Taxonomy

This complete taxonomic hierarchy of Bacteria and Archaea was manually constructed by the EzBioCloud team using numerous maximum likelihood phylogenetic trees based on 16S sequences.
Root;Bacteria;Proteobacteria;Gammaproteobacteria
Thiotrichales Garrity et al. 2005
AY426613_f
AY426613_g
AY426613_s
EU246816_s
GU197425_s
Beggiatoaceae Migula 1894
AF110275_g
AF110275_s
AF110276_g
AF110276_s
AF110277_g
AF110277_s
Allobeggiatoa Hinck et al. 2011
Allobeggiatoa salina Hinck et al. 2011
Beggiatoa Trevisan 1842
Beggiatoa alba (Vaucher 1803) Trevisan 1845
Beggiatoa leptomitoformis Dubinina et al. 2017
EU015402_g
EU015402_s
GQ355044_g
GQ355044_s
GU302488_g
FR847880_s
GU302488_s
Isobeggiatoa Salman et al. 2011
FJ875195_s
FN561862_s
Isobeggiatoa divolgata Salman et al. 2011
JQ738927_g
JQ738927_s
Maribeggiatoa Salman et al. 2011
Maribeggiatoa vulgaris Salman et al. 2011
Marithioploca Salman et al. 2011
BOGUAY_s
JN793554_s
Marithioploca araucae Salman et al. 2011
Marithrix Salman et al. 2011
Marithrix sessilis Salman et al. 2011
Parabeggiatoa Salman et al. 2011
FJ875198_s
Parabeggiatoa communis Salman et al. 2011
Thioflexithrix Gureeva et al. 2019
FJ516903_s
Thioflexithrix psekupsensis Gureeva et al. 2019
Thiomargarita Schulz et al. 1999
Thiomargarita joergensenii Salman et al. 2011
Thiomargarita namibiensis Schulz et al. 1999
Thiomargarita nelsonii Salman et al. 2011
Thiophysa Salman et al. 2011
Thiophysa hinzei Salman et al. 2011
Thiopilula Salman et al. 2011
Thiopilula aggregata Salman et al. 2011
Thioploca Lauterborn 1907
Thioploca ingrica (ex Visloukh 1911) Maier 1984
Venteria Fonseca et al. 2017
Venteria ishoeyi Fonseca et al. 2017
Endecteinascidia_f
Endecteinascidia Moss et al. 2003
Endecteinascidia fromenterensis Moss et al. 2003
EU400612_f
EU400612_g
EU400612_s
Fastidiosibacteraceae Xiao et al. 2018
Caedibacter Preer and Preer 1982
Caedibacter taeniospiralis (ex Preer et al. 1974) Preer and Preer 1982
Cysteiniphilum Liu et al. 2017
Cysteiniphilum halobium Xiao et al. 2019
Cysteiniphilum litorale Liu et al. 2017
Cysteiniphilum marinum Luo et al. 2022
PAC001795_s
PAC001937_s
PAC001958_s
Facilibium Xiao et al. 2019
Facilibium subflavum Xiao et al. 2019
Fangia Lau et al. 2007
Fangia hongkongensis Lau et al. 2007
JX878960_s
Fastidiosibacter Xiao et al. 2018
Fastidiosibacter lacustris Xiao et al. 2018
FJ425613_g
FJ425613_s
GU118319_g
GU118319_s
HQ672214_g
HQ672214_s
FJ717235_f
FJ717235_g
FJ717235_s
Francisellaceae Sjöstedt 2005
Allofrancisella Qu et al. 2016
Allofrancisella frigidaquae Qu et al. 2016
Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016
Allofrancisella inopinata Qu et al. 2016
Francisella Dorofe'ev 1947
CP009574_s
Francisella adeliensis Vallesi et al. 2019
Francisella asiatica Mikalsen and Colquhoun 2009
Francisella frigiditurris Challacombe et al. 2017
Francisella halioticida Brevik et al. 2012
Francisella hispaniensis Huber et al. 2010
Francisella noatunensis (Mikalsen et al. 2007) Ottem et al. 2009
Francisella opportunistica Dietrich et al. 2020
Francisella orientalis (Ottem et al. 2009) Ramirez-Paredes et al. 2020
Francisella persica (Suitor and Weiss 1961) Larson et al. 2016
Francisella philomiragia (Jensen et al. 1969) Hollis et al. 1990
Francisella salimarina Li et al. 2020
Francisella tularensis (McCoy and Chapin 1912) Dorofeev 1947
Francisella uliginis Challacombe et al. 2017
GU235586_s
LVCE_s
PAC001940_s
VXKQ_s
Pseudofrancisella Zheng et al. 2019
Pseudofrancisella aestuarii Zheng et al. 2019
GU941086_f
GU941086_g
GU941086_s
JN233060_f
JN233060_g
AACY023372270_s
GQ350623_s
JN233060_s
JQ062683_f
JQ062683_g
JQ062683_s
JQ716320_f
JQ716320_g
JQ716320_s
Leucothrix_f
Cocleimonas Tanaka et al. 2011
AB440174_s
AB440176_s
AB476175_s
AB476181_s
AB476220_s
Cocleimonas flava Tanaka et al. 2011
EU107481_s
FJ712487_s
FN658699_s
GU197434_s
JN256006_s
JN256007_s
JN662227_s
JN662236_s
FM165248_g
AB476246_s
EU107484_s
FM165248_s
GU197443_s
HQ153994_s
FR670400_g
AB476176_s
FR670400_s
GU369918_s
JQ287093_s
Leucothrix Oersted 1844
GQ274282_s
HQ203964_s
Leucothrix arctica Baek et al. 2018
Leucothrix mucor Oersted 1844
Leucothrix pacifica Zhang et al. 2015
Leucothrix sargassi Liu et al. 2019
Piscirickettsiaceae Fryer and Lannan 2005
Piscirickettsia Fryer et al. 1992
Piscirickettsia salmonis Fryer et al. 1992
Sulfurivirga Takai et al. 2006
DQ513099_s
Sulfurivirga caldicuralii Takai et al. 2006
Thiofilaceae Boden and Scott 2018
Thiofilum Boden and Scott 2018
Thiofilum flexile (Aruga et al. 2002) Boden and Scott 2018
Thiothrix defluvii Howarth et al. 1999
Thiolineaceae Boden and Scott 2018
Thiolinea Boden and Scott 2018
Thiolinea disciformis (Aruga et al. 2002) Boden and Scott 2018
Thiothrix eikelboomii Howarth et al. 1999
Thiotrichaceae Garrity et al. 2005
Thiothrix Winogradsky 1888
AB166733_s
AM490763_s
AM490765_s
EF467498_s
FJ769459_s
JF733408_s
Thiothrix caldifontis Chernousova et al. 2009
Thiothrix fructosivorans Howarth et al. 1999
Thiothrix lacustris Chernousova et al. 2009
Thiothrix litoralis Ravin et al. 2022
Thiothrix nivea (Rabenhorst 1865) Winogradsky 1888
Thiothrix subterranea Ravin et al. 2023
Thiothrix unzii Howarth et al. 1999
Thiothrix winogradskyi Ravin et al. 2023
Data type count
  • 0
    Genome
  • 0
    16S rRNA