Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Oceanospirillales Garrity et al. 2005
Alcanivoracaceae Golyshin et al. 2005
Alcanivorax Yakimov et al. 1998
Alcanivorax borkumensis Yakimov et al. 1998
Alcanivorax hongdengensis Wu et al. 2009
Alcanivorax jadensis (Bruns and Berthe-Corti 1999) Fernández-Martínez et al. 2003
Alcanivorax nanhaiticus Lai et al. 2016
Alcanivorax profundi Liu et al. 2019
Alcanivorax quisquiliarum An et al. 2023
Alcanivorax sediminis Liao et al. 2020
Alcanivorax xiamenensis Lai et al. 2023
Alloalcanivorax Rai et al. 2023
Alloalcanivorax balearicus (Rivas et al. 2007) Rai et al. 2023
Alloalcanivorax dieselolei (Liu and Shao 2005) Rai et al. 2023
Alloalcanivorax gelatiniphagus (Kwon et al. 2015) Rai et al. 2023
Alloalcanivorax marinus (Lai et al. 2013) Rai et al. 2023
Alloalcanivorax mobilis (Yang et al. 2018) Rai et al. 2023
Alloalcanivorax profundimaris (Dong et al. 2021) Rai et al. 2023
Alloalcanivorax venustensis (Fernández-Martínez et al. 2003) Rai et al. 2023
Alloalcanivorax xenomutans (Rahul et al. 2014) Rai et al. 2023
Isoalcanivorax Rai et al. 2023
Alcanivorax limicola Zhu et al. 2021
Isoalcanivorax indicus (Song et al. 2018) Rai et al. 2023
Isoalcanivorax pacificus (Lai et al. 2011) Rai et al. 2023
Ketobacter Kim et al. 2018
Ketobacter alkanivorans Kim et al. 2018
Ketobacter nezhaii Li et al. 2020
Pelagibaculum Knobloch et al. 2019
Pelagibaculum spongiae Knobloch et al. 2019
Balneatrichaceae Krishnan et al. 2019
Balneatrix Dauga et al. 1993
Balneatrix alpica Dauga et al. 1993
Pokkaliibacter Krishnan et al. 2019
Pokkaliibacter plantistimulans Krishnan et al. 2019
Gynuellaceae Kevbrin et al. 2020
Gynuella Chung et al. 2015
Gynuella sunshinyii Chung et al. 2015
Halomarinus Savoie et al. 2021
Halomarinus kaneohensis Savoie et al. 2021
Halomarinus litoralis Savoie et al. 2021
Halomarinus pommedorensis Savoie et al. 2021
Halomonadaceae Franzmann et al. 1989
Aidingimonas Wang et al. 2009
Aidingimonas halophila Wang et al. 2009
Aidingimonas lacisalsi Guan et al. 2020
Carnimonas Garriga et al. 1998
Carnimonas nigrificans Garriga et al. 1998
Chromohalobacter Ventosa et al. 1989
Chromohalobacter beijerinckii (Hof 1935) Peçonek et al. 2006
Chromohalobacter canadensis (Huval et al. 1996) Arahal et al. 2001
Chromohalobacter israelensis (Huval et al. 1996) Arahal et al. 2001
Chromohalobacter japonicus Sánchez-Porro et al. 2007
Chromohalobacter marismortui (ex Elazari-Volcani 1940) Ventosa et al. 1989
Chromohalobacter moromii Lülf et al. 2022
Chromohalobacter salexigens Arahal et al. 2001
Chromohalobacter sarecensis Quillaguamán et al. 2004
Cobetia Arahal et al. 2002
Cobetia amphilecti Romanenko et al. 2013
Cobetia crustatorum Kim et al. 2010
Cobetia litoralis Romanenko et al. 2013
Cobetia marina (Cobet et al. 1970) Arahal et al. 2002
Cobetia pacifica Romanenko et al. 2013
Evansia Kuechler et al. 2013
Evansia muelleri Kuechler et al. 2013
Halomonas Vreeland et al. 1980
Halomonas aerodenitrificans Wang and Shao 2021
Halomonas aestuarii Koh et al. 2017
Halomonas aidingensis Liu et al. 2011
Halomonas alimentaria Yoon et al. 2002
