô and Ameyama 1958) Swings et al. 1980
Frateuria defendens Lidor et al. 2019
Frateuria edaphi Won et al. 2023
Frateuria flava Akter et al. 2021
Frateuria soli Won et al. 2023
Frateuria terrea Zhang et al. 2011
Fulvimonas Mergaert et al. 2002
Fulvimonas soli Mergaert et al. 2002
Fulvimonas yonginensis Ahn et al. 2014
Luteibacter Johansen et al. 2005
Luteibacter aegosomaticola Joe et al. 2023
Luteibacter aegosomatis Joe et al. 2023
Luteibacter anthropi Kämpfer et al. 2009
Luteibacter flocculans Friedrich et al. 2023
Luteibacter jiangsuensis Wang et al. 2010
Luteibacter pinisoli Akter and Huq 2018
Luteibacter rhizovicinus Johansen et al. 2005
Luteibacter yeojuensis (Kim et al. 2006) Kämpfer et al. 2009
Pinirhizobacter Xue et al. 2022
Pinirhizobacter soli Xue et al. 2022
Pseudofulvimonas Kämpfer et al. 2010
Pseudofulvimonas gallinarii Kämpfer et al. 2010
Rhodanobacter Nalin et al. 1999
Rhodanobacter aciditrophus Koh et al. 2015
Rhodanobacter caeni Woo et al. 2012
Rhodanobacter denitrificans Prakash et al. 2012
Rhodanobacter fulvus Im et al. 2005
Rhodanobacter ginsengisoli Weon et al. 2007
Rhodanobacter glycinis Madhaiyan et al. 2014
Rhodanobacter humi Dahal and Kim 2017
Rhodanobacter hydrolyticus Dahal et al. 2018
Rhodanobacter koreensis Won et al. 2015
Rhodanobacter lindaniclasticus Nalin et al. 1999
Rhodanobacter panaciterrae Wang et al. 2011
Rhodanobacter rhizosphaerae Cho et al. 2017
Rhodanobacter soli Bui et al. 2010
Rhodanobacter spathiphylli De Clercq et al. 2006
Rhodanobacter terrae Weon et al. 2007
Rhodanobacter thiooxydans Lee et al. 2007
Rhodanobacter umsongensis Kim et al. 2013
Rhodanobacter xiangquanii Zhang et al. 2010
Rudaea Weon et al. 2009
Gynumella flava Aslam et al. 2010
Rudaea cellulosilytica Weon et al. 2009
Data type count
  • 0
    Genome
  • 0
    16S rRNA