Halomonas alkaliantarctica Poli et al. 2011
Halomonas alkalicola Tang et al. 2017
Halomonas alkaliphila Romano et al. 2007
Halomonas alkalisoli Shang et al. 2022
Halomonas alkalitolerans Wang et al. 2011
Halomonas almeriensis Martínez-Checa et al. 2005
Halomonas andesensis Guzmán et al. 2010
Halomonas anticariensis Martínez-Cánovas et al. 2004
Halomonas antri So et al. 2022
Halomonas aquamarina (ZoBell and Upham 1944) Dobson and Franzmann 1996
Halomonas arcis Xu et al. 2007
Halomonas axialensis Kaye et al. 2004
Halomonas azerbaijanica Kazemi et al. 2021
Halomonas azerica Wenting et al. 2021
Halomonas bachuensis Xiao et al 2021
Halomonas beimenensis Wang et al. 2012
Halomonas binhaiensis Li et al. 2022
Halomonas boliviensis Quillaguamán et al. 2004
Halomonas borealis Diéguez et al. 2020
Halomonas campaniensis Romano et al. 2005
Halomonas campisalis Mormile et al. 2000
Halomonas caseinilytica Wu et al. 2008
Halomonas cerina González-Domenech et al. 2008
Halomonas chromatireducens Shapovalova et al. 2009
Halomonas cibimaris Jeong et al. 2013
Halomonas coralii Vidal et al. 2019
Halomonas cupida (Baumann et al. 1972) Dobson and Franzmann 1996
Halomonas daqiaonensis Qu et al. 2011
Halomonas daqingensis Wu et al. 2008
Halomonas denitrificans Kim et al. 2007
Halomonas desiderata Berendes et al. 1997
Halomonas diversa Wang et al. 2021
Halomonas dongshanensis Lin et al. 2023
Halomonas elongata Vreeland et al. 1980
Halomonas endophytica Chen et al. 2018
Halomonas ethanolica Wang and Shao 2021
Halomonas eurihalina (Quesada et al. 1990) Mellado et al. 1995
Halomonas faecis Liu et al. 2022
Halomonas flava Chen et al. 2012
Halomonas fontilapidosi González-Domenech et al. 2009
Halomonas garicola Jung et al. 2016
Halomonas getboli Yoo et al. 2022
Halomonas glaciei Reddy et al. 2003
Halomonas gomseomensis Kim et al. 2007
Halomonas gudaonensis Wang et al. 2007
Halomonas halmophila (Elazari-Volcani 1940) Franzmann et al. 1989
Halomonas halocynthiae Romanenko et al. 2002
Halomonas halodenitrificans (Robinson and Gibbons 1952) Dobson and Franzmann 1996
Halomonas halophila (Quesada et al. 1984) Dobson and Franzmann 1996
Halomonas hamiltonii Kim et al. 2010
Halomonas heilongjiangensis Dou et al. 2015
Halomonas huangheensis Miao et al. 2014
Halomonas humidisoli Liu et al. 2021
Halomonas hydrothermalis Kaye et al. 2004
Halomonas icarae Pandiyan et al. 2021
Halomonas ilicicola Arenas et al. 2009
Halomonas janggokensis Kim et al. 2007
Halomonas jeotgali Kim et al. 2011
Halomonas jincaotanensis Bu et al. 2022
Halomonas johnsoniae Kim et al. 2010
Halomonas kenyensis Boltyanskaya et al. 2008
Halomonas koreensis Lim et al. 2004
Halomonas korlensis Li et al. 2008
Halomonas kribbensis Jeon et al. 2007
Halomonas lactosivorans Ming et al. 2020
Halomonas lionensis Gaboyer et al. 2014
Halomonas litopenaei Xue et al. 2018
Halomonas lutea Wang et al. 2008
Halomonas lutescens Wang et al. 2016
Halomonas lysinitropha Ramezani et al. 2020
Halomonas magadiensis Duckworth et al. 2000
Halomonas malpeensis Kämpfer et al. 2018
Halomonas maris Qiu et al. 2021
Halomonas massiliensis Seck et al. 2016
Halomonas maura Bouchotroch et al. 2001
Halomonas meridiana James et al. 1990
Halomonas mongoliensis Boltyanskaya et al. 2008
Halomonas montanilacus Lu et al. 2020
Halomonas muralis Heyrman et al. 2002
Halomonas nanhaiensis Long et al. 2013
Halomonas neptunia Kaye et al. 2004
Halomonas nigrificans Oguntoyinbo et al. 2018
Halomonas niordiana Diéguez et al. 2020
Halomonas nitrilica Chmura et al. 2021
Halomonas nitroreducens González-Domenech et al. 2008
Halomonas olivaria Amouric et al. 2014
Halomonas organivorans García et al. 2004
Halomonas pacifica (Baumann et al. 1972) Dobson and Franzmann 1996
Halomonas pantelleriensis Romano et al. 1997
Halomonas pellis Li et al. 2020
Halomonas piezotolerans Yan et al. 2020
Halomonas populi Xu et al. 2022
Halomonas profundi Wang et al. 2022
Halomonas qiaohouensis Wang et al. 2015
Halomonas qijiaojingensis Chen et al. 2012
Halomonas radicis Navarro-Torre et al. 2020
Halomonas ramblicola Luque et al. 2012
Halomonas rifensis Amjres et al. 2011
Halomonas rituensis Gao et al. 2020
Halomonas sabkhae Kharroub et al. 2008
Halomonas saccharevitans Xu et al. 2007
Halomonas salicampi Lee et al. 2015
Halomonas salifodinae Wang et al. 2008
Halomonas salina (Valderrama et al. 1991) Dobson and Franzmann 1996
Halomonas salinarum Yin et al. 2022
Halomonas salipaludis Xing et al. 2021
Halomonas saliphila Gan et al. 2018
Halomonas sambharensis Kushwaha et al. 2020
Halomonas saudii Bibi et al. 2017
Halomonas sedimenti Qiu et al. 2021
Halomonas sediminicola Lee et al. 2016
Halomonas sediminis Huang et al. 2008
Halomonas shantousis Jiang et al. 2014
Halomonas shengliensis Wang et al. 2007
Halomonas sinaiensis Romano et al. 2011
Halomonas smyrnensis Poli et al. 2013
Halomonas socia Cao et al. 2020
Halomonas songnenensis Jiang et al. 2014
Halomonas stenophila Llamas et al. 2011
Halomonas stevensii Kim et al. 2010
Halomonas subglaciescola Franzmann et al. 1987
Halomonas subterranea Xu et al. 2007
Halomonas sulfidaeris Kaye et al. 2004
Halomonas sulfidoxydans Wang and Shao 2021
Halomonas tabrizica Vahed et al. 2020
Halomonas taeanensis Lee et al. 2005
Halomonas tianxiuensis Wang and Shao 2021
Halomonas tibetensis Lu et al. 2018
Halomonas titanicae Mann et al. 2010
Halomonas urmiana Khan et al. 2020
Halomonas urumqiensis Zhang et al. 2016
Halomonas utahensis (Fendrich 1989) Sorokin and Tindall 2006
Halomonas ventosae Martínez-Cánovas et al. 2004
Halomonas venusta (Baumann et al. 1972) Dobson and Franzmann 1996
Halomonas vilamensis Menes et al. 2011
Halomonas xianhensis Zhao et al. 2012
Halomonas xinjiangensis Guan et al. 2010
Halomonas zhangzhouensis Wang and Shao 2021
Halomonas zhanjiangensis Chen et al. 2009
Halomonas zhaodongensis Jiang et al. 2013
Halomonas zhuhanensis Gao et al. 2020
Halomonas zincidurans Xu et al. 2013
Halotalea Ntougias et al. 2007
Halotalea alkalilenta Ntougias et al. 2007
Kushneria Sánchez-Porro et al. 2009
Kushneria aurantia Sánchez-Porro et al. 2009
Kushneria avicenniae (Soto-Ramírez et al. 2007) Sánchez-Porro et al. 2009
Kushneria endophytica Navarro-Torre et al. 2018
Kushneria indalinina (Cabrera et al. 2007) Sánchez-Porro et al. 2009
Kushneria konosiri Yun et al. 2017
Kushneria marisflavi (Yoon et al. 2001) Sánchez-Porro et al. 2009
Kushneria pakistanensis Bangash et al. 2015
Kushneria phosphatilytica Du et al. 2021
Kushneria phyllosphaerae Navarro-Torre et al. 2018
Kushneria sinocarnis Zou and Wang 2010
Larsenimonas León et al. 2015
Larsenimonas rhizosphaerae Lee and Kim 2023
Larsenimonas salina León et al. 2015
Larsenimonas suaedae Xia et al. 2016
Marinospirillum Satomi et al. 1998
Marinospirillum alkaliphilum Zhang et al. 2002
Marinospirillum celere Namsaraev et al. 2009
Marinospirillum insulare Satomi et al. 2004
Marinospirillum megaterium Satomi et al. 1998
Marinospirillum minutulum (Watanabe 1959) Satomi et al. 1998
Marinospirillum perlucidum Wang et al. 2020
Modicisalibacter Ben Ali Gam et al. 2007
Modicisalibacter tunisiensis Ben Ali Gam et al. 2007
Phytohalomonas Liu et al. 2019
Phytohalomonas tamaricis Liu et al. 2019
Pistricoccus Xu et al. 2017
Pistricoccus aurantiacus Xu et al. 2017
Portiera Thao and Baumann 2004
Portiera aleyrodidarum Thao and Baumann 2004
Salinicola Anan'ina et al. 2008
Salinicola acroporae Lepcha et al. 2015
Salinicola aestuarinus Fidalgo et al. 2019
Salinicola corii Li et al. 2021
Salinicola endophyticus Fidalgo et al. 2019
Salinicola halimionae Fidalgo et al. 2019
Salinicola halophilus de la Haba et al. 2010
Salinicola halophyticus Fidalgo et al. 2019
Salinicola lusitanus Fidalgo et al. 2019
Salinicola peritrichatus Huo et al. 2013
Salinicola rhizosphaerae Raju et al. 2016
Salinicola salarius (Kim et al. 2007) de la Haba et al. 2010
Salinicola socius Anan'ina et al. 2008
Salinicola tamaricis Zhao et al. 2017
Salinicola zeshunii Cao et al. 2012
Terasakiispira Zepeda et al. 2015
Zymobacter Okamoto et al. 1995
Zymobacter palmae Okamoto et al. 1995
Litorivicinaceae Deshmukh and Oren 2023
Litorivicinus Deshmukh and Oren 2023
Litorivicinus lipolyticus (Kim et al. 2007) Deshmukh and Oren 2023
Litorivicinus marinus (Choi et al. 2010) Deshmukh and Oren 2023
Natronospirillaceae Kevbrin et al. 2020
Natronospirillum Kevbrin et al. 2020
Natronospirillum operosum Kevbrin et al. 2020
Salinispirillum Shahinpei et al. 2014
Salinispirillum marinum Shahinpei et al. 2014
Oceanospirillaceae Garrity et al. 2005
Aliamphritea Yamano et al. 2023
Aliamphritea ceti (Kim et al. 2014) Yamano et al. 2023
Aliamphritea hakodatensis Yamano et al. 2023
Aliamphritea spongicola (Jang et al. 2015) Yamano et al. 2023
Amphritea Gärtner et al. 2008
Amphritea atlantica Gärtner et al. 2008
Amphritea balenae Miyazaki et al. 2008
Amphritea japonica Miyazaki et al. 2008
Amphritea opalescens Han et al. 2019
Amphritea pacifica Cai et al. 2021
Bacterioplanes Wang et al. 2016
Bacterioplanes sanyensis Wang et al. 2016
Bacterioplanoides Wang et al. 2016
Bacterioplanoides pacificum Wang et al. 2016
Bermanella Pinhassi et al. 2009
Bermanella marisrubri Pinhassi et al. 2009
Corallomonas Chen et al. 2013
Corallomonas stylophorae Chen et al. 2013
Litoribacillus Zhao et al. 2014
Litoribacillus peritrichatus Zhao et al. 2014
Litoribrevibacter Li et al. 2015
Litoribrevibacter albus Li et al. 2015
Litoribrevibacter euphylliae Sheu et al. 2018
Maribrevibacterium Mo et al. 2021
Marinobacterium González et al. 1997
Marinobacterium aestuarii Bae et al. 2018
Marinobacterium alkalitolerans Pinnaka et al. 2021
Marinobacterium arenosum Lee et al. 2022
Marinobacterium boryeongense Kang et al. 2019
Marinobacterium coralli Chimetto et al. 2011
Marinobacterium halophilum Chang et al. 2007
Marinobacterium iners (Iizuka and Komagata 1964) Tindall 2020
Marinobacterium jannaschii (Bowditch et al. 1984) Satomi et al. 2002
Marinobacterium litorale Kim et al. 2007
Marinobacterium lutimaris Kim et al. 2010
Marinobacterium mangrovicola Alfaro-Espinoza and Ullrich 2014
Marinobacterium marisflavi Kim et al. 2014
Marinobacterium maritimum Kim et al. 2009
Marinobacterium profundum Hwang et al. 2016
Marinobacterium ramblicola Durán-Viseras et al. 2022
Marinobacterium rhizophilum Kim et al. 2008
Marinobacterium sedimentorum Romanenko et al. 2023
Marinobacterium stanieri (Baumann et al. 1983) Satomi et al. 2002
Marinomonas van Landschoot and De Ley 1984
Marinomonas agarivorans Yu et al. 2020
Marinomonas alcarazii Lucas-Elío et al. 2011
Marinomonas algarum Xue et al. 2022
Marinomonas algicida Kristyanto et al. 2017
Marinomonas algicola Sun et al. 2021
Marinomonas aquimarina Macián et al. 2005
Marinomonas aquiplantarum Lucas-Elío et al. 2011
Marinomonas arctica Zhang et al. 2008
Marinomonas arenicola Romanenko et al. 2009
Marinomonas atlantica Lasa et al. 2016
Marinomonas balearica Espinosa et al. 2010
Marinomonas blandensis Arahal et al. 2016
Marinomonas brasilensis Chimetto et al. 2011
Marinomonas colpomeniae Sun et al. 2021
Marinomonas communis (Baumann et al. 1972) van Landschoot and De Ley 1984
Marinomonas dokdonensis Yoon et al. 2005
Marinomonas epiphytica Ojha et al. 2017
Marinomonas flavescens Hu et al. 2019
Marinomonas foliarum Lucas-Elío et al. 2011
Marinomonas fungiae Kumari et al. 2014
Marinomonas gallaica Lasa et al. 2016
Marinomonas hwangdonensis Jung et al. 2012
Marinomonas lutimaris Gao et al. 2022
Marinomonas mangrovi Zhang and Margesin 2015
Marinomonas mediterranea Solano and Sanchez-Amat 1999
Marinomonas ostreistagni Lau et al. 2006
Marinomonas piezotolerans Yu et al. 2019
Marinomonas polaris Gupta et al. 2006
Marinomonas pollencensis Espinosa et al. 2010
Marinomonas pontica Ivanova et al. 2005
Marinomonas posidonica Lucas-Elío et al. 2011
Marinomonas primoryensis Romanenko et al. 2003
Marinomonas profundi Li et al. 2020
Marinomonas profundimaris Bai et al. 2015
Marinomonas rhizomae Lucas-Elío et al. 2011
Marinomonas shanghaiensis Wei et al. 2019
Marinomonas spartinae Lucena et al. 2016
Marinomonas ushuaiensis Prabagaran et al. 2005
Marinomonas vaga (Baumann et al. 1972) van Landschoot and De Ley 1984
Marinomonas vulgaris Ying et al. 2022
Motiliproteus Wang et al. 2015
Motiliproteus coralliicola Wang et al. 2018
Motiliproteus sediminis Wang et al. 2015
Neptuniibacter Arahal et al. 2007
Neptuniibacter caesariensis Arahal et al. 2007
Neptuniibacter halophilus Chen et al. 2012
Neptuniibacter marinus Diéguez et al. 2017
Neptuniibacter pectenicola Diéguez et al. 2017
Neptunomonas Hedlund et al. 1999
Neptunomonas acidivorans Yang et al. 2014
Neptunomonas antarctica Zhang et al. 2010
Neptunomonas concharum Lee et al. 2012
Neptunomonas japonica Miyazaki et al. 2008
Neptunomonas marina Chen et al. 2020
Neptunomonas naphthovorans Hedlund et al. 1999
Neptunomonas phycophila Frommlet et al. 2015
Neptunomonas qingdaonensis Liu et al. 2013
Nitrincola Dimitriu et al. 2005
Nitrincola alkalilacustris Borsodi et al. 2017
Nitrincola alkalisediminis Joshi et al. 2016
Nitrincola iocasae Zhang et al. 2020
Nitrincola lacisaponensis Dimitriu et al. 2005
Nitrincola schmidtii Borsodi et al. 2017
Nitrincola tapanii Joshi et al. 2020
Nitrincola tibetensis Phurbu et al. 2019
Oceanobacter Satomi et al. 2002
Oceanobacter kriegii (Bowditch et al. 1984) Satomi et al. 2002
Oceanobacter mangrovi Huang et al. 2022
Oceanospirillum Hylemon et al. 1973
Oceanospirillum beijerinckii (Williams and Rittenberg 1957) Hylemon et al. 1973
Oceanospirillum linum (Williams and Rittenberg 1957) Hylemon et al. 1973
Oceanospirillum maris Hylemon et al. 1973
Oceanospirillum multiglobuliferum (Terasaki 1973) Terasaki 1979
Oceanospirillum nioense Krishna et al. 2013
Oceanospirillum sanctuarii Sidhu et al. 2017
Oceanospirillum sediminis Zhao et al. 2022
Oleispira Yakimov et al. 2003
Oleispira antarctica Yakimov et al. 2003
Oleispira lenta Wang et al. 2012
Parathalassolituus Chen et al. 2023
Parathalassolituus penaei Chen et al. 2023
Pelagitalea Lee et al. 2014
Pelagitalea pacifica Lee et al. 2014
Pontibacterium Hyeon et al. 2017
Pontibacterium granulatum Hyeon et al. 2017
Profundimonas Cao et al. 2013
Profundimonas piezophila Cao et al. 2013
Spongiispira Kaesler et al. 2008
Oceaniserpentilla haliotis Schlösser et al. 2008
Spongiispira norvegica Kaesler et al. 2008
Thalassolituus Yakimov et al. 2004
Thalassolituus alkanivorans Wei et al. 2022
Thalassolituus marinus Choi and Cho 2013
Thalassolituus maritimus Dong et al. 2023
Thalassolituus oleivorans Yakimov et al. 2004
Thalassolituus pacificus Dong et al. 2023
Venatoribacter Saeedi et al. 2023
Venatoribacter cucullus Saeedi et al. 2023
Pleioneaceae Wang et al. 2020
Aliikangiella Wang et al. 2015
Aliikangiella coralliicola Wang et al. 2020
Aliikangiella marina Wang et al. 2015
Pleionea Fagervold et al. 2013
Pleionea mediterranea Fagervold et al. 2013
Pleionea sediminis Luo et al. 2019
Pseudospirillum Satomi et al. 2002
Pseudospirillum japonicum (Watanabe 1959) Satomi et al. 2002
Saccharospirillaceae Kevbrin et al. 2020
Reinekea Romanenko et al. 2004
Reinekea aestuarii Choi and Cho 2010
Reinekea blandensis Pinhassi et al. 2007
Reinekea forsetii Hahnke 2013
Reinekea marina Kang et al. 2016
Reinekea marinisedimentorum Romanenko et al. 2004
Reinekea thalattae Kim et al. 2021
Saccharospirillum Labrenz et al. 2003
Saccharospirillum aestuarii Choi et al. 2011
Saccharospirillum alexandrii Yang et al. 2020
Saccharospirillum correiae Fidalgo et al. 2017
Saccharospirillum impatiens Labrenz et al. 2003
Saccharospirillum mangrovi Zhang et al. 2018
Saccharospirillum salsuginis Chen et al. 2009
Salinibius Ling et al. 2020
Salinibius halmophilus Ling et al. 2020
Data type count
  • 0
    Genome
  • 0
    16S rRNA